FFCP PHASE1:Hg19::chr8:124665994..124666002,-: Difference between revisions
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|id=chr8:124665994..124666002,-
|short_description=p@chr8:124665994..124666002,-
|description=CAGE_peak_at_chr8:124665994..124666002,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr8:124665994..124666002,- | |||
|coexpression_cluster_id=C618 | |||
|description=CAGE_peak_at_chr8:124665994..124666002,- | |||
|id=chr8:124665994..124666002,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010227;3.74e-18;1!UBERON:0004140;3.74e-18;1!UBERON:0010226;1.03e-17;1!UBERON:0008814;1.57e-09;2!UBERON:0010056;1.57e-09;2 | |||
|ontology_enrichment_disease=DOID:114!7.07e-09!2 | |||
|ontology_enrichment_disease_v019=DOID:114;1.38e-33;2!DOID:178;1.03e-17;1!DOID:326;1.03e-17;1!DOID:3978;1.03e-17;1!DOID:3394;1.03e-17;1!DOID:5844;1.03e-17;1!DOID:1287;2.38e-17;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,9.92e-34,2;DOID:178,1.03e-17,1;DOID:326,1.03e-17,1;DOID:3978,1.03e-17,1;DOID:3394,1.03e-17,1;DOID:5844,1.03e-17,1;DOID:1287,2.02e-17,4 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.21e-17!115;UBERON:0007100!3.31e-12!27;UBERON:0000341!8.87e-09!2;UBERON:0003103!1.18e-08!69;UBERON:0000481!3.93e-07!347;UBERON:0000078!6.46e-07!18;UBERON:0000948!8.96e-07!24;UBERON:0005498!8.96e-07!24;UBERON:0004140!8.96e-07!24;UBERON:0009881!8.96e-07!24;UBERON:0004141!8.96e-07!24;UBERON:0003084!8.96e-07!24;UBERON:0007005!8.96e-07!24;UBERON:0004139!8.96e-07!24;UBERON:0004291!8.96e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;6.49e-32;25!UBERON:0004151;4.60e-23;3!UBERON:0001723;8.98e-23;3!UBERON:0001033;8.98e-23;3!UBERON:0002079;3.74e-18;1!UBERON:0002084;1.03e-17;1!UBERON:0002146;1.03e-17;1!UBERON:0002082;1.03e-17;1!UBERON:0005623;1.03e-17;1!UBERON:0000948;2.10e-12;22!UBERON:0002081;9.46e-10;2!UBERON:0000341;1.57e-09;2!UBERON:0003103;7.33e-07;61!UBERON:0003978;9.11e-07;3!UBERON:0000946;9.11e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007100,1.77e-29,27;UBERON:0004151,6.44e-23,3;UBERON:0001723,7.20e-23,3;UBERON:0001033,7.20e-23,3;UBERON:0010056,7.20e-23,3;UBERON:0003103,6.08e-19,68;UBERON:0002079,4.44e-18,1;UBERON:0002084,1.44e-17,1;UBERON:0002082,1.44e-17,1;UBERON:0010226,1.44e-17,1;UBERON:0002146,1.70e-17,1;UBERON:0005623,1.70e-17,1;UBERON:0000948,2.45e-11,24;UBERON:0005498,2.45e-11,24;UBERON:0004140,2.45e-11,24;UBERON:0009881,2.45e-11,24;UBERON:0004141,2.45e-11,24;UBERON:0003084,2.45e-11,24;UBERON:0007005,2.45e-11,24;UBERON:0004139,2.45e-11,24;UBERON:0004291,2.45e-11,24;UBERON:0007023,4.95e-11,114;UBERON:0002081,1.03e-09,2;UBERON:0010227,1.03e-09,2;UBERON:0000341,1.44e-09,2;UBERON:0001042,1.57e-07,10;UBERON:0009145,1.57e-07,10;UBERON:0006562,6.35e-07,11;UBERON:0001009,8.16e-07,112 | |||
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| ||
|short_description=p@chr8:124665994..124666002,- | |||
}} | }} |
Latest revision as of 14:36, 31 July 2015
Short description: | p@chr8:124665994..124666002, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:124665994..124666002, - |
Coexpression cluster: | C618_skeletal_heart_left_diaphragm_throat_skin_maxillary |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
primary circulatory organ | 1.77e-29 | 27 |
cardiac chamber | 6.44e-23 | 3 |
tongue | 7.20e-23 | 3 |
gustatory system | 7.20e-23 | 3 |
future tongue | 7.20e-23 | 3 |
compound organ | 6.08e-19 | 68 |
left cardiac atrium | 4.44e-18 | 1 |
heart left ventricle | 1.44e-17 | 1 |
cardiac ventricle | 1.44e-17 | 1 |
future cardiac ventricle | 1.44e-17 | 1 |
pulmonary valve | 1.70e-17 | 1 |
semi-lunar valve | 1.70e-17 | 1 |
heart | 2.45e-11 | 24 |
primitive heart tube | 2.45e-11 | 24 |
primary heart field | 2.45e-11 | 24 |
anterior lateral plate mesoderm | 2.45e-11 | 24 |
heart tube | 2.45e-11 | 24 |
heart primordium | 2.45e-11 | 24 |
cardiac mesoderm | 2.45e-11 | 24 |
cardiogenic plate | 2.45e-11 | 24 |
heart rudiment | 2.45e-11 | 24 |
adult organism | 4.95e-11 | 114 |
cardiac atrium | 1.03e-09 | 2 |
future cardiac atrium | 1.03e-09 | 2 |
throat | 1.44e-09 | 2 |
chordate pharynx | 1.57e-07 | 10 |
pharyngeal region of foregut | 1.57e-07 | 10 |
pharynx | 6.35e-07 | 11 |
circulatory system | 8.16e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 9.92e-34 | 2 |
vascular disease | 1.03e-17 | 1 |
ischemia | 1.03e-17 | 1 |
extrinsic cardiomyopathy | 1.03e-17 | 1 |
myocardial ischemia | 1.03e-17 | 1 |
myocardial infarction | 1.03e-17 | 1 |
cardiovascular system disease | 2.02e-17 | 4 |