FFCP PHASE1:Hg19::chr9:107546269..107546275,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:107546269..107546275,- | |||
|coexpression_cluster_id=C1924 | |||
|description=CAGE_peak_at_chr9:107546269..107546275,- | |description=CAGE_peak_at_chr9:107546269..107546275,- | ||
|id=chr9:107546269..107546275,- | |id=chr9:107546269..107546275,- | ||
|ontology_enrichment_celltype=CL:0002057!1.25e-15!42;CL:0000766!2.12e-14!76;CL:0000557!2.40e-14!71;CL:0000839!3.34e-14!70;CL:0002194!4.11e-14!63;CL:0000576!4.11e-14!63;CL:0000040!4.11e-14!63;CL:0000559!4.11e-14!63;CL:0002009!1.24e-13!65;CL:0000860!1.60e-13!45 | |ontology_enrichment_celltype=CL:0002057!1.25e-15!42;CL:0000766!2.12e-14!76;CL:0000557!2.40e-14!71;CL:0000839!3.34e-14!70;CL:0002194!4.11e-14!63;CL:0000576!4.11e-14!63;CL:0000040!4.11e-14!63;CL:0000559!4.11e-14!63;CL:0002009!1.24e-13!65;CL:0000860!1.60e-13!45 | ||
|ontology_enrichment_celltype_v019=CL:0000860;2.69e-29;33!CL:0002057;2.69e-29;33!CL:0000473;1.55e-27;39!CL:0000234;1.55e-27;39!CL:0000576;2.41e-17;48!CL:0000766;1.98e-13;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,4.25e-30,48;CL:0000234,4.25e-30,48;CL:0000860,5.79e-26,42;CL:0002057,5.79e-26,42;CL:0000766,7.64e-26,72;CL:0002194,8.67e-26,59;CL:0000576,8.67e-26,59;CL:0000040,8.67e-26,59;CL:0000559,8.67e-26,59;CL:0000839,1.73e-25,66;CL:0000557,7.09e-25,67;CL:0002009,1.84e-24,61;CL:0000763,1.05e-12,108;CL:0000049,1.05e-12,108;CL:0002031,4.48e-10,120;CL:0002087,3.75e-09,115;CL:0000738,6.03e-09,136;CL:0000136,2.83e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;7.27e-20;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!9.65e-13!167;UBERON:0002371!1.96e-12!80;UBERON:0001474!2.22e-11!86;UBERON:0002405!4.22e-11!115;UBERON:0000922!2.07e-09!612;UBERON:0000467!2.45e-09!625;UBERON:0000480!2.47e-09!626;UBERON:0000468!3.96e-09!659;UBERON:0000062!4.71e-09!511;UBERON:0000923!5.18e-09!604;UBERON:0005291!5.18e-09!604;UBERON:0006598!5.18e-09!604;UBERON:0002532!5.18e-09!604;UBERON:0004765!6.11e-09!101;UBERON:0001434!6.11e-09!101;UBERON:0002050!7.86e-09!605;UBERON:0005423!7.86e-09!605;UBERON:0000926!3.56e-07!448;UBERON:0004120!3.56e-07!448;UBERON:0006603!3.56e-07!448;UBERON:0002390!3.76e-07!102;UBERON:0003061!3.76e-07!102 | |ontology_enrichment_uberon=UBERON:0002204!9.65e-13!167;UBERON:0002371!1.96e-12!80;UBERON:0001474!2.22e-11!86;UBERON:0002405!4.22e-11!115;UBERON:0000922!2.07e-09!612;UBERON:0000467!2.45e-09!625;UBERON:0000480!2.47e-09!626;UBERON:0000468!3.96e-09!659;UBERON:0000062!4.71e-09!511;UBERON:0000923!5.18e-09!604;UBERON:0005291!5.18e-09!604;UBERON:0006598!5.18e-09!604;UBERON:0002532!5.18e-09!604;UBERON:0004765!6.11e-09!101;UBERON:0001434!6.11e-09!101;UBERON:0002050!7.86e-09!605;UBERON:0005423!7.86e-09!605;UBERON:0000926!3.56e-07!448;UBERON:0004120!3.56e-07!448;UBERON:0006603!3.56e-07!448;UBERON:0002390!3.76e-07!102;UBERON:0003061!3.76e-07!102 | ||
|ontology_enrichment_uberon_v019=UBERON:0002107;3.24e-08;19!UBERON:0006925;3.24e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.03e-21,76;UBERON:0001474,1.42e-18,82;UBERON:0002405,1.16e-15,93;UBERON:0004765,1.31e-15,90;UBERON:0002390,3.58e-13,98;UBERON:0003061,3.58e-13,98;UBERON:0001434,1.24e-12,100;UBERON:0002204,7.22e-12,167;UBERON:0002193,1.66e-11,108;UBERON:0003081,6.70e-09,203;UBERON:0002107,3.55e-08,19;UBERON:0006925,3.55e-08,19;UBERON:0008836,3.55e-08,19;UBERON:0000926,6.99e-07,315;UBERON:0004120,6.99e-07,315;UBERON:0006603,6.99e-07,315 | |||
