FFCP PHASE1:Hg19::chr8:23584449..23584459,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:23584449..23584459,- | |||
|coexpression_cluster_id=C336 | |coexpression_cluster_id=C336 | ||
|description=CAGE_peak_at_chr8:23584449..23584459,- | |description=CAGE_peak_at_chr8:23584449..23584459,- | ||
|id=chr8:23584449..23584459,- | |id=chr8:23584449..23584459,- | ||
|ontology_enrichment_celltype=CL:0000083!3.59e-08!4;CL:0002620!8.13e-08!23 | |ontology_enrichment_celltype=CL:0000083!3.59e-08!4;CL:0002620!8.13e-08!23 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0010226;6.62e-41;1!UBERON:0004140;1.81e-40;1!UBERON:0010227;3.30e-40;1!UBERON:0004872;5.86e-07;7 | |||
|ontology_enrichment_disease=DOID:114!1.87e-16!2;DOID:4929!1.43e-15!2;DOID:17!8.14e-14!5;DOID:450!8.14e-14!5;DOID:66!8.14e-14!5;DOID:423!8.14e-14!5;DOID:0080000!8.14e-14!5;DOID:11722!8.14e-14!5;DOID:178!4.89e-09!1;DOID:326!4.89e-09!1;DOID:3978!4.89e-09!1;DOID:3394!4.89e-09!1;DOID:5844!4.89e-09!1;DOID:3369!6.16e-09!1;DOID:1287!1.14e-08!4;DOID:4235!1.22e-08!1;DOID:1793!3.59e-08!4 | |ontology_enrichment_disease=DOID:114!1.87e-16!2;DOID:4929!1.43e-15!2;DOID:17!8.14e-14!5;DOID:450!8.14e-14!5;DOID:66!8.14e-14!5;DOID:423!8.14e-14!5;DOID:0080000!8.14e-14!5;DOID:11722!8.14e-14!5;DOID:178!4.89e-09!1;DOID:326!4.89e-09!1;DOID:3978!4.89e-09!1;DOID:3394!4.89e-09!1;DOID:5844!4.89e-09!1;DOID:3369!6.16e-09!1;DOID:1287!1.14e-08!4;DOID:4235!1.22e-08!1;DOID:1793!3.59e-08!4 | ||
|ontology_enrichment_disease_v019=DOID:114;5.15e-21;2!DOID:1287;3.26e-11;4 | |||
|ontology_enrichment_disease_v019_2=DOID:114,5.70e-21,2;DOID:1287,3.42e-11,4 | |||
|ontology_enrichment_uberon=UBERON:0004151!7.29e-24!3;UBERON:0003978!1.45e-23!3;UBERON:0009751!1.45e-23!3;UBERON:0000946!1.45e-23!3;UBERON:0002523!1.45e-23!3;UBERON:0005983!1.45e-23!3;UBERON:0002165!1.45e-23!3;UBERON:0002062!1.45e-23!3;UBERON:0007280!1.45e-23!3;UBERON:0007100!9.04e-22!27;UBERON:0002081!2.17e-16!2;UBERON:0002133!2.35e-16!2;UBERON:0000948!4.25e-11!24;UBERON:0005498!4.25e-11!24;UBERON:0004140!4.25e-11!24;UBERON:0009881!4.25e-11!24;UBERON:0004141!4.25e-11!24;UBERON:0003084!4.25e-11!24;UBERON:0007005!4.25e-11!24;UBERON:0004139!4.25e-11!24;UBERON:0004291!4.25e-11!24;UBERON:0002084!3.06e-09!1;UBERON:0002082!3.06e-09!1;UBERON:0004706!3.06e-09!1;UBERON:0002079!4.19e-09!1;UBERON:0002135!4.52e-09!1;UBERON:0002134!5.28e-09!1;UBERON:0005208!5.28e-09!1;UBERON:0005946!5.28e-09!1;UBERON:0005965!5.28e-09!1;UBERON:0002078!5.28e-09!1;UBERON:0002146!5.70e-09!1;UBERON:0005623!5.70e-09!1;UBERON:0004913!6.65e-09!1;UBERON:0003703!6.65e-09!1;UBERON:0001174!6.65e-09!1;UBERON:0004914!6.65e-09!1;UBERON:0003103!1.16e-07!69 | |ontology_enrichment_uberon=UBERON:0004151!7.29e-24!3;UBERON:0003978!1.45e-23!3;UBERON:0009751!1.45e-23!3;UBERON:0000946!1.45e-23!3;UBERON:0002523!1.45e-23!3;UBERON:0005983!1.45e-23!3;UBERON:0002165!1.45e-23!3;UBERON:0002062!1.45e-23!3;UBERON:0007280!1.45e-23!3;UBERON:0007100!9.04e-22!27;UBERON:0002081!2.17e-16!2;UBERON:0002133!2.35e-16!2;UBERON:0000948!4.25e-11!24;UBERON:0005498!4.25e-11!24;UBERON:0004140!4.25e-11!24;UBERON:0009881!4.25e-11!24;UBERON:0004141!4.25e-11!24;UBERON:0003084!4.25e-11!24;UBERON:0007005!4.25e-11!24;UBERON:0004139!4.25e-11!24;UBERON:0004291!4.25e-11!24;UBERON:0002084!3.06e-09!1;UBERON:0002082!3.06e-09!1;UBERON:0004706!3.06e-09!1;UBERON:0002079!4.19e-09!1;UBERON:0002135!4.52e-09!1;UBERON:0002134!5.28e-09!1;UBERON:0005208!5.28e-09!1;UBERON:0005946!5.28e-09!1;UBERON:0005965!5.28e-09!1;UBERON:0002078!5.28e-09!1;UBERON:0002146!5.70e-09!1;UBERON:0005623!5.70e-09!1;UBERON:0004913!6.65e-09!1;UBERON:0003703!6.65e-09!1;UBERON:0001174!6.65e-09!1;UBERON:0004914!6.65e-09!1;UBERON:0003103!1.16e-07!69 | ||
|ontology_enrichment_uberon_v019=UBERON:0004151;2.87e-53;3!UBERON:0002084;6.62e-41;1!UBERON:0002082;6.62e-41;1!UBERON:0002079;3.30e-40;1!UBERON:0007100;6.36e-40;25!UBERON:0002081;6.96e-21;2!UBERON:0000948;5.56e-17;22!UBERON:0003103;1.05e-08;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,2.87e-53,3;UBERON:0002084,6.62e-41,1;UBERON:0002082,6.62e-41,1;UBERON:0010226,6.62e-41,1;UBERON:0002079,3.30e-40,1;UBERON:0007100,4.92e-37,27;UBERON:0002081,6.96e-21,2;UBERON:0010227,6.96e-21,2;UBERON:0000948,1.19e-15,24;UBERON:0005498,1.19e-15,24;UBERON:0004140,1.19e-15,24;UBERON:0009881,1.19e-15,24;UBERON:0004141,1.19e-15,24;UBERON:0003084,1.19e-15,24;UBERON:0007005,1.19e-15,24;UBERON:0004139,1.19e-15,24;UBERON:0004291,1.19e-15,24;UBERON:0003103,3.48e-15,68;UBERON:0001009,1.80e-09,112 | |||
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|short_description=p@chr8:23584449..23584459,- | |short_description=p@chr8:23584449..23584459,- | ||
}} | }} |
Latest revision as of 17:12, 31 July 2015
Short description: | p@chr8:23584449..23584459, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:23584449..23584459, - |
Coexpression cluster: | C336_left_heart_skeletal_breast_lung_mature_adipose |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 2.87e-53 | 3 |
heart left ventricle | 6.62e-41 | 1 |
cardiac ventricle | 6.62e-41 | 1 |
future cardiac ventricle | 6.62e-41 | 1 |
left cardiac atrium | 3.30e-40 | 1 |
primary circulatory organ | 4.92e-37 | 27 |
cardiac atrium | 6.96e-21 | 2 |
future cardiac atrium | 6.96e-21 | 2 |
heart | 1.19e-15 | 24 |
primitive heart tube | 1.19e-15 | 24 |
primary heart field | 1.19e-15 | 24 |
anterior lateral plate mesoderm | 1.19e-15 | 24 |
heart tube | 1.19e-15 | 24 |
heart primordium | 1.19e-15 | 24 |
cardiac mesoderm | 1.19e-15 | 24 |
cardiogenic plate | 1.19e-15 | 24 |
heart rudiment | 1.19e-15 | 24 |
compound organ | 3.48e-15 | 68 |
circulatory system | 1.80e-09 | 112 |
Ontology term | p-value | n |
---|---|---|
heart disease | 5.70e-21 | 2 |
cardiovascular system disease | 3.42e-11 | 4 |