FFCP PHASE1:Hg19::chr8:36807609..36807626,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:36807609..36807626,- | |||
|coexpression_cluster_id=C369 | |coexpression_cluster_id=C369 | ||
|description=CAGE_peak_at_chr8:36807609..36807626,- | |description=CAGE_peak_at_chr8:36807609..36807626,- | ||
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|ontology_enrichment_celltype=CL:0000064!6.03e-16!3;CL:0005012!6.03e-16!3;CL:0000067!6.03e-16!3;CL:0002304!6.03e-16!3;CL:0002322!1.23e-15!5;CL:0000075!2.96e-08!27;CL:0002573!4.59e-08!2;CL:0000221!2.10e-07!71 | |ontology_enrichment_celltype=CL:0000064!6.03e-16!3;CL:0005012!6.03e-16!3;CL:0000067!6.03e-16!3;CL:0002304!6.03e-16!3;CL:0002322!1.23e-15!5;CL:0000075!2.96e-08!27;CL:0002573!4.59e-08!2;CL:0000221!2.10e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0002573;1.98e-30;2!CL:0000047;3.06e-12;2!CL:0000064;1.00e-08;3!CL:0000067;1.00e-08;3!CL:0005012;1.00e-08;3!CL:0002304;1.00e-08;3!CL:0002319;5.18e-08;25!CL:0000306;6.50e-07;4!CL:0002222;6.50e-07;4!CL:0002224;6.50e-07;4!CL:0000083;9.36e-07;4 | |ontology_enrichment_celltype_v019=CL:0002573;1.98e-30;2!CL:0000047;3.06e-12;2!CL:0000064;1.00e-08;3!CL:0000067;1.00e-08;3!CL:0005012;1.00e-08;3!CL:0002304;1.00e-08;3!CL:0002319;5.18e-08;25!CL:0000306;6.50e-07;4!CL:0002222;6.50e-07;4!CL:0002224;6.50e-07;4!CL:0000083;9.36e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002573,1.98e-30,2;CL:0000064,9.66e-09,3;CL:0000067,9.66e-09,3;CL:0005012,9.66e-09,3;CL:0002304,9.66e-09,3;CL:0002319,5.37e-08,25;CL:0000306,6.50e-07,4;CL:0002222,6.50e-07,4;CL:0002224,6.50e-07,4;CL:0000083,9.11e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:4074;3.06e-12;2!DOID:4905;3.06e-12;2!DOID:3498;3.06e-12;2!DOID:1793;9.36e-07;4 | |ontology_enrichment_disease_v019=DOID:4074;3.06e-12;2!DOID:4905;3.06e-12;2!DOID:3498;3.06e-12;2!DOID:1793;9.36e-07;4 | ||
|ontology_enrichment_disease_v019_2=DOID:4074,2.90e-12,2;DOID:4905,2.90e-12,2;DOID:3498,2.90e-12,2;DOID:1793,9.11e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0002298!2.64e-30!8;UBERON:0004733!5.58e-26!12;UBERON:0002028!5.58e-26!12;UBERON:0007277!5.58e-26!12;UBERON:0003076!8.83e-26!15;UBERON:0003057!8.83e-26!15;UBERON:0004732!6.95e-24!13;UBERON:0000488!1.07e-20!4;UBERON:0000988!2.68e-16!3;UBERON:0000153!3.32e-16!129;UBERON:0007811!3.32e-16!129;UBERON:0007625!3.53e-16!11;UBERON:0001778!6.03e-16!3;UBERON:0001775!6.03e-16!3;UBERON:0001896!6.66e-16!3;UBERON:0005290!6.66e-16!3;UBERON:0010096!6.66e-16!3;UBERON:0006331!9.95e-16!3;UBERON:0003075!1.64e-14!86;UBERON:0007284!1.64e-14!86;UBERON:0002680!4.87e-14!9;UBERON:0001895!4.87e-14!9;UBERON:0010092!4.87e-14!9;UBERON:0002203!7.59