FFCP PHASE1:Hg19::chr9:137266563..137266578,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr9:137266563..137266578,+
|short_description=p@chr9:137266563..137266578,+
|description=CAGE_peak_at_chr9:137266563..137266578,+
|association_with_transcript=...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:137266563..137266578,+ | |||
|coexpression_cluster_id=C3567 | |||
|description=CAGE_peak_at_chr9:137266563..137266578,+ | |||
|id=chr9:137266563..137266578,+ | |||
|ontology_enrichment_celltype=CL:0002194!1.40e-89!63;CL:0000576!1.40e-89!63;CL:0000040!1.40e-89!63;CL:0000559!1.40e-89!63;CL:0002009!2.33e-86!65;CL:0000839!4.21e-79!70;CL:0000557!8.99e-78!71;CL:0000766!1.12e-77!76;CL:0002057!1.59e-76!42;CL:0000860!1.50e-70!45;CL:0000763!1.29e-59!112;CL:0000049!1.29e-59!112;CL:0002087!6.02e-55!119;CL:0002031!2.45e-48!124;CL:0000738!1.05e-47!140;CL:0000988!2.09e-45!182;CL:0000037!3.08e-44!172;CL:0000566!3.08e-44!172;CL:0002032!8.57e-44!165;CL:0000837!8.57e-44!165;CL:0002393!2.60e-15!9;CL:0002397!2.60e-15!9;CL:0000134!1.02e-11!358;CL:0002320!3.65e-11!365;CL:0000219!3.16e-09!390;CL:0000875!3.39e-08!3;CL:0002396!3.39e-08!3;CL:0000080!3.82e-08!6;CL:0000048!2.13e-07!430;CL:0000723!4.50e-07!436 | |||
|ontology_enrichment_celltype_v019=CL:0000473;2.59e-79;39!CL:0000234;2.59e-79;39!CL:0000860;1.69e-77;33!CL:0002057;1.69e-77;33!CL:0000576;3.68e-61;48!CL:0000766;1.40e-43;69!CL:0000763;3.12e-21;100!CL:0000235;4.79e-17;6!CL:0000875;3.87e-14;3!CL:0002396;3.87e-14;3!CL:0000738;1.00e-13;136!CL:0002087;2.49e-13;104!CL:0000988;1.51e-08;177!CL:0000840;2.50e-07;5!CL:0002393;6.81e-07;6!CL:0002397;6.81e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,4.19e-120,59;CL:0000576,4.19e-120,59;CL:0000040,4.19e-120,59;CL:0000559,4.19e-120,59;CL:0000473,3.56e-117,48;CL:0000234,3.56e-117,48;CL:0002009,6.03e-116,61;CL:0000839,1.23e-106,66;CL:0000557,6.14e-105,67;CL:0000766,7.05e-102,72;CL:0000860,9.96e-101,42;CL:0002057,9.96e-101,42;CL:0000763,2.80e-65,108;CL:0000049,2.80e-65,108;CL:0002087,9.06e-61,115;CL:0002031,6.92e-58,120;CL:0000738,1.23e-52,136;CL:0002032,4.17e-43,161;CL:0000837,4.17e-43,161;CL:0000037,6.08e-41,168;CL:0000988,2.07e-38,177;CL:0000235,4.80e-17,6;CL:0002393,7.22e-17,9;CL:0002397,7.22e-17,9;CL:0000134,1.26e-14,354;CL:0000875,3.55e-14,3;CL:0002396,3.55e-14,3;CL:0002320,3.67e-14,361;CL:0000219,1.59e-12,386;CL:0000048,1.61e-10,427;CL:0000723,3.04e-10,433;CL:0000034,6.93e-10,441;CL:0000840,2.56e-07,5;CL:0001029,2.56e-07,5 | |||
|ontology_enrichment_development_v019=CL:0002057;2.52e-74;42!CL:0000049;2.21e-23;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.51e-89!102;UBERON:0003061!7.51e-89!102;UBERON:0002193!3.03e-79!112;UBERON:0002371!2.76e-67!80;UBERON:0001474!1.67e-61!86;UBERON:0004765!4.82e-50!101;UBERON:0001434!4.82e-50!101;UBERON:0002405!2.21e-49!115;UBERON:0003081!7.88e-37!216;UBERON:0002204!2.57e-26!167;UBERON:0000178!1.18e-20!15;UBERON:0000179!1.18e-20!15;UBERON:0000463!1.18e-20!15;UBERON:0000926!3.59e-12!448;UBERON:0004120!3.59e-12!448;UBERON:0006603!3.59e-12!448;UBERON:0002384!5.83e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.22e-91,76;UBERON:0001474,2.25e-84,82;UBERON:0002390,2.31e-84,98;UBERON:0003061,2.31e-84,98;UBERON:0004765,3.54e-76,90;UBERON:0002193,8.61e-76,108;UBERON:0002405,1.84e-73,93;UBERON:0001434,9.39e-68,100;UBERON:0002204,3.76e-37,167;UBERON:0003081,3.18e-36,203;UBERON:0000926,4.56e-20,315;UBERON:0004120,4.56e-20,315;UBERON:0006603,4.56e-20,315;UBERON:0002384,1.58e-13,371;UBERON:0000923,5.78e-07,560;UBERON:0010316,5.78e-07,560;UBERON:0005291,5.78e-07,560;UBERON:0006598,5.78e-07,560;UBERON:0010317,5.78e-07,560;UBERON:0002532,5.78e-07,560;UBERON:0002050,7.60e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0.928896739896456,0,0,0,0,0,0,0.553995408531877,0,0.651032612147555,0.223915474239924,0.647787332037959,0.257575567634187,5.96132778996215,4.1566353805769,3.88134497900506,3.71886459049095,2.87817521615278,2.78735733805593,1.43846196161075,2.56160706529101,1.41889337933151,1.03423704220986,0.645484683583826,4.06279459783025,4.89430082810772,4.09359225086769,3.14612878223118,3.97909060082173,2.56743221660875,2.55734850319616,4.94776950280074,2.99195486432448,3.83602275479425,1.16083695451434,0.56738522469114,0.622822