FFCP PHASE1:Hg19::chr6:74848034..74848043,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:74848034..74848043,+ | |||
|coexpression_cluster_id=C4625 | |||
|description=CAGE_peak_at_chr6:74848034..74848043,+ | |description=CAGE_peak_at_chr6:74848034..74848043,+ | ||
|id=chr6:74848034..74848043,+ | |id=chr6:74848034..74848043,+ | ||
|ontology_enrichment_celltype=CL:0005020!6.48e-19!6;CL:0002138!6.48e-19!6;CL:0005022!6.48e-19!6;CL:0002139!5.64e-11!24;CL:0002144!4.58e-10!3;CL:0002541!1.69e-09!3;CL:0002580!5.82e-09!3;CL:0002178!1.18e-08!3;CL:0000115!3.11e-08!35;CL:0000213!3.34e-08!57;CL:0000215!3.34e-08!57;CL:0002078!2.53e-07!44 | |ontology_enrichment_celltype=CL:0005020!6.48e-19!6;CL:0002138!6.48e-19!6;CL:0005022!6.48e-19!6;CL:0002139!5.64e-11!24;CL:0002144!4.58e-10!3;CL:0002541!1.69e-09!3;CL:0002580!5.82e-09!3;CL:0002178!1.18e-08!3;CL:0000115!3.11e-08!35;CL:0000213!3.34e-08!57;CL:0000215!3.34e-08!57;CL:0002078!2.53e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0002138;1.71e-85;6!CL:0002139;2.10e-37;24!CL:0002078;1.07e-21;45!CL:0002144;7.51e-20;3!CL:0000115;1.02e-18;36!CL:0002174;2.95e-15;1!CL:0000501;2.95e-15;1!CL:0000213;1.28e-10;58!CL:0000215;1.28e-10;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0005020,1.60e-85,6;CL:0002138,1.60e-85,6;CL:0005022,1.60e-85,6;CL:0002139,1.91e-37,24;CL:0002078,7.94e-25,45;CL:0000115,8.74e-25,36;CL:0002144,6.50e-20,3;CL:0000213,4.08e-19,58;CL:0000215,4.08e-19,58;CL:0002174,3.17e-15,1;CL:0000501,3.17e-15,1;CL:0000222,9.11e-11,121 | |||
|ontology_enrichment_development_v019=CL:0005022;1.71e-85;6!UBERON:0000358;1.66e-15;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001473!5.80e-14!8;UBERON:0004536!5.80e-14!8;UBERON:0006558!5.80e-14!8;UBERON:0002465!5.44e-11!10;UBERON:0001915!4.58e-10!3;UBERON:0001982!4.58e-10!3;UBERON:0000476!1.69e-09!3;UBERON:0000920!1.69e-09!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001473;3.84e-64;8!UBERON:0004536;3.84e-64;8!UBERON:0006558;3.84e-64;8!UBERON:0002465;2.54e-51;10!UBERON:0010523;7.51e-20;3!UBERON:0001915;7.51e-20;3!UBERON:0001982;7.51e-20;3!UBERON:0002405;6.08e-19;27!UBERON:0002193;1.09e-10;42!UBERON:0000055;3.83e-10;65!UBERON:0002049;2.35e-08;75!UBERON:0007798;2.35e-08;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001473,3.64e-64,8;UBERON:0004536,3.64e-64,8;UBERON:0006558,3.64e-64,8;UBERON:0002465,2.44e-51,10;UBERON:0010523,6.50e-20,3;UBERON:0001915,6.50e-20,3;UBERON:0001982,6.50e-20,3;UBERON:0000055,8.12e-13,68;UBERON:0002049,4.41e-11,78;UBERON:0007798,4.41e-11,78;UBERON:0004535,1.03e-07,109;UBERON:0001009,1.74e-07,112 | |||
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| ||
|short_description=p@chr6:74848034..74848043,+ | |short_description=p@chr6:74848034..74848043,+ | ||
}} | }} |
Latest revision as of 03:08, 31 July 2015
Short description: | p@chr6:74848034..74848043, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:74848034..74848043, + |
Coexpression cluster: | C4625_Endothelial_Lymphatic_cervical_Retinal_Preadipocyte_Mesenchymal_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphangioblast | 1.60e-85 | 6 |
endothelial cell of lymphatic vessel | 1.60e-85 | 6 |
vascular lymphangioblast | 1.60e-85 | 6 |
endothelial cell of vascular tree | 1.91e-37 | 24 |
meso-epithelial cell | 7.94e-25 | 45 |
endothelial cell | 8.74e-25 | 36 |
capillary endothelial cell | 6.50e-20 | 3 |
lining cell | 4.08e-19 | 58 |
barrier cell | 4.08e-19 | 58 |
follicular cell of ovary | 3.17e-15 | 1 |
granulosa cell | 3.17e-15 | 1 |
mesodermal cell | 9.11e-11 | 121 |
Ontology term | p-value | n |
---|---|---|
lymphatic vessel | 3.64e-64 | 8 |
lymph vasculature | 3.64e-64 | 8 |
lymphatic part of lymphoid system | 3.64e-64 | 8 |
lymphoid system | 2.44e-51 | 10 |
microcirculatory vessel | 6.50e-20 | 3 |
endothelium of capillary | 6.50e-20 | 3 |
capillary | 6.50e-20 | 3 |
vessel | 8.12e-13 | 68 |
vasculature | 4.41e-11 | 78 |
vascular system | 4.41e-11 | 78 |
cardiovascular system | 1.03e-07 | 109 |
circulatory system | 1.74e-07 | 112 |