FFCP PHASE1:Hg19::chr6:45618609..45618622,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:45618609..45618622,+ | |||
|description=CAGE_peak_at_chr6:45618609..45618622,+ | |description=CAGE_peak_at_chr6:45618609..45618622,+ | ||
|id=chr6:45618609..45618622,+ | |id=chr6:45618609..45618622,+ | ||
|ontology_enrichment_celltype=CL:0000708;1.09e-18;3!CL:0000064;2.34e-18;3!CL:0000067;2.34e-18;3!CL:0005012;2.34e-18;3!CL:0002304;2.34e-18;3!CL:0002559;1.96e-11;5!CL:0000346;4.58e-09;3!CL:1000428;4.58e-09;3!CL:0002603;7.59e-09;3!CL:0000342;1.38e-07;1!CL:0002565;1.38e-07;1!CL:0000319;3.00e-07;1 | |ontology_enrichment_celltype=CL:0000144!2.62e-09!625;CL:1000497!3.73e-09!18;CL:0002518!3.73e-09!18;CL:0000548!8.24e-09!679;CL:0000004!8.24e-09!679;CL:0000255!8.24e-09!679;CL:0000012!1.23e-08!682;CL:0002371!1.22e-07!591;CL:1000449!3.56e-07!16;CL:0000220!4.61e-07!246;CL:0002321!6.68e-07!248 | ||
| | |ontology_enrichment_celltype_v019=CL:0000708;1.09e-18;3!CL:0000064;2.34e-18;3!CL:0000067;2.34e-18;3!CL:0005012;2.34e-18;3!CL:0002304;2.34e-18;3!CL:0002559;1.96e-11;5!CL:0000346;4.58e-09;3!CL:1000428;4.58e-09;3!CL:0002603;7.59e-09;3!CL:0000342;1.38e-07;1!CL:0002565;1.38e-07;1!CL:0000319;3.00e-07;1 | ||
|ontology_enrichment_disease=DOID:3030;3.00e-07;1 | |ontology_enrichment_celltype_v019_2=CL:0000708,4.25e-19,3;CL:0000064,1.63e-18,3;CL:0000067,1.63e-18,3;CL:0005012,1.63e-18,3;CL:0002304,1.63e-18,3;CL:0002559,1.61e-11,5;CL:0000346,3.82e-09,3;CL:1000428,3.82e-09,3;CL:0002603,7.60e-09,3;CL:0000342,1.51e-07,1;CL:0002565,1.51e-07,1;CL:0000319,3.62e-07,1 | ||
|ontology_enrichment_uberon=UBERON:0000488;3.31e-24;4!UBERON:0003210;1.09e-18;3!UBERON:0001778;2.34e-18;3!UBERON:0001775;2.34e-18;3!UBERON:0002203;3.22e-16;6!UBERON:0001768;3.22e-16;6!UBERON:0002200;3.22e-16;6!UBERON:0007625;1.03e-13;11!UBERON:0002073;1.96e-11;5!UBERON:0001801;9.88e-11;14!UBERON:0010371;2.02e-10;31!UBERON:0000412;4.58e-09;3!UBERON:0001992;4.58e-09;3!UBERON:0006876;6.45e-09;11!UBERON:0000019;7.59e-08;19!UBERON:0000047;7.59e-08;19!UBERON:0004088;7.59e-08;19!UBERON:0010230;7.59e-08;19!UBERON:0002506;1.38e-07;1!UBERON:0001769;1.38e-07;1!UBERON:0000970;1.93e-07;20!UBERON:0002104;4.48e-07;21!UBERON:0001456;4.48e-07;21 | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3030;3.00e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3030,3.62e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005256!4.31e-11!143;UBERON:0007625!3.55e-09!11;UBERON:0002067!6.10e-09!9;UBERON:0004016!6.10e-09!9;UBERON:0010083!6.10e-09!9;UBERON:0000914!2.33e-08!83;UBERON:0002329!2.33e-08!83;UBERON:0003077!2.33e-08!83;UBERON:0003059!2.33e-08!83;UBERON:0007282!2.33e-08!83;UBERON:0009618!2.33e-08!83;UBERON:0007285!2.33e-08!83;UBERON:0000488!3.24e-08!4;UBERON:0004290!8.12e-08!70;UBERON:0004211!3.56e-07!16;UBERON:0001285!3.56e-07!16;UBERON:0007684!3.56e-07!16;UBERON:0003220!3.56e-07!16;UBERON:0004208!3.56e-07!16;UBERON:0002200!4.46e-07!11;UBERON:0006876!4.46e-07!11 | |||
