FFCP PHASE1:Hg19::chr8:52886175..52886189,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr8:52886175..52886189,+ | |||
|coexpression_cluster_id=C2372 | |coexpression_cluster_id=C2372 | ||
|description=CAGE_peak_at_chr8:52886175..52886189,+ | |description=CAGE_peak_at_chr8:52886175..52886189,+ | ||
|id=chr8:52886175..52886189,+ | |id=chr8:52886175..52886189,+ | ||
|ontology_enrichment_celltype=CL:0002178!4.68e-09!3;CL:0000313!1.95e-07!1 | |ontology_enrichment_celltype=CL:0002178!4.68e-09!3;CL:0000313!1.95e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0002535;3.02e-11;2!CL:0002178;8.02e-08;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002535,2.47e-11,2;CL:0002178,8.29e-08,3 | |||
|ontology_enrichment_development_v019=UBERON:0007297;4.30e-11;2!UBERON:0003918;5.92e-09;10!UBERON:0007687;5.92e-09;10 | |||
|ontology_enrichment_disease=DOID:3493!1.01e-12!2;DOID:299!3.89e-08!25;DOID:2152!1.95e-07!1 | |ontology_enrichment_disease=DOID:3493!1.01e-12!2;DOID:299!3.89e-08!25;DOID:2152!1.95e-07!1 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005409!1.76e-12!35;UBERON:0002113!1.62e-10!27;UBERON:0003918!1.62e-10!27;UBERON:0005095!1.62e-10!27;UBERON:0007687!1.62e-10!27;UBERON:0000160!4.38e-10!27;UBERON:0006947!2.87e-09!3;UBERON:0004054!2.87e-09!3;UBERON:0003135!3.68e-09!11;UBERON:0003133!8.45e-09!48;UBERON:0000489!9.81e-09!32;UBERON:0005156!1.69e-08!59;UBERON:0000990!1.69e-08!59;UBERON:0000080!2.01e-08!18;UBERON:0002120!2.01e-08!18;UBERON:0004875!2.01e-08!18;UBERON:0005721!2.01e-08!18;UBERON:0005754!2.01e-08!18;UBERON:0007297!2.01e-08!18;UBERON:0003886!5.52e-08!63;UBERON:0006554!7.60e-08!44;UBERON:0001301!1.10e-07!1;UBERON:0001008!1.21e-07!45;UBERON:0004876!1.48e-07!20;UBERON:0006834!1.72e-07!1;UBERON:0000998!1.83e-07!1;UBERON:0006868!1.83e-07!1;UBERON:0004911!1.95e-07!1;UBERON:0000473!2.02e-07!8;UBERON:0003887!3.50e-07!21;UBERON:0005904!3.74e-07!4;UBERON:0002553!5.12e-07!70;UBERON:0000991!5.37e-07!21;UBERON:0009196!5.37e-07!21;UBERON:0009117!5.37e-07!21;UBERON:0005564!5.37e-07!21;UBERON:0002108!5.75e-07!14;UBERON:0003101!9.97e-07!22;UBERON:0000079!9.97e-07!22 | |ontology_enrichment_uberon=UBERON:0005409!1.76e-12!35;UBERON:0002113!1.62e-10!27;UBERON:0003918!1.62e-10!27;UBERON:0005095!1.62e-10!27;UBERON:0007687!1.62e-10!27;UBERON:0000160!4.38e-10!27;UBERON:0006947!2.87e-09!3;UBERON:0004054!2.87e-09!3;UBERON:0003135!3.68e-09!11;UBERON:0003133!8.45e-09!48;UBERON:0000489!9.81e-09!32;UBERON:0005156!1.69e-08!59;UBERON:0000990!1.69e-08!59;UBERON:0000080!2.01e-08!18;UBERON:0002120!2.01e-08!18;UBERON:0004875!2.01e-08!18;UBERON:0005721!2.01e-08!18;UBERON:0005754!2.01e-08!18;UBERON:0007297!2.01e-08!18;UBERON:0003886!5.52e-08!63;UBERON:0006554!7.60e-08!44;UBERON:0001301!1.10e-07!1;UBERON:0001008!1.21e-07!45;UBERON:0004876!1.48e-07!20;UBERON:0006834!1.72e-07!1;UBERON:0000998!1.83e-07!1;UBERON:0006868!1.83e-07!1;UBERON:0004911!1.95e-07!1;UBERON:0000473!2.02e-07!8;UBERON:0003887!3.50e-07!21;UBERON:0005904!3.74e-07!4;UBERON:0002553!5.12e-07!70;UBERON:0000991!5.37e-07!21;UBERON:0009196!5.37e-07!21;UBERON:0009117!5.37e-07!21;UBERON:0005564!5.37e-07!21;UBERON:0002108!5.75e-07!14;UBERON:0003101!9.97e-07!22;UBERON:0000079!9.97e-07!22 | ||
