FFCP PHASE1:Hg19::chr6:151562148..151562162,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:151562148..151562162,+ | |||
|description=CAGE_peak_at_chr6:151562148..151562162,+ | |description=CAGE_peak_at_chr6:151562148..151562162,+ | ||
|id=chr6:151562148..151562162,+ | |id=chr6:151562148..151562162,+ | ||
|ontology_enrichment_celltype=CL:0002319!3.48e-08!25;CL:0000128!5.25e-08!7;CL:0000126!5.25e-08!7;CL:0000127!5.25e-08!7;CL:0002453!5.25e-08!7;CL:0000540!8.12e-07!6;CL:0000031!8.12e-07!6;CL:0000404!8.12e-07!6;CL:0000047!8.87e-07!8 | |ontology_enrichment_celltype=CL:0002319!3.48e-08!25;CL:0000128!5.25e-08!7;CL:0000126!5.25e-08!7;CL:0000127!5.25e-08!7;CL:0002453!5.25e-08!7;CL:0000540!8.12e-07!6;CL:0000031!8.12e-07!6;CL:0000404!8.12e-07!6;CL:0000047!8.87e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000708;7.39e-21;3!CL:0000064;6.27e-20;3!CL:0000067;6.27e-20;3!CL:0005012;6.27e-20;3!CL:0002304;6.27e-20;3!CL:0000342;2.99e-08;1!CL:0002565;2.99e-08;1!CL:0000306;7.58e-08;4!CL:0002222;7.58e-08;4!CL:0002224;7.58e-08;4!CL:0000327;2.44e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000708,8.47e-21,3;CL:0000064,3.62e-20,3;CL:0000067,3.62e-20,3;CL:0005012,3.62e-20,3;CL:0002304,3.62e-20,3;CL:0000342,2.89e-08,1;CL:0002565,2.89e-08,1;CL:0000306,7.72e-08,4;CL:0002222,7.72e-08,4;CL:0002224,7.72e-08,4;CL:0000327,2.39e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3371;4.81e-08;1!DOID:4549;4.81e-08;1!DOID:5861;4.81e-08;1!DOID:6496;4.81e-08;1!DOID:3347;4.81e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3371,3.80e-08,1;DOID:4549,3.80e-08,1;DOID:5861,3.80e-08,1;DOID:6496,3.80e-08,1;DOID:3347,4.07e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!5.05e-23!82;UBERON:0005743!1.72e-22!86;UBERON:0000073!7.82e-22!94;UBERON:0001016!7.82e-22!94;UBERON:0001049!1.02e-19!57;UBERON:0005068!1.02e-19!57;UBERON:0006241!1.02e-19!57;UBERON:0007135!1.02e-19!57;UBERON:0003075!8.16e-19!86;UBERON:0007284!8.16e-19!86;UBERON:0002616!1.14e-18!59;UBERON:0000955!2.19e-17!69;UBERON:0006238!2.19e-17!69;UBERON:0002346!2.77e-17!90;UBERON:0004121!4.20e-14!169;UBERON:0000119!1.31e-13!312;UBERON:0000924!2.55e-13!173;UBERON:0006601!2.55e-13!173;UBERON:0003056!3.77e-13!61;UBERON:0000483!4.14e-12!309;UBERON:0002780!1.12e-11!41;UBERON:0001890!1.12e-11!41;UBERON:0006240!1.12e-11!41;UBERON:0000033!1.87e-11!123;UBERON:0000153!2.18e-11!129;UBERON:0007811!2.18e-11!129;UBERON:0003080!3.23e-11!42;UBERON:0002020!4.24e-11!34;UBERON:0003528!4.24e-11!34;UBERON:0000025!5.47e-11!194;UBERON:0001869!7.22e-11!32;UBERON:0001893!7.63e-11!34;UBERON:0