|ontology_enrichment_uberon_v019=UBERON:0000488;3.31e-24;4!UBERON:0003210;1.09e-18;3!UBERON:0001778;2.34e-18;3!UBERON:0001775;2.34e-18;3!UBERON:0002203;3.22e-16;6!UBERON:0001768;3.22e-16;6!UBERON:0002200;3.22e-16;6!UBERON:0007625;1.03e-13;11!UBERON:0002073;1.96e-11;5!UBERON:0001801;9.88e-11;14!UBERON:0010371;2.02e-10;31!UBERON:0000412;4.58e-09;3!UBERON:0001992;4.58e-09;3!UBERON:0006876;6.45e-09;11!UBERON:0000019;7.59e-08;19!UBERON:0000047;7.59e-08;19!UBERON:0004088;7.59e-08;19!UBERON:0010230;7.59e-08;19!UBERON:0002506;1.38e-07;1!UBERON:0001769;1.38e-07;1!UBERON:0000970;1.93e-07;20!UBERON:0002104;4.48e-07;21!UBERON:0001456;4.48e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000488,2.53e-24,4;UBERON:0003210,4.25e-19,3;UBERON:0001778,1.63e-18,3;UBERON:0001775,1.63e-18,3;UBERON:0002203,2.70e-16,6;UBERON:0001768,2.70e-16,6;UBERON:0002200,2.70e-16,6;UBERON:0007625,9.13e-14,11;UBERON:0002073,1.61e-11,5;UBERON:0005086,1.61e-11,5;UBERON:0005085,2.00e-11,31;UBERON:0001801,9.01e-11,14;UBERON:0000412,3.82e-09,3;UBERON:0001992,3.82e-09,3;UBERON:0006876,5.87e-09,11;UBERON:0002506,1.51e-07,1;UBERON:0001769,1.51e-07,1;UBERON:0000019,1.81e-07,20;UBERON:0000047,1.81e-07,20;UBERON:0010312,1.81e-07,20;UBERON:0004088,1.81e-07,20;UBERON:0010230,1.81e-07,20;UBERON:0003072,1.81e-07,20;UBERON:0004128,1.81e-07,20;UBERON:0003071,1.81e-07,20;UBERON:0000970,4.22e-07,21;UBERON:0002104,4.22e-07,21;UBERON:0001456,9.12e-07,22 | |||
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| ||
|short_description=p@chr6:45618609..45618622,+ | |short_description=p@chr6:45618609..45618622,+ | ||
}} | }} |
Latest revision as of 02:03, 31 July 2015
Short description: | p@chr6:45618609..45618622, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:45618609..45618622, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leptomeningeal cell | 4.25e-19 | 3 |
ciliated cell | 1.63e-18 | 3 |
ciliated epithelial cell | 1.63e-18 | 3 |
multi-ciliated epithelial cell | 1.63e-18 | 3 |
non-pigmented ciliary epithelial cell | 1.63e-18 | 3 |
hair follicle cell | 1.61e-11 | 5 |
hair follicle dermal papilla cell | 3.82e-09 | 3 |
stem cell of epidermis | 3.82e-09 | 3 |
astrocyte of the cerebellum | 7.60e-09 | 3 |
pigment cell (sensu Vertebrata) | 1.51e-07 | 1 |
iris pigment epithelial cell | 1.51e-07 | 1 |
mucus secreting cell | 3.62e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
atypical epithelium | 2.53e-24 | 4 |
blood-cerebrospinal fluid barrier | 4.25e-19 | 3 |
ciliary epithelium | 1.63e-18 | 3 |
ciliary body | 1.63e-18 | 3 |
vasculature of eye | 2.70e-16 | 6 |
uvea | 2.70e-16 | 6 |
vasculature of head | 2.70e-16 | 6 |
pigment epithelium of eye | 9.13e-14 | 11 |
hair follicle | 1.61e-11 | 5 |
hair follicle placode | 1.61e-11 | 5 |
ectodermal placode | 2.00e-11 | 31 |
anterior segment of eyeball | 9.01e-11 | 14 |
dermal papilla | 3.82e-09 | 3 |
papillary layer of dermis | 3.82e-09 | 3 |
vasculature of organ | 5.87e-09 | 11 |
iris epithelium | 1.51e-07 | 1 |
iris | 1.51e-07 | 1 |
camera-type eye | 1.81e-07 | 20 |
simple eye | 1.81e-07 | 20 |
immature eye | 1.81e-07 | 20 |
ocular region | 1.81e-07 | 20 |
eyeball of camera-type eye | 1.81e-07 | 20 |
optic cup | 1.81e-07 | 20 |
optic vesicle | 1.81e-07 | 20 |
eye primordium | 1.81e-07 | 20 |
eye | 4.22e-07 | 21 |
visual system | 4.22e-07 | 21 |
face | 9.12e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
mucinous adenocarcinoma | 3.62e-07 | 1 |