FFCP PHASE1:Hg19::chr6:94508854..94508876,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:94508854..94508876,- | |||
|coexpression_cluster_id=C464 | |coexpression_cluster_id=C464 | ||
|description=CAGE_peak_at_chr6:94508854..94508876,- | |description=CAGE_peak_at_chr6:94508854..94508876,- | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002575!1.36e-12!2 | |ontology_enrichment_celltype=CL:0002575!1.36e-12!2 | ||
|ontology_enrichment_celltype_v019=CL:0000222;6.72e-26;1!CL:0002575;7.30e-14;2!CL:0002549;1.14e-13;2!CL:0000515;1.47e-09;3!CL:0002590;1.47e-09;3!CL:0000669;1.40e-07;4!CL:0002321;1.49e-07;15!CL:0000056;1.75e-07;4 | |ontology_enrichment_celltype_v019=CL:0000222;6.72e-26;1!CL:0002575;7.30e-14;2!CL:0002549;1.14e-13;2!CL:0000515;1.47e-09;3!CL:0002590;1.47e-09;3!CL:0000669;1.40e-07;4!CL:0002321;1.49e-07;15!CL:0000056;1.75e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002575,7.30e-14,2;CL:0002549,1.07e-13,2;CL:0002590,1.19e-09,3;CL:0000669,1.40e-07,4;CL:0000515,2.04e-07,4 | |||
|ontology_enrichment_development_v019=CL:0000515;1.75e-07;4 | |ontology_enrichment_development_v019=CL:0000515;1.75e-07;4 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4468;6.43e-14;2 | |ontology_enrichment_disease_v019=DOID:4468;6.43e-14;2 | ||
|ontology_enrichment_disease_v019_2=DOID:4468,6.43e-14,2 | |||
|ontology_enrichment_uberon=UBERON:0002113!5.32e-09!27;UBERON:0003918!5.32e-09!27;UBERON:0005095!5.32e-09!27;UBERON:0007687!5.32e-09!27;UBERON:0000489!1.87e-07!32 | |ontology_enrichment_uberon=UBERON:0002113!5.32e-09!27;UBERON:0003918!5.32e-09!27;UBERON:0005095!5.32e-09!27;UBERON:0007687!5.32e-09!27;UBERON:0000489!1.87e-07!32 | ||
|ontology_enrichment_uberon_v019=UBERON:0005284;1.10e-20;5!UBERON:0005629;1.14e-13;2!UBERON:0005358;1.14e-13;2!UBERON:0001886;1.14e-13;2!UBERON:0004086;1.14e-13;2!UBERON:0005282;1.14e-13;2!UBERON:0005281;1.14e-13;2!UBERON:0006876;5.79e-10;11 | |ontology_enrichment_uberon_v019=UBERON:0005284;1.10e-20;5!UBERON:0005629;1.14e-13;2!UBERON:0005358;1.14e-13;2!UBERON:0001886;1.14e-13;2!UBERON:0004086;1.14e-13;2!UBERON:0005282;1.14e-13;2!UBERON:0005281;1.14e-13;2!UBERON:0006876;5.79e-10;11 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005284,8.13e-21,5;UBERON:0005629,1.07e-13,2;UBERON:0005358,1.07e-13,2;UBERON:0001886,1.07e-13,2;UBERON:0004086,1.07e-13,2;UBERON:0005282,1.07e-13,2;UBERON:0005281,1.07e-13,2;UBERON:0006876,5.06e-10,11 | |||
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|short_description=p@chr6:94508854..94508876,- | |short_description=p@chr6:94508854..94508876,- | ||
}} | }} |
Latest revision as of 03:51, 31 July 2015
Short description: | p@chr6:94508854..94508876, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:94508854..94508876, - |
Coexpression cluster: | C464_clear_serous_pagetoid_squamous_chorionic_thyroid_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system pericyte | 7.30e-14 | 2 |
fibroblast of choroid plexus | 1.07e-13 | 2 |
smooth muscle cell of the brain vasculature | 1.19e-09 | 3 |
pericyte cell | 1.40e-07 | 4 |
skeletal muscle myoblast | 2.04e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
brain vasculature | 8.13e-21 | 5 |
vascular plexus | 1.07e-13 | 2 |
ventricle of nervous system | 1.07e-13 | 2 |
choroid plexus | 1.07e-13 | 2 |
brain ventricle | 1.07e-13 | 2 |
ventricular system of brain | 1.07e-13 | 2 |
ventricular system of central nervous system | 1.07e-13 | 2 |
vasculature of organ | 5.06e-10 | 11 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 6.43e-14 | 2 |