FFCP PHASE1:Hg19::chr9:100686938..100686967,+: Difference between revisions
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|id=chr9:100686938..100686967,+
|short_description=p@chr9:100686938..100686967,+
|description=CAGE_peak_at_chr9:100686938..100686967,+
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:100686938..100686967,+ | |||
|coexpression_cluster_id=C553 | |||
|description=CAGE_peak_at_chr9:100686938..100686967,+ | |||
|id=chr9:100686938..100686967,+ | |||
|ontology_enrichment_celltype=CL:0000763!1.42e-21!112;CL:0000049!1.42e-21!112;CL:0000988!1.90e-17!182;CL:0000037!4.48e-17!172;CL:0000566!4.48e-17!172;CL:0002032!2.79e-16!165;CL:0000837!2.79e-16!165;CL:0002057!2.99e-15!42;CL:0000860!4.23e-14!45;CL:0000557!1.83e-11!71;CL:0002393!6.92e-11!9;CL:0002397!6.92e-11!9;CL:0002009!8.66e-11!65;CL:0000766!1.35e-10!76;CL:0000839!7.91e-10!70;CL:0002194!2.52e-09!63;CL:0000576!2.52e-09!63;CL:0000040!2.52e-09!63;CL:0000559!2.52e-09!63;CL:0000875!7.91e-09!3;CL:0002396!7.91e-09!3;CL:0001024!7.03e-08!1;CL:0002031!1.00e-07!124;CL:0000738!1.30e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000037;1.34e-23;1!CL:0001024;1.34e-23;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0001024,1.34e-23,1 | |||
|ontology_enrichment_development_v019=UBERON:0005425;4.59e-23;1!UBERON:0003056;1.35e-08;3 | |||
|ontology_enrichment_disease=DOID:8692!8.48e-12!31;DOID:2531!2.04e-10!51;DOID:0060083!2.04e-10!51;DOID:1240!3.93e-09!39;DOID:225!4.34e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:8692;9.71e-11;31!DOID:1240;1.17e-07;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,7.36e-12,31;DOID:1240,1.67e-09,39;DOID:2531,2.40e-07,51;DOID:0060083,2.40e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002371!1.01e-11!80;UBERON:0001474!1.01e-10!86;UBERON:0002193!2.75e-10!112;UBERON:0002390!4.44e-10!102;UBERON:0003061!4.44e-10!102;UBERON:0004765!9.54e-09!101;UBERON:0001434!9.54e-09!101;UBERON:0002405!1.42e-08!115;UBERON:0000941!9.71e-08!1;UBERON:0004904!9.71e-08!1;UBERON:0002464!9.71e-08!1;UBERON:0001021!9.71e-08!1;UBERON:0001785!9.71e-08!1;UBERON:0002372!4.90e-07!1;UBERON:0001961!4.90e-07!1;UBERON:0001744!4.90e-07!1;UBERON:0001735!4.90e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000941;4.59e-23;1!UBERON:0001785;4.59e-23;1!UBERON:0002464;4.59e-23;1!UBERON:0004904;4.59e-23;1!UBERON:0001021;4.59e-23;1!UBERON:0003714;3.06e-12;2!UBERON:0005162;3.06e-12;2!UBERON:0000122;3.06e-12;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000941,4.10e-23,1;UBERON:0001785,4.10e-23,1;UBERON:0002464,4.10e-23,1;UBERON:0004904,4.10e-23,1;UBERON:0001021,4.10e-23,1;UBERON:0003902,4.10e-23,1;UBERON:0005425,4.10e-23,1;UBERON:0003714,2.90e-12,2;UBERON:0005162,2.90e-12,2;UBERON:0000122,2.90e-12,2;UBERON:0001781,9.11e-07,4 | |||
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|short_description=p@chr9:100686938..100686967,+ | |||
}} | }} |
Latest revision as of 21:00, 31 July 2015
Short description: | p@chr9:100686938..100686967, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:100686938..100686967, + |
Coexpression cluster: | C553_acute_non_choriocarcinoma_endometrial_hepatoblastoma_signet_rhabdomyosarcoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD34-positive, CD38-negative hematopoietic stem cell | 1.34e-23 | 1 |
Ontology term | p-value | n |
---|---|---|
cranial nerve II | 4.10e-23 | 1 |
cranial nerve | 4.10e-23 | 1 |
nerve trunk | 4.10e-23 | 1 |
nerve connecting eye with brain | 4.10e-23 | 1 |
nerve | 4.10e-23 | 1 |
retinal neural layer | 4.10e-23 | 1 |
presumptive neural retina | 4.10e-23 | 1 |
neural tissue | 2.90e-12 | 2 |
multi cell component structure | 2.90e-12 | 2 |
neuron projection bundle | 2.90e-12 | 2 |
layer of retina | 9.11e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 7.36e-12 | 31 |
leukemia | 1.67e-09 | 39 |
hematologic cancer | 2.40e-07 | 51 |
immune system cancer | 2.40e-07 | 51 |