003076!8.05e-11!15;UBERON:0003057!8.05e-11!15;UBERON:0002791!2.37e-10!33;UBERON:0004733!3.76e-10!12;UBERON:0002028!3.76e-10!12;UBERON:0007277!3.76e-10!12;UBERON:0002680!5.05e-10!9;UBERON:0001895!5.05e-10!9;UBERON:0010092!5.05e-10!9;UBERON:0000477!5.32e-10!286;UBERON:0000475!9.33e-10!365;UBERON:0004111!1.43e-09!241;UBERON:0004732!3.96e-09!13;UBERON:0000956!5.56e-09!25;UBERON:0000203!5.56e-09!25;UBERON:0000481!5.11e-08!347;UBERON:0000064!1.38e-07!219;UBERON:0002037!1.98e-07!6;UBERON:0006215!1.98e-07!6;UBERON:0007023!3.01e-07!115;UBERON:0000467!6.87e-07!625;UBERON:0000480!8.11e-07!626;UBERON:0000922!8.96e-07!612 | |ontology_enrichment_uberon=UBERON:0001017!5.05e-23!82;UBERON:0005743!1.72e-22!86;UBERON:0000073!7.82e-22!94;UBERON:0001016!7.82e-22!94;UBERON:0001049!1.02e-19!57;UBERON:0005068!1.02e-19!57;UBERON:0006241!1.02e-19!57;UBERON:0007135!1.02e-19!57;UBERON:0003075!8.16e-19!86;UBERON:0007284!8.16e-19!86;UBERON:0002616!1.14e-18!59;UBERON:0000955!2.19e-17!69;UBERON:0006238!2.19e-17!69;UBERON:0002346!2.77e-17!90;UBERON:0004121!4.20e-14!169;UBERON:0000119!1.31e-13!312;UBERON:0000924!2.55e-13!173;UBERON:0006601!2.55e-13!173;UBERON:0003056!3.77e-13!61;UBERON:0000483!4.14e-12!309;UBERON:0002780!1.12e-11!41;UBERON:0001890!1.12e-11!41;UBERON:0006240!1.12e-11!41;UBERON:0000033!1.87e-11!123;UBERON:0000153!2.18e-11!129;UBERON:0007811!2.18e-11!129;UBERON:0003080!3.23e-11!42;UBERON:0002020!4.24e-11!34;UBERON:0003528!4.24e-11!34;UBERON:0000025!5.47e-11!194;UBERON:0001869!7.22e-11!32;UBERON:0001893!7.63e-11!34;UBERON:0003076!8.05e-11!15;UBERON:0003057!8.05e-11!15;UBERON:0002791!2.37e-10!33;UBERON:0004733!3.76e-10!12;UBERON:0002028!3.76e-10!12;UBERON:0007277!3.76e-10!12;UBERON:0002680!5.05e-10!9;UBERON:0001895!5.05e-10!9;UBERON:0010092!5.05e-10!9;UBERON:0000477!5.32e-10!286;UBERON:0000475!9.33e-10!365;UBERON:0004111!1.43e-09!241;UBERON:0004732!3.96e-09!13;UBERON:0000956!5.56e-09!25;UBERON:0000203!5.56e-09!25;UBERON:0000481!5.11e-08!347;UBERON:0000064!1.38e-07!219;UBERON:0002037!1.98e-07!6;UBERON:0006215!1.98e-07!6;UBERON:0007023!3.01e-07!115;UBERON:0000467!6.87e-07!625;UBERON:0000480!8.11e-07!626;UBERON:0000922!8.96e-07!612 | ||
|ontology_enrichment_uberon_v019=UBERON:0000488;2.02e-26;4!UBERON:0007625;2.53e-21;11!UBERON:0003210;7.39e-21;3!UBERON:0000970;4.99e-20;20!UBERON:0001778;6.27e-20;3!UBERON:0001775;6.27e-20;3!UBERON:0002104;5.08e-19;21!UBERON:0002203;1.07e-17;6!UBERON:0001768;1.07e-17;6!UBERON:0002200;1.07e-17;6!UBERON:0000020;2.88e-17;23!UBERON:0001801;1.20e-16;14!UBERON:0001032;1.69e-16;24!UBERON:0004456;1.69e-16;24!UBERON:0000019;3.18e-16;19!UBERON:0000047;3.18e-16;19!UBERON:0004088;3.18e-16;19!UBERON:0010230;3.18e-16;19!UBERON:0001456;1.34e-14;21!UBERON:0006876;1.01e-09;11!UBERON:0002506;2.99e-08;1!UBERON:0001769;2.99e-08;1!UBERON:0010077;7.58e-08;4!UBERON:0005389;7.58e-08;4!UBERON:0000484;7.58e-08;4!UBERON:0000965;7.58e-08;4!UBERON:0001803;7.58e-08;4!UBERON:0010371;4.76e-07;31 