248995575,1.7587406567972,1.0429658368404,1.52032191293582,0,1.10483290796269,0.632924774881769,3.59133986730301,2.12604299965044,3.14487968262564,2.47122988522289,0.901061357049038,1.12507910687956,6.84030584978997,5.9675003159727,4.38393969035121,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8418530857843,7.83583817846703,5.45127638127347,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,1.63802985597466,2.37809859661965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0.822724546172388,1.94541993357815,2.16012574895246,2.37937552888281,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0.456469358066384,0.626719583092093,0,0,0.321176150207399,0,0,0,1.53620382154229,0,1.00109485027145,0.781552381608161,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.741383633679017,0.730953646538188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.751871343838829,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18009283054671,0,0.928896739896456,0,0,0,0,0,0,0.553995408531877,0,0.651032612147555,0.223915474239924,0.647787332037959,0.257575567634187,5.96132778996215,4.1566353805769,3.88134497900506,3.71886459049095,2.87817521615278,2.78735733805593,1.43846196161075,2.56160706529101,1.41889337933151,1.03423704220986,0.645484683583826,4.06279459783025,4.89430082810772,4.09359225086769,3.14612878223118,3.97909060082173,2.56743221660875,2.55734850319616,4.94776950280074,2.99195486432448,3.83602275479425,1.16083695451434,0.56738522469114,0.622822248995575,1.7587406567972,1.0429658368404,1.52032191293582,0,1.10483290796269,0.632924774881769,3.59133986730301,2.12604299965044,3.14487968262564,2.47122988522289,0.901061357049038,1.12507910687956,6.84030584978997,5.9675003159727,4.38393969035121,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0.150575119077773,0,0,0.473554504088034,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.8418530857843,7.83583817846703,5.45127638127347,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47730203652438,1.63802985597466,2.37809859661965,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.29742683847143,0,2.10833939483032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.507447609232169,0,0.569647187174163,0.476463550915578,0.822724546172388,1.94541993357815,2.16012574895246,2.37937552888281,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0.456469358066384,0.626719583092093,0,0,0.321176150207399,0,0,0,1.53620382154229,0,1.00109485027145,0.781552381608161,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123084805461069,0,0,0,0,0,7.18449277040819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156980256395025,0,0,0,0,0,0,0,0,0,0,0,0,0,0.889563386041866,0.741383633679017,0.730953646538188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.05154941711726,0.558564802544508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0.13223260174269,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.751871343838829,0.45120521581504,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.186224142887574,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p@chr9:137266563..137266578,+ | |||
}} | }} |
Latest revision as of 00:03, 1 August 2015
Short description: | p@chr9:137266563..137266578, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:137266563..137266578, + |
Coexpression cluster: | C3567_CD14_Dendritic_CD14CD16_Monocytederived_Basophils_blood_Macrophage |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.22e-91 | 76 |
bone element | 2.25e-84 | 82 |
hematopoietic system | 2.31e-84 | 98 |
blood island | 2.31e-84 | 98 |
skeletal element | 3.54e-76 | 90 |
hemolymphoid system | 8.61e-76 | 108 |
immune system | 1.84e-73 | 93 |
skeletal system | 9.39e-68 | 100 |
musculoskeletal system | 3.76e-37 | 167 |
lateral plate mesoderm | 3.18e-36 | 203 |
mesoderm | 4.56e-20 | 315 |
mesoderm-derived structure | 4.56e-20 | 315 |
presumptive mesoderm | 4.56e-20 | 315 |
connective tissue | 1.58e-13 | 371 |
germ layer | 5.78e-07 | 560 |
germ layer / neural crest | 5.78e-07 | 560 |
embryonic tissue | 5.78e-07 | 560 |
presumptive structure | 5.78e-07 | 560 |
germ layer / neural crest derived structure | 5.78e-07 | 560 |
epiblast (generic) | 5.78e-07 | 560 |
embryonic structure | 7.60e-07 | 564 |