FFCP PHASE1:Hg19::chr9:37027617..37027635,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:37027617..37027635,- | |||
|coexpression_cluster_id=C857 | |coexpression_cluster_id=C857 | ||
|description=CAGE_peak_at_chr9:37027617..37027635,- | |description=CAGE_peak_at_chr9:37027617..37027635,- | ||
|id=chr9:37027617..37027635,- | |id=chr9:37027617..37027635,- | ||
|ontology_enrichment_celltype=CL:0000945!2.28e-41!24;CL:0000826!2.28e-41!24;CL:0000236!2.41e-27!14;CL:0000542!2.54e-22!53;CL:0000051!2.54e-22!53;CL:0000838!4.11e-21!52;CL:0002087!9.89e-11!119;CL:0000738!1.32e-09!140;CL:0002031!2.04e-08!124;CL:0000037!3.30e-08!172;CL:0000566!3.30e-08!172;CL:0002032!7.90e-08!165;CL:0000837!7.90e-08!165;CL:0000988!9.79e-08!182;CL:0000817!2.78e-07!3 | |ontology_enrichment_celltype=CL:0000945!2.28e-41!24;CL:0000826!2.28e-41!24;CL:0000236!2.41e-27!14;CL:0000542!2.54e-22!53;CL:0000051!2.54e-22!53;CL:0000838!4.11e-21!52;CL:0002087!9.89e-11!119;CL:0000738!1.32e-09!140;CL:0002031!2.04e-08!124;CL:0000037!3.30e-08!172;CL:0000566!3.30e-08!172;CL:0002032!7.90e-08!165;CL:0000837!7.90e-08!165;CL:0000988!9.79e-08!182;CL:0000817!2.78e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.60e-95;24!CL:0000236;9.01e-59;13!CL:0000542;7.57e-25;53!CL:0000123;2.11e-11;2!CL:0000242;2.11e-11;2!CL:0000817;4.58e-07;1!CL:0000785;6.25e-07;1!CL:0000819;6.25e-07;1!CL:0000946;7.81e-07;1!CL:0000786;7.81e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.16e-95,24;CL:0000826,1.16e-95,24;CL:0000236,5.64e-64,14;CL:0000838,1.26e-41,52;CL:0000542,9.45e-41,53;CL:0000051,9.45e-41,53;CL:0000817,1.85e-17,3;CL:0002087,4.66e-16,115;CL:0002031,3.35e-15,120;CL:0000738,6.97e-13,136;CL:0000785,4.19e-12,2;CL:0000955,4.19e-12,2;CL:0000818,4.19e-12,2;CL:0000954,4.19e-12,2;CL:0000816,4.19e-12,2;CL:0000242,1.31e-11,2;CL:0002032,2.32e-11,161;CL:0000837,2.32e-11,161;CL:0000037,1.08e-10,168;CL:0000988,6.55e-10,177;CL:0000819,5.75e-07,1;CL:0000946,8.49e-07,1;CL:0000786,8.49e-07,1;CL:0000980,8.49e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000051;7.57e-25;53!CL:0000954;4.19e-12;2!UBERON:0003056;1.05e-07;3!UBERON:0004872;3.55e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!4.63e-09!10 | |ontology_enrichment_disease=DOID:0060058!4.63e-09!10 | ||
|ontology_enrichment_disease_v019=DOID:0060058;2.26e-13;10!DOID:0060073;6.25e-07;1!DOID:8675;6.25e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060058,2.03e-13,10;DOID:0060073,5.75e-07,1;DOID:8675,5.75e-07,1;DOID:630,9.48e-07,1;DOID:0050177,9.48e-07,1;DOID:0050427,9.48e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0002106!9.99e-07!3;UBERON:0004854!9.99e-07!3;UBERON:0009034!9.99e-07!3;UBERON:0002095!9.99e-07!3;UBERON:0004782!9.99e-07!3;UBERON:0003281!9.99e-07!3;UBERON:0009664!9.99e-07!3;UBERON:0002296!9.99e-07!3;UBERON:0005602!9.99e-07!3;UBERON:0001179!9.99e-07!3;UBERON:0006293!9.99e-07!3 | |ontology_enrichment_uberon=UBERON:0002106!9.99e-07!3;UBERON:0004854!9.99e-07!3;UBERON:0009034!9.99e-07!3;UBERON:0002095!9.99e-07!3;UBERON:0004782!9.99e-07!3;UBERON:0003281!9.99e-07!3;UBERON:0009664!9.99e-07!3;UBERON:0002296!9.99e-07!3;UBERON:0005602!9.99e-07!3;UBERON:0001179!9.99e-07!3;UBERON:0006293!9.99e-07!3 | ||
