FFCP PHASE1:Hg19::chr5:180257481..180257485,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-471bp_to_ENST00000501855_5end | |association_with_transcript=-471bp_to_ENST00000501855_5end | ||
|cluster_id=chr5:180257481..180257485,+ | |||
|coexpression_cluster_id=C409 | |||
|description=CAGE_peak_3_at_ENST00000501855_5end | |description=CAGE_peak_3_at_ENST00000501855_5end | ||
|id=chr5:180257481..180257485,+ | |id=chr5:180257481..180257485,+ | ||
|ontology_enrichment_celltype=CL:0002057!6.08e-19!42;CL:0000860!2.81e-17!45;CL:0002194!1.26e-15!63;CL:0000576!1.26e-15!63;CL:0000040!1.26e-15!63;CL:0000559!1.26e-15!63;CL:0002009!6.11e-15!65;CL:0000839!2.10e-13!70;CL:0000557!4.01e-13!71;CL:0000766!4.97e-13!76;CL:0000763!8.51e-07!112;CL:0000049!8.51e-07!112 | |ontology_enrichment_celltype=CL:0002057!6.08e-19!42;CL:0000860!2.81e-17!45;CL:0002194!1.26e-15!63;CL:0000576!1.26e-15!63;CL:0000040!1.26e-15!63;CL:0000559!1.26e-15!63;CL:0002009!6.11e-15!65;CL:0000839!2.10e-13!70;CL:0000557!4.01e-13!71;CL:0000766!4.97e-13!76;CL:0000763!8.51e-07!112;CL:0000049!8.51e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0002617;6.35e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002617,8.04e-08,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019_2=UBERON:0002038,3.15e-14,1;UBERON:0009661,3.15e-14,1;UBERON:0002950,3.15e-14,1;UBERON:0001891,3.15e-14,1;UBERON:0009616,3.15e-14,1;UBERON:0010286,3.15e-14,1;UBERON:0000200,8.11e-10,6;UBERON:0009663,2.32e-08,7;UBERON:0002771,5.37e-08,2;UBERON:0002702,6.15e-08,2;UBERON:0001875,7.52e-08,2;UBERON:0006514,7.52e-08,2 | |||
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| ||
|short_description=p3@ENST00000501855 | |short_description=p3@ENST00000501855 | ||
}} | }} |
Latest revision as of 14:02, 30 July 2015
Short description: | p3@ENST00000501855 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ENST00000501855_5end |
Coexpression cluster: | C409_adipose_mature_breast_lung_skeletal_Melanocyte_left |
Association with transcript: | -471bp_to_ENST00000501855_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
adipocyte of breast | 8.04e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
substantia nigra | 3.15e-14 | 1 |
midbrain nucleus | 3.15e-14 | 1 |
regional part of midbrain | 3.15e-14 | 1 |
midbrain | 3.15e-14 | 1 |
presumptive midbrain | 3.15e-14 | 1 |
midbrain neural tube | 3.15e-14 | 1 |
gyrus | 8.11e-10 | 6 |
telencephalic nucleus | 2.32e-08 | 7 |
middle temporal gyrus | 5.37e-08 | 2 |
middle frontal gyrus | 6.15e-08 | 2 |
globus pallidus | 7.52e-08 | 2 |
pallidum | 7.52e-08 | 2 |