e-14!6;UBERON:0001768!7.59e-14!6;UBERON:0004121!8.47e-14!169;UBERON:0002346!1.07e-13!90;UBERON:0000924!2.36e-13!173;UBERON:0006601!2.36e-13!173;UBERON:0000033!1.00e-12!123;UBERON:0001801!1.40e-12!14;UBERON:0002148!2.22e-11!2;UBERON:0009662!2.22e-11!2;UBERON:0000063!4.83e-11!97;UBERON:0002370!5.23e-11!4;UBERON:0005058!5.23e-11!4;UBERON:0009113!5.23e-11!4;UBERON:0003295!5.23e-11!4;UBERON:0005562!5.23e-11!4;UBERON:0001049!7.15e-10!57;UBERON:0005068!7.15e-10!57;UBERON:0006241!7.15e-10!57;UBERON:0007135!7.15e-10!57;UBERON:0000073!1.29e-09!94;UBERON:0001016!1.29e-09!94;UBERON:0000019!4.19e-09!19;UBERON:0000047!4.19e-09!19;UBERON:0004088!4.19e-09!19;UBERON:0003072!4.19e-09!19;UBERON:0003071!4.19e-09!19;UBERON:0004128!4.19e-09!19;UBERON:0000970!1.29e-08!20;UBERON:0001017!1.51e-08!82;UBERON:0002104!3.55e-08!21;UBERON:0001456!3.55e-08!21;UBERON:0005743!4.96e-08!86;UBERON:0002616!6.69e-08!59;UBERON:0000974!8.04e-08!10;UBERON:0000955!1.32e-07!69;UBERON:0006238!1.32e-07!69;UBERON:0002200!1.40e-07!11;UBERON:0006876!1.40e-07!11;UBERON:0000064!1.44e-07!219;UBERON:0003351!1.69e-07!6;UBERON:0000020!2.07e-07!23;UBERON:0001032!4.49e-07!24;UBERON:0004456!4.49e-07!24;UBERON:0001444!6.52e-07!48 | |ontology_enrichment_uberon=UBERON:0002298!2.64e-30!8;UBERON:0004733!5.58e-26!12;UBERON:0002028!5.58e-26!12;UBERON:0007277!5.58e-26!12;UBERON:0003076!8.83e-26!15;UBERON:0003057!8.83e-26!15;UBERON:0004732!6.95e-24!13;UBERON:0000488!1.07e-20!4;UBERON:0000988!2.68e-16!3;UBERON:0000153!3.32e-16!129;UBERON:0007811!3.32e-16!129;UBERON:0007625!3.53e-16!11;UBERON:0001778!6.03e-16!3;UBERON:0001775!6.03e-16!3;UBERON:0001896!6.66e-16!3;UBERON:0005290!6.66e-16!3;UBERON:0010096!6.66e-16!3;UBERON:0006331!9.95e-16!3;UBERON:0003075!1.64e-14!86;UBERON:0007284!1.64e-14!86;UBERON:0002680!4.87e-14!9;UBERON:0001895!4.87e-14!9;UBERON:0010092!4.87e-14!9;UBERON:0002203!7.59e-14!6;UBERON:0001768!7.59e-14!6;UBERON:0004121!8.47e-14!169;UBERON:0002346!1.07e-13!90;UBERON:0000924!2.36e-13!173;UBERON:0006601!2.36e-13!173;UBERON:0000033!1.00e-12!123;UBERON:0001801!1.40e-12!14;UBERON:0002148!2.22e-11!2;UBERON:0009662!2.22e-11!2;UBERON:0000063!4.83e-11!97;UBERON:0002370!5.23e-11!4;UBERON:0005058!5.23e-11!4;UBERON:0009113!5.23e-11!4;UBERON:0003295!5.23e-11!4;UBERON:0005562!5.23e-11!4;UBERON:0001049!7.15e-10!57;UBERON:0005068!7.15e-10!57;UBERON:0006241!7.15e-10!57;UBERON:0007135!7.15e-10!57;UBERON:0000073!1.29e-09!94;UBERON:0001016!1.29e-09!94;UBERON:0000019!4.19e-09!19;UBERON:0000047!4.19e-09!19;UBERON:0004088!4.19e-09!19;UBERON:0003072!4.19e-09!19;UBERON:0003071!4.19e-09!19;UBERON:0004128!4.19e-09!19;UBERON:0000970!1.29e-08!20;UBERON:0001017!1.51e-08!82;UBERON