FFCP PHASE1:Hg19::chr6:155427848..155427862,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:155427848..155427862,+ | |||
|coexpression_cluster_id=C77 | |||
|description=CAGE_peak_at_chr6:155427848..155427862,+ | |description=CAGE_peak_at_chr6:155427848..155427862,+ | ||
|id=chr6:155427848..155427862,+ | |id=chr6:155427848..155427862,+ | ||
|ontology_enrichment_celltype=CL:0000035!1.09e-20!20;CL:0000062!4.79e-20!11;CL:0000375!4.79e-20!11;CL:0000335!4.79e-20!11;CL:0000594!2.83e-12!3;CL:0000055!5.40e-11!180;CL:0000319!6.91e-10!1 | |ontology_enrichment_celltype=CL:0000035!1.09e-20!20;CL:0000062!4.79e-20!11;CL:0000375!4.79e-20!11;CL:0000335!4.79e-20!11;CL:0000594!2.83e-12!3;CL:0000055!5.40e-11!180;CL:0000319!6.91e-10!1 | ||
|ontology_enrichment_celltype_v019=CL:0000054;7.05e-34;2!CL:0000137;7.05e-34;2!CL:0000092;7.05e-34;2!CL:0000062;2.66e-30;9!CL:0002092;6.56e-08;10 | |||
|ontology_enrichment_celltype_v019_2=CL:0000062,2.16e-54,11;CL:0000375,2.16e-54,11;CL:0000335,2.16e-54,11;CL:0000054,7.05e-34,2;CL:0000137,7.05e-34,2;CL:0000092,7.05e-34,2;CL:0002092,6.56e-08,10 | |||
|ontology_enrichment_development_v019=CL:0000335;2.16e-54;11 | |||
|ontology_enrichment_disease=DOID:3369!3.10e-10!1;DOID:3030!6.91e-10!1;DOID:17!8.61e-08!5;DOID:450!8.61e-08!5;DOID:66!8.61e-08!5;DOID:423!8.61e-08!5;DOID:0080000!8.61e-08!5;DOID:11722!8.61e-08!5 | |ontology_enrichment_disease=DOID:3369!3.10e-10!1;DOID:3030!6.91e-10!1;DOID:17!8.61e-08!5;DOID:450!8.61e-08!5;DOID:66!8.61e-08!5;DOID:423!8.61e-08!5;DOID:0080000!8.61e-08!5;DOID:11722!8.61e-08!5 | ||
|ontology_enrichment_disease_v019=DOID:200;7.05e-34;2!DOID:4305;7.05e-34;2!DOID:201;2.74e-12;6!DOID:0060100;2.74e-12;6 | |||
|ontology_enrichment_disease_v019_2=DOID:200,7.05e-34,2;DOID:4305,7.05e-34,2;DOID:201,2.74e-12,6;DOID:0060100,2.74e-12,6 | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019=UBERON:0001474;8.86e-34;18!UBERON:0004765;8.76e-24;26!UBERON:0001434;1.32e-18;36!UBERON:0002204;7.39e-07;70!UBERON:0002371;8.38e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,3.31e-08,82;UBERON:0004765,1.43e-07,90;UBERON:0001434,6.45e-07,100 | |||
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|short_description=p@chr6:155427848..155427862,+ | |short_description=p@chr6:155427848..155427862,+ | ||
}} | }} |
Latest revision as of 21:14, 30 July 2015
Short description: | p@chr6:155427848..155427862, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:155427848..155427862, + |
Coexpression cluster: | C77_Saos2_osteosarcoma_Neutrophils_Natural_Chondrocyte_Basophils_CD8 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
osteoblast | 2.16e-54 | 11 |
osteoprogenitor cell | 2.16e-54 | 11 |
mesenchyme condensation cell | 2.16e-54 | 11 |
bone matrix secreting cell | 7.05e-34 | 2 |
osteocyte | 7.05e-34 | 2 |
osteoclast | 7.05e-34 | 2 |
bone marrow cell | 6.56e-08 | 10 |
Ontology term | p-value | n |
---|---|---|
bone element | 3.31e-08 | 82 |
skeletal element | 1.43e-07 | 90 |
skeletal system | 6.45e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
giant cell tumor | 7.05e-34 | 2 |
bone giant cell tumor | 7.05e-34 | 2 |
connective tissue cancer | 2.74e-12 | 6 |
musculoskeletal system cancer | 2.74e-12 | 6 |