|ontology_enrichment_uberon_v019=UBERON:0001301;8.53e-21;1!UBERON:0002108;8.14e-17;4!UBERON:0006955;3.02e-11;2!UBERON:0004801;3.02e-11;2!UBERON:0005409;2.33e-08;22!UBERON:0002114;6.34e-08;2!UBERON:0006947;8.02e-08;3!UBERON:0004054;8.02e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001301,7.72e-21,1;UBERON:0002108,8.82e-17,4;UBERON:0006955,2.47e-11,2;UBERON:0004801,2.47e-11,2;UBERON:0002114,6.34e-08,2;UBERON:0006947,7.76e-08,3;UBERON:0004054,7.76e-08,3;UBERON:0002113,1.67e-07,26;UBERON:0003918,1.67e-07,26;UBERON:0011143,1.67e-07,26;UBERON:0005095,1.67e-07,26;UBERON:0007687,1.67e-07,26;UBERON:0005409,1.91e-07,25 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77126022639704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15272333723285,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,2.75819975547194,4.24882163893485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,4.68908406739856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.335566295393377,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.694567422971502,2.62271472604749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488965776731466,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.03017567021455,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.245976877086227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.902399225814824,0,0,0,0,0,0,0,0,0,0.501689773854853,0.254876273045038,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.77126022639704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0.176915129006678,0.611030144933625,0,0,0,0,0,0,0,0,0,0,7.25944296291983,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22308667769421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.15272333723285,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0,0,0,0,0,0,0,0,0,0,0,0,2.75819975547194,4.24882163893485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,4.68908406739856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0.335566295393377,0.098150233615243,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0.694567422971502,2.62271472604749,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.645134202577,0,0,0,0,0,0,0,0,0,0,0.227336094654718,0.535928260312357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.488965776731466,0,0,0,0 | ||
|short_description=p@chr8:52886175..52886189,+ | |short_description=p@chr8:52886175..52886189,+ | ||
}} | }} |
Latest revision as of 18:48, 31 July 2015
Short description: | p@chr8:52886175..52886189, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr8:52886175..52886189, + |
Coexpression cluster: | C2372_pancreas_kidney_duodenum_small_temporal_Intestinal_colon |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of cervix | 2.47e-11 | 2 |
epithelial cell of stomach | 8.29e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epididymis | 7.72e-21 | 1 |
small intestine | 8.82e-17 | 4 |
uterine epithelium | 2.47e-11 | 2 |
cervix epithelium | 2.47e-11 | 2 |
duodenum | 6.34e-08 | 2 |
male genital duct | 7.76e-08 | 3 |
internal male genitalia | 7.76e-08 | 3 |
kidney | 1.67e-07 | 26 |
kidney mesenchyme | 1.67e-07 | 26 |
upper urinary tract | 1.67e-07 | 26 |
kidney rudiment | 1.67e-07 | 26 |
kidney field | 1.67e-07 | 26 |
gastrointestinal system | 1.91e-07 | 25 |