|ontology_enrichment_uberon_v019=UBERON:0002106;4.28e-16;3!UBERON:0004177;7.24e-10;5!UBERON:0005057;7.24e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,6.34e-16,3;UBERON:0004854,6.34e-16,3;UBERON:0009034,6.34e-16,3;UBERON:0002095,6.34e-16,3;UBERON:0004782,6.34e-16,3;UBERON:0003281,6.34e-16,3;UBERON:0009664,6.34e-16,3;UBERON:0002296,6.34e-16,3;UBERON:0005602,6.34e-16,3;UBERON:0001179,6.34e-16,3;UBERON:0006293,6.34e-16,3;UBERON:0004177,4.17e-07,7;UBERON:0005057,4.17e-07,7 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.132949635666,2.38091709404843,2.2826126580967,0,0,0.309632246632152,0,0,0,0.852139206383318,1.9903692548239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,5.27988733383968,4.36910889009705,0.889509253863555,2.56038133539904,3.60356388332411,4.02326707968138,1.32208974556972,3.81621501814146,5.12291672198504,5.28513470433845,4.20500550937752,0,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0.743212700502875,6.20357615798713,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0.333698283423817,0.19538809540204,0,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,1.10513566212459,0.251932747854276,0,2.46169610922139,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,2.41320361269025,0,0.520874984799877,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,4.37891494117598,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0,0,0,2.28617996577618,0.795229689809303,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.30755590285376,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,1.87333962322753,2.8984205722165,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0.622077260032973,0.383683113910955,2.26432103933032,0,1.09209638192014,0.169732529954025,0.212574920101683,0,0,0,18.2959248402908,1.60114149657094,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,3.11131766400604,0,0,0.131545547125698,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,1.73814972905999,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,1.63757624423474,0,0,0,0.659643100472575,0.452888530700021,0,0,1.88126918544609,0,0,0,0,0,0,1.12780701575824,1.28915775947154,2.29864658627337,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0.275684698604535,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27968900727716,0,0,0,0,0,0,0,0,0,0,0.402547587182052,2.56454793842586 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.132949635666,2.38091709404843,2.2826126580967,0,0,0.309632246632152,0,0,0,0.852139206383318,1.9903692548239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.290209238628584,0.56738522469114,0,0,0,0,0.605399502633369,0.368277635987565,0,0,0,0,0,0,0,0,0,0,5.27988733383968,4.36910889009705,0.889509253863555,2.56038133539904,3.60356388332411,4.02326707968138,1.32208974556972,3.81621501814146,5.12291672198504,5.28513470433845,4.20500550937752,0,0.560508562981536,0.263384084775077,0,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0.265059536642971,0,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0.215714200818617,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192190067365106,0,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0.648473311192717,0.540031437238115,0.79312517629427,0,0,0,0.743212700502875,6.20357615798713,0,0,0,0,0.211673582723883,0,0,0,0,0,0,0,0.201799707191048,0,0,0,0,0.333698283423817,0.19538809540204,0,1.23087398947712,0,0,0,0,0,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0,1.10513566212459,0.251932747854276,0,2.46169610922139,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,2.41320361269025,0,0.520874984799877,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,4.37891494117598,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0,0,0.0967