FFCP PHASE1:Hg19::chr6:74847986..74848013,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:74847986..74848013,+ | |||
|coexpression_cluster_id=C4625 | |coexpression_cluster_id=C4625 | ||
|description=CAGE_peak_at_chr6:74847986..74848013,+ | |description=CAGE_peak_at_chr6:74847986..74848013,+ | ||
|id=chr6:74847986..74848013,+ | |id=chr6:74847986..74848013,+ | ||
|ontology_enrichment_celltype=CL:0005020!1.66e-09!6;CL:0002138!1.66e-09!6;CL:0005022!1.66e-09!6 | |ontology_enrichment_celltype=CL:0005020!1.66e-09!6;CL:0002138!1.66e-09!6;CL:0005022!1.66e-09!6 | ||
|ontology_enrichment_celltype_v019=CL:0002138;2.56e-21;6!CL:0002139;1.72e-12;24!CL:0002144;6.21e-11;3!CL:0002579;1.02e-10;3!CL:0002541;6.02e-10;3!CL:0002580;6.02e-10;3!CL:0002334;4.03e-09;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,2.63e-21,6;CL:0002138,2.63e-21,6;CL:0005022,2.63e-21,6;CL:0002139,1.57e-12,24;CL:0002144,7.23e-11,3;CL:0002579,1.14e-10,3;CL:0002580,5.16e-10,3;CL:0002541,5.33e-10,3;CL:0002334,3.95e-09,12;CL:0000115,1.21e-07,36;CL:0002078,5.70e-07,45 | |||
|ontology_enrichment_development_v019=CL:0005022;2.56e-21;6 | |||
|ontology_enrichment_disease=DOID:193!3.42e-10!29;DOID:120!8.29e-09!27;DOID:2394!2.30e-08!14 | |ontology_enrichment_disease=DOID:193!3.42e-10!29;DOID:120!8.29e-09!27;DOID:2394!2.30e-08!14 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002323!1.48e-11!46;UBERON:0004458!2.37e-10!49;UBERON:0005156!3.40e-08!59;UBERON:0000990!3.40e-08!59;UBERON:0000991!8.23e-08!21;UBERON:0009196!8.23e-08!21;UBERON:0009117!8.23e-08!21;UBERON:0005564!8.23e-08!21;UBERON:0003886!1.00e-07!63;UBERON:0004176!2.76e-07!22;UBERON:0002553!6.43e-07!70;UBERON:0001473!9.44e-07!8;UBERON:0004536!9.44e-07!8;UBERON:0006558!9.44e-07!8 | |ontology_enrichment_uberon=UBERON:0002323!1.48e-11!46;UBERON:0004458!2.37e-10!49;UBERON:0005156!3.40e-08!59;UBERON:0000990!3.40e-08!59;UBERON:0000991!8.23e-08!21;UBERON:0009196!8.23e-08!21;UBERON:0009117!8.23e-08!21;UBERON:0005564!8.23e-08!21;UBERON:0003886!1.00e-07!63;UBERON:0004176!2.76e-07!22;UBERON:0002553!6.43e-07!70;UBERON:0001473!9.44e-07!8;UBERON:0004536!9.44e-07!8;UBERON:0006558!9.44e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0001473;8.75e-16;8!UBERON:0004536;8.75e-16;8!UBERON:0006558;8.75e-16;8!UBERON:0002465;1.84e-12;10!UBERON:0010523;6.21e-11;3!UBERON:0001915;6.21e-11;3!UBERON:0001982;6.21e-11;3!UBERON:0003124;6.02e-10;3!UBERON:0000920;6.02e-10;3!UBERON:0003688;4.56e-09;6!UBERON:0002358;4.56e-09;6!UBERON:0003684;4.56e-09;6!UBERON:0001178;4.56e-09;6!UBERON:0001443;9.50e-07;11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,8.90e-16,8;UBERON:0004536,8.90e-16,8;UBERON:0006558,8.90e-16,8;UBERON:0002465,1.87e-12,10;UBERON:0010523,7.23e-11,3;UBERON:0001915,7.23e-11,3;UBERON:0001982,7.23e-11,3;UBERON:0000920,5.33e-10,3;UBERON:0003688,4.52e-09,6;UBERON:0002358,4.52e-09,6;UBERON:0003684,4.52e-09,6;UBERON:0001178,4.52e-09,6;UBERON:0002323,5.59e-09,46;UBERON:0004458,2.96e-08,49;UBERON:0003886,3.11e-07,54;UBERON:0002553,3.79e-07,61;UBERON:0001443,8.24e-07,11 | |||
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| ||
|short_description=p@chr6:74847986..74848013,+ | |short_description=p@chr6:74847986..74848013,+ | ||
}} | }} |
Latest revision as of 03:08, 31 July 2015
Short description: | p@chr6:74847986..74848013, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:74847986..74848013, + |
Coexpression cluster: | C4625_Endothelial_Lymphatic_cervical_Retinal_Preadipocyte_Mesenchymal_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 2.63e-21 | 6 |
endothelial cell of lymphatic vessel | 2.63e-21 | 6 |
vascular lymphangioblast | 2.63e-21 | 6 |
endothelial cell of vascular tree | 1.57e-12 | 24 |
capillary endothelial cell | 7.23e-11 | 3 |
omentum preadipocyte | 1.14e-10 | 3 |
preadipocyte of the breast | 5.16e-10 | 3 |
chorionic membrane mesenchymal stem cell | 5.33e-10 | 3 |
preadipocyte | 3.95e-09 | 12 |
endothelial cell | 1.21e-07 | 36 |
meso-epithelial cell | 5.70e-07 | 45 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 8.90e-16 | 8 |
lymph vasculature | 8.90e-16 | 8 |
lymphatic part of lymphoid system | 8.90e-16 | 8 |
lymphoid system | 1.87e-12 | 10 |
microcirculatory vessel | 7.23e-11 | 3 |
endothelium of capillary | 7.23e-11 | 3 |
capillary | 7.23e-11 | 3 |
egg chorion | 5.33e-10 | 3 |
omentum | 4.52e-09 | 6 |
peritoneum | 4.52e-09 | 6 |
abdominal cavity | 4.52e-09 | 6 |
visceral peritoneum | 4.52e-09 | 6 |
body cavity | 5.59e-09 | 46 |
body cavity or lining | 2.96e-08 | 49 |
body cavity precursor | 3.11e-07 | 54 |
anatomical cavity | 3.79e-07 | 61 |
chest | 8.24e-07 | 11 |