FFCP PHASE1:Hg19::chr9:107546269..107546275,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:107546269..107546275,- | |||
|coexpression_cluster_id=C1924 | |||
|description=CAGE_peak_at_chr9:107546269..107546275,- | |description=CAGE_peak_at_chr9:107546269..107546275,- | ||
|id=chr9:107546269..107546275,- | |id=chr9:107546269..107546275,- | ||
|ontology_enrichment_celltype=CL:0002057!1.25e-15!42;CL:0000766!2.12e-14!76;CL:0000557!2.40e-14!71;CL:0000839!3.34e-14!70;CL:0002194!4.11e-14!63;CL:0000576!4.11e-14!63;CL:0000040!4.11e-14!63;CL:0000559!4.11e-14!63;CL:0002009!1.24e-13!65;CL:0000860!1.60e-13!45 | |ontology_enrichment_celltype=CL:0002057!1.25e-15!42;CL:0000766!2.12e-14!76;CL:0000557!2.40e-14!71;CL:0000839!3.34e-14!70;CL:0002194!4.11e-14!63;CL:0000576!4.11e-14!63;CL:0000040!4.11e-14!63;CL:0000559!4.11e-14!63;CL:0002009!1.24e-13!65;CL:0000860!1.60e-13!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.69e-29;33!CL:0002057;2.69e-29;33!CL:0000473;1.55e-27;39!CL:0000234;1.55e-27;39!CL:0000576;2.41e-17;48!CL:0000766;1.98e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.25e-30,48;CL:0000234,4.25e-30,48;CL:0000860,5.79e-26,42;CL:0002057,5.79e-26,42;CL:0000766,7.64e-26,72;CL:0002194,8.67e-26,59;CL:0000576,8.67e-26,59;CL:0000040,8.67e-26,59;CL:0000559,8.67e-26,59;CL:0000839,1.73e-25,66;CL:0000557,7.09e-25,67;CL:0002009,1.84e-24,61;CL:0000763,1.05e-12,108;CL:0000049,1.05e-12,108;CL:0002031,4.48e-10,120;CL:0002087,3.75e-09,115;CL:0000738,6.03e-09,136;CL:0000136,2.83e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;7.27e-20;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.65e-13!167;UBERON:0002371!1.96e-12!80;UBERON:0001474!2.22e-11!86;UBERON:0002405!4.22e-11!115;UBERON:0000922!2.07e-09!612;UBERON:0000467!2.45e-09!625;UBERON:0000480!2.47e-09!626;UBERON:0000468!3.96e-09!659;UBERON:0000062!4.71e-09!511;UBERON:0000923!5.18e-09!604;UBERON:0005291!5.18e-09!604;UBERON:0006598!5.18e-09!604;UBERON:0002532!5.18e-09!604;UBERON:0004765!6.11e-09!101;UBERON:0001434!6.11e-09!101;UBERON:0002050!7.86e-09!605;UBERON:0005423!7.86e-09!605;UBERON:0000926!3.56e-07!448;UBERON:0004120!3.56e-07!448;UBERON:0006603!3.56e-07!448;UBERON:0002390!3.76e-07!102;UBERON:0003061!3.76e-07!102 | |||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.24e-08;19!UBERON:0006925;3.24e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.03e-21,76;UBERON:0001474,1.42e-18,82;UBERON:0002405,1.16e-15,93;UBERON:0004765,1.31e-15,90;UBERON:0002390,3.58e-13,98;UBERON:0003061,3.58e-13,98;UBERON:0001434,1.24e-12,100;UBERON:0002204,7.22e-12,167;UBERON:0002193,1.66e-11,108;UBERON:0003081,6.70e-09,203;UBERON:0002107,3.55e-08,19;UBERON:0006925,3.55e-08,19;UBERON:0008836,3.55e-08,19;UBERON:0000926,6.99e-07,315;UBERON:0004120,6.99e-07,315;UBERON:0006603,6.99e-07,315 | |||
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| ||
|short_description=p@chr9:107546269..107546275,- | |short_description=p@chr9:107546269..107546275,- | ||
}} | }} |
Latest revision as of 21:21, 31 July 2015
Short description: | p@chr9:107546269..107546275, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:107546269..107546275, - |
Coexpression cluster: | C1924_CD14_mature_Hepatocyte_Mast_salivary_Smooth_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.25e-30 | 48 |
phagocyte | 4.25e-30 | 48 |
classical monocyte | 5.79e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.79e-26 | 42 |
myeloid leukocyte | 7.64e-26 | 72 |
monopoietic cell | 8.67e-26 | 59 |
monocyte | 8.67e-26 | 59 |
monoblast | 8.67e-26 | 59 |
promonocyte | 8.67e-26 | 59 |
myeloid lineage restricted progenitor cell | 1.73e-25 | 66 |
granulocyte monocyte progenitor cell | 7.09e-25 | 67 |
macrophage dendritic cell progenitor | 1.84e-24 | 61 |
myeloid cell | 1.05e-12 | 108 |
common myeloid progenitor | 1.05e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 4.48e-10 | 120 |
nongranular leukocyte | 3.75e-09 | 115 |
leukocyte | 6.03e-09 | 136 |
fat cell | 2.83e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.03e-21 | 76 |
bone element | 1.42e-18 | 82 |
immune system | 1.16e-15 | 93 |
skeletal element | 1.31e-15 | 90 |
hematopoietic system | 3.58e-13 | 98 |
blood island | 3.58e-13 | 98 |
skeletal system | 1.24e-12 | 100 |
musculoskeletal system | 7.22e-12 | 167 |
hemolymphoid system | 1.66e-11 | 108 |
lateral plate mesoderm | 6.70e-09 | 203 |
liver | 3.55e-08 | 19 |
digestive gland | 3.55e-08 | 19 |
liver bud | 3.55e-08 | 19 |
mesoderm | 6.99e-07 | 315 |
mesoderm-derived structure | 6.99e-07 | 315 |
presumptive mesoderm | 6.99e-07 | 315 |