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,1.12e-26,4;UBERON:0007625,1.88e-21,11;UBERON:0003210,8.47e-21,3;UBERON:0001778,3.62e-20,3;UBERON:0001775,3.62e-20,3;UBERON:0000970,4.52e-19,21;UBERON:0002104,4.52e-19,21;UBERON:0002203,7.27e-18,6;UBERON:0001768,7.27e-18,6;UBERON:0002200,7.27e-18,6;UBERON:0001801,9.53e-17,14;UBERON:0000020,1.52e-16,24;UBERON:0001032,1.52e-16,24;UBERON:0004456,1.52e-16,24;UBERON:0000019,1.97e-15,20;UBERON:0000047,1.97e-15,20;UBERON:0010312,1.97e-15,20;UBERON:0004088,1.97e-15,20;UBERON:0010230,1.97e-15,20;UBERON:0003072,1.97e-15,20;UBERON:0004128,1.97e-15,20;UBERON:0003071,1.97e-15,20;UBERON:0001456,5.95e-14,22;UBERON:0006876,8.19e-10,11;UBERON:0005085,1.19e-09,31;UBERON:0003075,4.83e-09,82;UBERON:0007284,4.83e-09,82;UBERON:0002346,1.59e-08,86;UBERON:0002506,2.89e-08,1;UBERON:0001769,2.89e-08,1;UBERON:0010077,7.72e-08,4;UBERON:0005389,7.72e-08,4;UBERON:0000484,7.72e-08,4;UBERON:0002546,7.72e-08,4;UBERON:0000965,7.72e-08,4;UBERON:0001803,7.72e-08,4;UBERON:0003073,7.72e-08,4;UBERON:0005426,7.72e-08,4;UBERON:0003056,3.83e-07,61 | |||
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| ||
|short_description=p@chr6:151562148..151562162,+ | |short_description=p@chr6:151562148..151562162,+ | ||
}} | }} |
Latest revision as of 20:57, 30 July 2015
Short description: | p@chr6:151562148..151562162, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:151562148..151562162, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 8.47e-21 | 3 |
ciliated cell | 3.62e-20 | 3 |
ciliated epithelial cell | 3.62e-20 | 3 |
multi-ciliated epithelial cell | 3.62e-20 | 3 |
non-pigmented ciliary epithelial cell | 3.62e-20 | 3 |
pigment cell (sensu Vertebrata) | 2.89e-08 | 1 |
iris pigment epithelial cell | 2.89e-08 | 1 |
crystallin accumulating cell | 7.72e-08 | 4 |
vertebrate lens cell | 7.72e-08 | 4 |
lens epithelial cell | 7.72e-08 | 4 |
extracellular matrix secreting cell | 2.39e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
chondrosarcoma | 3.80e-08 | 1 |
extraosseous chondrosarcoma | 3.80e-08 | 1 |
myxoid chondrosarcoma | 3.80e-08 | 1 |
extraskeletal myxoid chondrosarcoma | 3.80e-08 | 1 |
osteosarcoma | 4.07e-08 | 1 |