|phase1_expression=0.908391896352783,2.35510576280081,0.986680828671798,1.0007329835313,1.34088328328186,1.74467704820074,0,1.26343974685366,1.30592814099919,0,0,0,0,0.37129905888014,0.331397375727916,2.01697543935533,3.01347264011988,0.730310090387373,5.36726078669558,0,0.204000691244253,0,0,0.410623275218653,0,0,0,0,0,0.767658796194425,1.23852898652861,0,0.30120591877825,0.369754010166788,0.542270404062111,0.426507697462265,0,0.553995408531877,2.80762226458198,1.95309783644267,5.82180233023803,1.94336199611388,2.83333124397605,2.4717700592526,4.91238726795452,5.09426528494414,7.90258725479328,6.98985409637104,6.50383378879718,3.74000110018796,5.12321413058201,2.12834006899727,8.27389633767885,7.74581620300591,2.70852973188684,6.40023954444856,6.00393530127261,3.37085226667627,11.0190201253525,4.17207735198922,9.59005688698562,3.95821560224059,4.3882004676759,4.26224750532694,13.6398342155434,10.2129340444405,8.71951148593805,4.27122730936464,5.21482918420201,1.3031330682307,8.47559303686716,5.15588690382591,8.22802207346299,0.211255286311942,0.212604299965044,0.628975936525128,0,0,0.32145117339416,0,0,0.182664153764634,0,0,0,0.426730222566507,0,0,0,0,1.1384259382189,0,1.52909291250092,0,1.12101712596307,0.263384084775077,0.393419540227666,0.393010762749165,0,0,0,0.473447805734733,0,0,0,0,0,0.128091319725675,0,0,0,0,0,0.267540828089713,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0.670700859703636,1.15076305659177,0,1.00267582127178,0.289693037921647,0,0.486634870302636,0,0.221729397462564,0.263504357079378,0.261958150995425,0.364295288292542,0,0.324547393654683,0.522389211897802,0.398873881556595,0,0,0,0,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0.24406205754817,0,0,0.267899184852239,0,0,0,0,0,0,0,0,0,0.886413581652058,0.926864265692532,1.43418310374407,1.41867352879343,0,0,0.98667019366864,0,0.269421344139376,0.326923806226917,0.302714855289863,1.72852777344,0,0.624320153660641,0,0.149448680551801,0.117434498643765,0,0,0,0,0,2.37600571456411,1.97813543422845,0,0,0,0,0,0,0,0.901428353439581,0.226864366320042,0,0.427114777637135,0.211931901159562,0,0,0.515281080091258,0,0,0.584622030967192,0.757301322732344,0.276149695926898,0.161646056818812,0,0.403008392910561,0.169560592310488,2.89891279744945,1.36373060295417,1.14721838155602,0.609868530647977,0.397589304964456,0.116193942869518,0.207322110030741,0.504641701751257,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,10.1404027857465,12.7767538168091,8.86184860022106,0.441463099414651,0.737930631258681,0.343135620597051,0.329250856225877,0,0.100528972411631,0.555530670951178,0,1.03993478527958,0,0.231860809950154,1.05667824812239,0,0,0,0,0,4.18568910348575,0.234004265139238,3.12125440806329,0,0.671928512795438,0.425325291727159,0.179117045405697,0.581267877027924,0.766765358330422,0.492663237895943,0.528290604079356,1.03664057770386,2.59415916150531,3.53478813593864,0,0,0,0,0.102827492703324,0,0,0,1.30788020649984,0,0.904902010304444,0,0,0.531876233169741,0,0.257207374262142,0,0,1.00084595560703,0.542621605391443,0,0.977208552881205,1.42156779497018,0.791951872933429,1.80863626235752,0,0.799783929456456,2.43247561282381,2.51128545716063,4.21667878966063,0.718874566474748,0,0,0.289562613335158,0,0.179060963239896,0,0,0,0.128343036279748,0.76228387266739,0,0,0,0,1.49801404789436,2.99161459204025,0,0.24538298343828,0,0.271265023699736,0.831883446123229,0.178