:0002104!3.55e-08!21;UBERON:0001456!3.55e-08!21;UBERON:0005743!4.96e-08!86;UBERON:0002616!6.69e-08!59;UBERON:0000974!8.04e-08!10;UBERON:0000955!1.32e-07!69;UBERON:0006238!1.32e-07!69;UBERON:0002200!1.40e-07!11;UBERON:0006876!1.40e-07!11;UBERON:0000064!1.44e-07!219;UBERON:0003351!1.69e-07!6;UBERON:0000020!2.07e-07!23;UBERON:0001032!4.49e-07!24;UBERON:0004456!4.49e-07!24;UBERON:0001444!6.52e-07!48 | ||
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|ontology_enrichment_uberon_v019_2=UBERON:0000010,7.58e-11,8;UBERON:0007625,4.25e-09,11;UBERON:0001778,9.66e-09,3;UBERON:0001775,9.66e-09,3;UBERON:0000988,1.21e-08,3;UBERON:0001801,2.44e-07,14;UBERON:0010077,6.50e-07,4;UBERON:0005389,6.50e-07,4;UBERON:0000484,6.50e-07,4;UBERON:0002546,6.50e-07,4;UBERON:0000965,6.50e-07,4;UBERON:0001803,6.50e-07,4;UBERON:0003073,6.50e-07,4;UBERON:0005426,6.50e-07,4;UBERON:0000488,7.27e-07,4;UBERON:0003343,9.63e-07,4;UBERON:0004785,9.63e-07,4 | |||
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|short_description=p@chr8:36807609..36807626,- | |short_description=p@chr8:36807609..36807626,- | ||
}} | }} |
Latest revision as of 18:03, 31 July 2015
Short description: | p@chr8:36807609..36807626, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:36807609..36807626, - |
Coexpression cluster: | C369_Lens_eye_Ciliary_retina_H9_Retinal_Renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Schwann cell | 1.98e-30 | 2 |
ciliated cell | 9.66e-09 | 3 |
ciliated epithelial cell | 9.66e-09 | 3 |
multi-ciliated epithelial cell | 9.66e-09 | 3 |
non-pigmented ciliary epithelial cell | 9.66e-09 | 3 |
neural cell | 5.37e-08 | 25 |
crystallin accumulating cell | 6.50e-07 | 4 |
vertebrate lens cell | 6.50e-07 | 4 |
lens epithelial cell | 6.50e-07 | 4 |
epithelial cell of pancreas | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 7.58e-11 | 8 |
pigment epithelium of eye | 4.25e-09 | 11 |
ciliary epithelium | 9.66e-09 | 3 |
ciliary body | 9.66e-09 | 3 |
pons | 1.21e-08 | 3 |
anterior segment of eyeball | 2.44e-07 | 14 |
cuboidal epithelium | 6.50e-07 | 4 |
transparent eye structure | 6.50e-07 | 4 |
simple cuboidal epithelium | 6.50e-07 | 4 |
cranial placode | 6.50e-07 | 4 |
lens of camera-type eye | 6.50e-07 | 4 |
epithelium of lens | 6.50e-07 | 4 |
lens placode | 6.50e-07 | 4 |
lens vesicle | 6.50e-07 | 4 |
atypical epithelium | 7.27e-07 | 4 |
mucosa of oral region | 9.63e-07 | 4 |
respiratory system mucosa | 9.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
pancreas adenocarcinoma | 2.90e-12 | 2 |
pancreatic carcinoma | 2.90e-12 | 2 |
pancreatic ductal adenocarcinoma | 2.90e-12 | 2 |
pancreatic cancer | 9.11e-07 | 4 |