FFCP PHASE1:Hg19::chr5:180017205..180017215,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr5:180017205..180017215,- | |||
|coexpression_cluster_id=C365 | |coexpression_cluster_id=C365 | ||
|description=CAGE_peak_at_chr5:180017205..180017215,- | |description=CAGE_peak_at_chr5:180017205..180017215,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0008947;2.96e-10;29 | |ontology_enrichment_development_v019=UBERON:0008947;2.96e-10;29 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003127!3.44e-25!2;UBERON:0000341!1.15e-24!2;UBERON:0001736!4.23e-13!1;UBERON:0006298!4.23e-13!1;UBERON:0002171!5.38e-13!1;UBERON:0006518!5.38e-13!1;UBERON:0008949!5.38e-13!1;UBERON:0000101!5.38e-13!1;UBERON:0002167!5.38e-13!1;UBERON:0001301!7.68e-13!1;UBERON:0002372!9.73e-13!1;UBERON:0001961!9.73e-13!1;UBERON:0001744!9.73e-13!1;UBERON:0001735!9.73e-13!1;UBERON:0000078!1.25e-10!18;UBERON:0001004!1.24e-09!72;UBERON:0000166!3.84e-09!21;UBERON:0007023!6.24e-09!115;UBERON:0001044!7.33e-09!6;UBERON:0003293!7.33e-09!6;UBERON:0003294!7.33e-09!6;UBERON:0010047!7.33e-09!6;UBERON:0000167!7.33e-09!6;UBERON:0003126!7.30e-08!7;UBERON:0001005!7.30e-08!7;UBERON:0000065!1.19e-07!53;UBERON:0001829!3.48e-07!2;UBERON:0000165!6.68e-07!28;UBERON:0000930!6.68e-07!28;UBERON:0001041!7.72e-07!98 | |ontology_enrichment_uberon=UBERON:0003127!3.44e-25!2;UBERON:0000341!1.15e-24!2;UBERON:0001736!4.23e-13!1;UBERON:0006298!4.23e-13!1;UBERON:0002171!5.38e-13!1;UBERON:0006518!5.38e-13!1;UBERON:0008949!5.38e-13!1;UBERON:0000101!5.38e-13!1;UBERON:0002167!5.38e-13!1;UBERON:0001301!7.68e-13!1;UBERON:0002372!9.73e-13!1;UBERON:0001961!9.73e-13!1;UBERON:0001744!9.73e-13!1;UBERON:0001735!9.73e-13!1;UBERON:0000078!1.25e-10!18;UBERON:0001004!1.24e-09!72;UBERON:0000166!3.84e-09!21;UBERON:0007023!6.24e-09!115;UBERON:0001044!7.33e-09!6;UBERON:0003293!7.33e-09!6;UBERON:0003294!7.33e-09!6;UBERON:0010047!7.33e-09!6;UBERON:0000167!7.33e-09!6;UBERON:0003126!7.30e-08!7;UBERON:0001005!7.30e-08!7;UBERON:0000065!1.19e-07!53;UBERON:0001829!3.48e-07!2;UBERON:0000165!6.68e-07!28;UBERON:0000930!6.68e-07!28;UBERON:0001041!7.72e-07!98 | ||
|ontology_enrichment_uberon_v019=UBERON:0003127;4.61e-131;2!UBERON:0003126;1.49e-38;7!UBERON:0001005;1.49e-38;7!UBERON:0007196;1.04e-18;15!UBERON:0001558;1.04e-18;15!UBERON:0005181;2.42e-07;35!UBERON:0005178;4.32e-07;34!UBERON:0000072;4.32e-07;37!UBERON:0002224;4.32e-07;34 | |ontology_enrichment_uberon_v019=UBERON:0003127;4.61e-131;2!UBERON:0003126;1.49e-38;7!UBERON:0001005;1.49e-38;7!UBERON:0007196;1.04e-18;15!UBERON:0001558;1.04e-18;15!UBERON:0005181;2.42e-07;35!UBERON:0005178;4.32e-07;34!UBERON:0000072;4.32e-07;37!UBERON:0002224;4.32e-07;34 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003127,4.61e-131,2;UBERON:0003126,1.49e-38,7;UBERON:0001005,1.49e-38,7;UBERON:0007196,1.04e-18,15;UBERON:0001558,1.04e-18,15;UBERON:0005178,6.54e-09,34;UBERON:0002224,6.54e-09,34;UBERON:0005181,1.09e-08,35;UBERON:0008947,4.36e-08,38;UBERON:0003258,4.36e-08,38;UBERON:0000072,9.72e-07,47 | |||
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|short_description=p@chr5:180017205..180017215,- | |short_description=p@chr5:180017205..180017215,- | ||
}} | }} |
Latest revision as of 13:59, 30 July 2015
Short description: | p@chr5:180017205..180017215, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr5:180017205..180017215, - |
Coexpression cluster: | C365_trachea_throat_aorta_lung_parotid_salivary_umbilical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
open tracheal system trachea | 4.61e-131 | 2 |
trachea | 1.49e-38 | 7 |
respiratory airway | 1.49e-38 | 7 |
tracheobronchial tree | 1.04e-18 | 15 |
lower respiratory tract | 1.04e-18 | 15 |
thoracic cavity element | 6.54e-09 | 34 |
thoracic cavity | 6.54e-09 | 34 |
thoracic segment organ | 1.09e-08 | 35 |
respiratory primordium | 4.36e-08 | 38 |
endoderm of foregut | 4.36e-08 | 38 |
segment of respiratory tract | 9.72e-07 | 47 |