428988797162,0.315404830067869,0.35142424497814,0,0,0,0,0,0.434418072340414,0,0.343143423810856,0,0.431428401637234,0,0,1.66435439510497,0,0.496215615637554,0,0.561320188866147,0.384417447767103,1.53512174720011,0.160853921143607,1.48418066444991,0.925258162815933,1.06537035187876,0.739144404124282,3.63478100428535,2.32420756919918,0.241718899183244,2.40607764363942,0.184161977871793,0.68888668898764,0.728364672026868,0.917870904715969,0,0.462092022626489,0,0,0,0,0,0.863663664408557,0,0.270946437543853,0,0,0,0,0,0,0.512900250232778,0,0,1.854738209659,0.0915694648183434,0,0,0.650060246036521,0,0.290012154876366,0.308097234229289,0.921022048356777,0.275673144969061,0.322260734604821,0.435050081742686,0.255679882248303,0.267096106940212,1.32227932288782,1.34533047155574,0,1.0115778085555,0,4.40737285562896,2.7881490806424,0.616067160352178,0.532306030317022,0,0.9266210955196,0.715624433709956,0,0.632758849437452,1.14378116354295,0,0,0.95460974377781,0.78494864019923,0.359744915166629,0.274537029736055,0,0.606547444719948,0,3.79132610615083,0,5.60541026151954,0,0.545999645631943,1.97967604735198,1.13008116620243,0.551365343546124,1.99031692572366,1.75380354101505,1.15755106853338,0,0.608731130888112,1.239293992399,0.563391205064483,0.286822704408103,0.687743287091848,0.35667105148125,0.354761064070598,0.422215270595328,0.658589785919804,0,0,0.384888450902048,0,0,2.16530741786592,0.43050537267123,0,0.443430153536676,0.689170200620878,0,0,0,0.238231775457789,0.411362273086194,0,0.540031437238115,0,0.320472213382419,0,0,0,0.432807638929335,0,0,0,0,0.423347165447766,0,0.280797178113459,0,0,0,0,0.1605880751037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| ||
|short_description=p@chr9:107546269..107546275,- | |short_description=p@chr9:107546269..107546275,- | ||
}} | }} |
Latest revision as of 21:21, 31 July 2015
Short description: | p@chr9:107546269..107546275, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:107546269..107546275, - |
Coexpression cluster: | C1924_CD14_mature_Hepatocyte_Mast_salivary_Smooth_Monocytederived |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 4.25e-30 | 48 |
phagocyte | 4.25e-30 | 48 |
classical monocyte | 5.79e-26 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.79e-26 | 42 |
myeloid leukocyte | 7.64e-26 | 72 |
monopoietic cell | 8.67e-26 | 59 |
monocyte | 8.67e-26 | 59 |
monoblast | 8.67e-26 | 59 |
promonocyte | 8.67e-26 | 59 |
myeloid lineage restricted progenitor cell | 1.73e-25 | 66 |
granulocyte monocyte progenitor cell | 7.09e-25 | 67 |
macrophage dendritic cell progenitor | 1.84e-24 | 61 |
myeloid cell | 1.05e-12 | 108 |
common myeloid progenitor | 1.05e-12 | 108 |
hematopoietic lineage restricted progenitor cell | 4.48e-10 | 120 |
nongranular leukocyte | 3.75e-09 | 115 |
leukocyte | 6.03e-09 | 136 |
fat cell | 2.83e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.03e-21 | 76 |
bone element | 1.42e-18 | 82 |
immune system | 1.16e-15 | 93 |
skeletal element | 1.31e-15 | 90 |
hematopoietic system | 3.58e-13 | 98 |
blood island | 3.58e-13 | 98 |
skeletal system | 1.24e-12 | 100 |
musculoskeletal system | 7.22e-12 | 167 |
hemolymphoid system | 1.66e-11 | 108 |
lateral plate mesoderm | 6.70e-09 | 203 |
liver | 3.55e-08 | 19 |
digestive gland | 3.55e-08 | 19 |
liver bud | 3.55e-08 | 19 |
mesoderm | 6.99e-07 | 315 |
mesoderm-derived structure | 6.99e-07 | 315 |
presumptive mesoderm | 6.99e-07 | 315 |