563312890851,0,0,0.0969890164884194,0,0,0,0,0,0,0.0801588202515337,0,0,0,0,0.343189995723929,0,0,0,0,0,0,0,0,0,0,0,0.788662062837943,0,0,0,0,0,0.223171457441873,0.0671834724867263,0,0,0.0787831823072236,0,0,0,2.28617996577618,0.795229689809303,0,0,0.137539436597234,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.30755590285376,0,0,0,0,0,0,0,0,0,0,0,0.18628920882415,0,0,0,0,0,1.87333962322753,2.8984205722165,0,0,0,0,0,0,0,0,0,0,0,0.449803112163605,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.163565394255844,0,0,0,0.19998739585493,0,0,0,0,0,0.622077260032973,0.383683113910955,2.26432103933032,0,1.09209638192014,0.169732529954025,0.212574920101683,0,0,0,18.2959248402908,1.60114149657094,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0.546974809018219,0,0,0,0,0,0,0,0,0,3.11131766400604,0,0,0.131545547125698,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,1.73814972905999,0,0,0.801711364730253,0,0,0,0,0,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,0,1.63757624423474,0,0,0,0.659643100472575,0.452888530700021,0,0,1.88126918544609,0,0,0,0,0,0,1.12780701575824,1.28915775947154,2.29864658627337,0,0,0,0,0,0,0.157771562193185,0,0,0,0,0,0,0,0,0,0.305966489225945,0,0.275684698604535,0.50141507858475,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27968900727716,0,0,0,0,0,0,0,0,0,0,0.402547587182052,2.56454793842586 | ||
|short_description=p@chr9:37027617..37027635,- | |short_description=p@chr9:37027617..37027635,- | ||
}} | }} |
Latest revision as of 01:58, 1 August 2015
Short description: | p@chr9:37027617..37027635, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:37027617..37027635, - |
Coexpression cluster: | C857_non_lymphoma_CD19_acute_diffuse_Burkitt_B |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.16e-95 | 24 |
pro-B cell | 1.16e-95 | 24 |
B cell | 5.64e-64 | 14 |
lymphoid lineage restricted progenitor cell | 1.26e-41 | 52 |
lymphocyte | 9.45e-41 | 53 |
common lymphoid progenitor | 9.45e-41 | 53 |
precursor B cell | 1.85e-17 | 3 |
nongranular leukocyte | 4.66e-16 | 115 |
hematopoietic lineage restricted progenitor cell | 3.35e-15 | 120 |
leukocyte | 6.97e-13 | 136 |
mature B cell | 4.19e-12 | 2 |
pre-B-II cell | 4.19e-12 | 2 |
transitional stage B cell | 4.19e-12 | 2 |
small pre-B-II cell | 4.19e-12 | 2 |
immature B cell | 4.19e-12 | 2 |
Merkel cell | 1.31e-11 | 2 |
hematopoietic oligopotent progenitor cell | 2.32e-11 | 161 |
hematopoietic multipotent progenitor cell | 2.32e-11 | 161 |
hematopoietic stem cell | 1.08e-10 | 168 |
hematopoietic cell | 6.55e-10 | 177 |
B-1 B cell | 5.75e-07 | 1 |
antibody secreting cell | 8.49e-07 | 1 |
plasma cell | 8.49e-07 | 1 |
plasmablast | 8.49e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
spleen | 6.34e-16 | 3 |
gastrointestinal system mesentery | 6.34e-16 | 3 |
stomach region | 6.34e-16 | 3 |
mesentery | 6.34e-16 | 3 |
gastrointestinal system serosa | 6.34e-16 | 3 |
mesentery of stomach | 6.34e-16 | 3 |
gut mesentery | 6.34e-16 | 3 |
dorsal mesentery | 6.34e-16 | 3 |
dorsal mesogastrium | 6.34e-16 | 3 |
peritoneal cavity | 6.34e-16 | 3 |
spleen primordium | 6.34e-16 | 3 |
hemopoietic organ | 4.17e-07 | 7 |
immune organ | 4.17e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
lymphoma | 2.03e-13 | 10 |
lymphatic system cancer | 5.75e-07 | 1 |
lymphosarcoma | 5.75e-07 | 1 |
genetic disease | 9.48e-07 | 1 |
monogenic disease | 9.48e-07 | 1 |
xeroderma pigmentosum | 9.48e-07 | 1 |