FFCP PHASE1:Hg19::chr6:21665095..21665110,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:21665095..21665110,- | |||
|coexpression_cluster_id=C724 | |coexpression_cluster_id=C724 | ||
|description=CAGE_peak_at_chr6:21665095..21665110,- | |description=CAGE_peak_at_chr6:21665095..21665110,- | ||
|id=chr6:21665095..21665110,- | |id=chr6:21665095..21665110,- | ||
|ontology_enrichment_celltype=CL:1001319;7.47e-30;1!CL:1000600;7.47e-30;1!CL:0000540;8.62e-20;6!CL:0000404;8.62e-20;6!CL:0000082;6.38e-07;19 | |ontology_enrichment_celltype=CL:0002322!1.40e-21!5;CL:0000039!3.07e-15!7;CL:0000586!3.07e-15!7;CL:0002605!6.82e-13!3;CL:0000540!3.82e-12!6;CL:0000031!3.82e-12!6;CL:0000404!3.82e-12!6;CL:0002319!2.59e-11!25;CL:0002545!6.93e-10!2;CL:0000128!1.18e-09!7;CL:0000126!1.18e-09!7;CL:0000127!1.18e-09!7;CL:0002453!1.18e-09!7;CL:0000047!4.08e-09!8;CL:0000133!5.86e-09!59;CL:0000071!4.17e-08!18;CL:0002546!4.17e-08!18;CL:0002139!6.57e-08!24;CL:1000413!7.25e-08!9;CL:0002544!3.93e-07!6;CL:0000221!4.74e-07!71;CL:0002321!7.63e-07!248 | ||
| | |ontology_enrichment_celltype_v019=CL:1001319;7.47e-30;1!CL:1000600;7.47e-30;1!CL:0000540;8.62e-20;6!CL:0000404;8.62e-20;6!CL:0000082;6.38e-07;19 | ||
|ontology_enrichment_disease=DOID:5409;4.21e-29;4!DOID:1325;4.02e-17;7!DOID:3904;4.02e-17;7!DOID:3905;1.49e-13;9!DOID:1324;1.59e-08;15!DOID:0050615;4.74e-08;16 | |ontology_enrichment_celltype_v019_2=CL:1001319,7.48e-30,1;CL:1000600,7.48e-30,1;CL:0000540,7.13e-20,6;CL:0000031,7.13e-20,6;CL:0000404,7.13e-20,6;CL:0000047,3.53e-15,8;CL:0000082,7.18e-07,19 | ||
|ontology_enrichment_uberon=UBERON:0004645;7.47e-30;1!UBERON:0001256;7.47e-30;1!UBERON:0001259;7.47e-30;1!UBERON:0001255;1.15e-15;2!UBERON:0001556;1.15e-15;2!UBERON:0005911;4.65e-08;36!UBERON:0000365;4.79e-07;5!UBERON:0004802;6.38e-07;19!UBERON:0000115;6.38e-07;19 | |ontology_enrichment_development_v019=CL:0000031;8.62e-20;6 | ||
|ontology_enrichment_disease=DOID:5409!1.26e-10!4;DOID:3095!1.57e-08!22;DOID:2994!1.57e-08!22 | |||
|ontology_enrichment_disease_v019=DOID:5409;4.21e-29;4!DOID:1325;4.02e-17;7!DOID:3904;4.02e-17;7!DOID:3905;1.49e-13;9!DOID:1324;1.59e-08;15!DOID:0050615;4.74e-08;16 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,7.46e-29,4;DOID:1325,5.57e-17,7;DOID:3904,5.57e-17,7;DOID:3905,1.91e-13,9;DOID:1324,1.85e-08,15;DOID:0050615,5.46e-08,16 | |||
|ontology_enrichment_uberon=UBERON:0005800!6.93e-10!2;UBERON:0001515!6.93e-10!2;UBERON:0000473!5.69e-09!8;UBERON:0001986!4.17e-08!18;UBERON:0004638!4.17e-08!18;UBERON:0004852!4.17e-08!18;UBERON:0003915!7.25e-08!9;UBERON:0004700!7.25e-08!9;UBERON:0001917!7.25e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;7.47e-30;1!UBERON:0001256;7.47e-30;1!UBERON:0001259;7.47e-30;1!UBERON:0001255;1.15e-15;2!UBERON:0001556;1.15e-15;2!UBERON:0005911;4.65e-08;36!UBERON:0000365;4.79e-07;5!UBERON:0004802;6.38e-07;19!UBERON:0000115;6.38e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,7.48e-30,1;UBERON:0001256,7.48e-30,1;UBERON:0001259,7.48e-30,1;UBERON:0001255,1.15e-15,2;UBERON:0001556,1.15e-15,2;UBERON:0000365,4.79e-07,5;UBERON:0004802,7.18e-07,19;UBERON:0000115,7.18e-07,19 | |||
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| ||
|short_description=p@chr6:21665095..21665110,- | |short_description=p@chr6:21665095..21665110,- | ||
}} | }} |
Latest revision as of 22:38, 30 July 2015
Short description: | p@chr6:21665095..21665110, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:21665095..21665110, - |
Coexpression cluster: | C724_transitionalcell_parietal_occipital_duodenum_temporal_non_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bladder cell | 7.48e-30 | 1 |
lower urinary tract cell | 7.48e-30 | 1 |
neuron | 7.13e-20 | 6 |
neuroblast | 7.13e-20 | 6 |
electrically signaling cell | 7.13e-20 | 6 |
neuronal stem cell | 3.53e-15 | 8 |
epithelial cell of lung | 7.18e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 7.48e-30 | 1 |
wall of urinary bladder | 7.48e-30 | 1 |
mucosa of urinary bladder | 7.48e-30 | 1 |
urinary bladder | 1.15e-15 | 2 |
lower urinary tract | 1.15e-15 | 2 |
urothelium | 4.79e-07 | 5 |
respiratory tract epithelium | 7.18e-07 | 19 |
lung epithelium | 7.18e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 7.46e-29 | 4 |
bronchus cancer | 5.57e-17 | 7 |
bronchogenic carcinoma | 5.57e-17 | 7 |
lung carcinoma | 1.91e-13 | 9 |
lung cancer | 1.85e-08 | 15 |
respiratory system cancer | 5.46e-08 | 16 |