FFCP PHASE1:Hg19::chr8:22559141..22559159,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:22559141..22559159,- | |||
|coexpression_cluster_id=C342 | |||
|description=CAGE_peak_at_chr8:22559141..22559159,- | |description=CAGE_peak_at_chr8:22559141..22559159,- | ||
|id=chr8:22559141..22559159,- | |id=chr8:22559141..22559159,- | ||
|ontology_enrichment_celltype=CL:0000945!2.25e-53!24;CL:0000826!2.25e-53!24;CL:0000838!8.79e-28!52;CL:0000542!3.22e-27!53;CL:0000051!3.22e-27!53;CL:0000236!2.95e-16!14;CL:0002087!1.13e-12!119;CL:0002031!4.51e-12!124;CL:0000946!1.43e-10!1;CL:0000786!1.43e-10!1;CL:0000980!1.43e-10!1;CL:0000738!1.96e-10!140;CL:0002032!1.66e-08!165;CL:0000837!1.66e-08!165;CL:0000037!4.59e-08!172;CL:0000566!4.59e-08!172;CL:0000988!1.71e-07!182 | |ontology_enrichment_celltype=CL:0000945!2.25e-53!24;CL:0000826!2.25e-53!24;CL:0000838!8.79e-28!52;CL:0000542!3.22e-27!53;CL:0000051!3.22e-27!53;CL:0000236!2.95e-16!14;CL:0002087!1.13e-12!119;CL:0002031!4.51e-12!124;CL:0000946!1.43e-10!1;CL:0000786!1.43e-10!1;CL:0000980!1.43e-10!1;CL:0000738!1.96e-10!140;CL:0002032!1.66e-08!165;CL:0000837!1.66e-08!165;CL:0000037!4.59e-08!172;CL:0000566!4.59e-08!172;CL:0000988!1.71e-07!182 | ||
|ontology_enrichment_celltype_v019=CL:0000945;4.34e-66;24!CL:0000946;6.98e-21;1!CL:0000786;6.98e-21;1!CL:0000542;3.33e-12;53!CL:0000236;5.59e-07;13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,4.51e-66,24;CL:0000826,4.51e-66,24;CL:0000838,2.01e-30,52;CL:0000542,7.62e-30,53;CL:0000051,7.62e-30,53;CL:0000946,7.72e-21,1;CL:0000786,7.72e-21,1;CL:0000980,7.72e-21,1;CL:0002087,1.86e-13,115;CL:0000236,3.03e-13,14;CL:0002031,6.97e-13,120;CL:0000738,2.51e-11,136;CL:0000785,4.09e-11,2;CL:0000955,4.09e-11,2;CL:0000818,4.09e-11,2;CL:0000954,4.09e-11,2;CL:0000816,4.09e-11,2;CL:0002032,1.68e-09,161;CL:0000837,1.68e-09,161;CL:0000037,4.36e-09,168;CL:0000988,1.34e-08,177;CL:0000817,7.76e-08,3 | |||
|ontology_enrichment_development_v019=CL:0000051;3.33e-12;53!CL:0000954;3.89e-11;2 | |||
|ontology_enrichment_disease=DOID:0060058!7.46e-15!10;DOID:630!6.73e-11!1;DOID:0050177!6.73e-11!1;DOID:0050427!6.73e-11!1;DOID:2355!7.40e-11!1 | |||
|ontology_enrichment_disease_v019=DOID:630;1.53e-21;1!DOID:0050177;1.53e-21;1!DOID:0050427;1.53e-21;1!DOID:2355;1.88e-21;1!DOID:74;2.02e-11;2!DOID:0060058;6.41e-09;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,1.53e-21,1;DOID:0050177,1.53e-21,1;DOID:0050427,1.53e-21,1;DOID:2355,1.88e-21,1;DOID:74,2.02e-11,2;DOID:0060058,6.28e-09,10 | |||
|ontology_enrichment_uberon=UBERON:0002106!1.71e-27!3;UBERON:0004854!1.71e-27!3;UBERON:0009034!1.71e-27!3;UBERON:0002095!1.71e-27!3;UBERON:0004782!1.71e-27!3;UBERON:0003281!1.71e-27!3;UBERON:0009664!1.71e-27!3;UBERON:0002296!1.71e-27!3;UBERON:0005602!1.71e-27!3;UBERON:0001179!1.71e-27!3;UBERON:0006293!1.71e-27!3;UBERON:0004177!3.82e-12!7;UBERON:0000945!1.08e-10!8;UBERON:0010039!1.08e-10!8;UBERON:0000029!2.28e-10!1;UBERON:0001154!3.29e-10!1;UBERON:0001153!3.29e-10!1;UBERON:0002372!4.75e-10!1;UBERON:0001961!4.75e-10!1;UBERON:0001744!4.75e-10!1;UBERON:0001735!4.75e-10!1;UBERON:0004457!2.70e-07!12;UBERON:0000042!2.70e-07!12 | |ontology_enrichment_uberon=UBERON:0002106!1.71e-27!3;UBERON:0004854!1.71e-27!3;UBERON:0009034!1.71e-27!3;UBERON:0002095!1.71e-27!3;UBERON:0004782!1.71e-27!3;UBERON:0003281!1.71e-27!3;UBERON:0009664!1.71e-27!3;UBERON:0002296!1.71e-27!3;UBERON:0005602!1.71e-27!3;UBERON:0001179!1.71e-27!3;UBERON:0006293!1.71e-27!3;UBERON:0004177!3.82e-12!7;UBERON:0000945!1.08e-10!8;UBERON:0010039!1.08e-10!8;UBERON:0000029!2.28e-10!1;UBERON:0001154!3.29e-10!1;UBERON:0001153!3.29e-10!1;UBERON:0002372!4.75e-10!1;UBERON:0001961!4.75e-10!1;UBERON:0001744!4.75e-10!1;UBERON:0001735!4.75e-10!1;UBERON:0004457!2.70e-07!12;UBERON:0000042!2.70e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;7.50e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,7.26e-08,3;UBERON:0004854,7.26e-08,3;UBERON:0009034,7.26e-08,3;UBERON:0002095,7.26e-08,3;UBERON:0004782,7.26e-08,3;UBERON:0003281,7.26e-08,3;UBERON:0009664,7.26e-08,3;UBERON:0002296,7.26e-08,3;UBERON:0005602,7.26e-08,3;UBERON:0001179,7.26e-08,3;UBERON:0006293,7.26e-08,3 | |||
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|short_description=p@chr8:22559141..22559159,- | |short_description=p@chr8:22559141..22559159,- | ||
}} | }} |
Latest revision as of 17:02, 31 July 2015
Short description: | p@chr8:22559141..22559159, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:22559141..22559159, - |
Coexpression cluster: | C342_xeroderma_b_B_splenic_plasma_Burkitt_thymus |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 4.51e-66 | 24 |
pro-B cell | 4.51e-66 | 24 |
lymphoid lineage restricted progenitor cell | 2.01e-30 | 52 |
lymphocyte | 7.62e-30 | 53 |
common lymphoid progenitor | 7.62e-30 | 53 |
antibody secreting cell | 7.72e-21 | 1 |
plasma cell | 7.72e-21 | 1 |
plasmablast | 7.72e-21 | 1 |
nongranular leukocyte | 1.86e-13 | 115 |
B cell | 3.03e-13 | 14 |
hematopoietic lineage restricted progenitor cell | 6.97e-13 | 120 |
leukocyte | 2.51e-11 | 136 |
mature B cell | 4.09e-11 | 2 |
pre-B-II cell | 4.09e-11 | 2 |
transitional stage B cell | 4.09e-11 | 2 |
small pre-B-II cell | 4.09e-11 | 2 |
immature B cell | 4.09e-11 | 2 |
hematopoietic oligopotent progenitor cell | 1.68e-09 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-09 | 161 |
hematopoietic stem cell | 4.36e-09 | 168 |
hematopoietic cell | 1.34e-08 | 177 |
precursor B cell | 7.76e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
spleen | 7.26e-08 | 3 |
gastrointestinal system mesentery | 7.26e-08 | 3 |
stomach region | 7.26e-08 | 3 |
mesentery | 7.26e-08 | 3 |
gastrointestinal system serosa | 7.26e-08 | 3 |
mesentery of stomach | 7.26e-08 | 3 |
gut mesentery | 7.26e-08 | 3 |
dorsal mesentery | 7.26e-08 | 3 |
dorsal mesogastrium | 7.26e-08 | 3 |
peritoneal cavity | 7.26e-08 | 3 |
spleen primordium | 7.26e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.53e-21 | 1 |
monogenic disease | 1.53e-21 | 1 |
xeroderma pigmentosum | 1.53e-21 | 1 |
anemia | 1.88e-21 | 1 |
hematopoietic system disease | 2.02e-11 | 2 |
lymphoma | 6.28e-09 | 10 |