FFCP PHASE1:Hg19::chr9:75784999..75785048,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:75784999..75785048,+ | |||
|coexpression_cluster_id=C827 | |||
|description=CAGE_peak_at_chr9:75784999..75785048,+ | |description=CAGE_peak_at_chr9:75784999..75785048,+ | ||
|id=chr9:75784999..75785048,+ | |id=chr9:75784999..75785048,+ | ||
|ontology_enrichment_celltype=CL:0002057!4.81e-18!42;CL:0000860!4.84e-18!45;CL:0000557!1.28e-14!71;CL:0002009!4.04e-14!65;CL:0002194!7.84e-14!63;CL:0000576!7.84e-14!63;CL:0000040!7.84e-14!63;CL:0000559!7.84e-14!63;CL:0000839!1.08e-13!70;CL:0000766!5.20e-13!76;CL:0000548!1.12e-10!679;CL:0000004!1.12e-10!679;CL:0000255!1.12e-10!679;CL:0000012!2.90e-10!682;CL:0000063!4.39e-09!578;CL:0000003!1.51e-08!722;CL:0000048!2.61e-08!430;CL:0000723!4.13e-08!436;CL:0000144!6.04e-08!625;CL:0002371!6.67e-08!591;CL:0000034!3.93e-07!444 | |ontology_enrichment_celltype=CL:0002057!4.81e-18!42;CL:0000860!4.84e-18!45;CL:0000557!1.28e-14!71;CL:0002009!4.04e-14!65;CL:0002194!7.84e-14!63;CL:0000576!7.84e-14!63;CL:0000040!7.84e-14!63;CL:0000559!7.84e-14!63;CL:0000839!1.08e-13!70;CL:0000766!5.20e-13!76;CL:0000548!1.12e-10!679;CL:0000004!1.12e-10!679;CL:0000255!1.12e-10!679;CL:0000012!2.90e-10!682;CL:0000063!4.39e-09!578;CL:0000003!1.51e-08!722;CL:0000048!2.61e-08!430;CL:0000723!4.13e-08!436;CL:0000144!6.04e-08!625;CL:0002371!6.67e-08!591;CL:0000034!3.93e-07!444 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.61e-23;33!CL:0002057;7.61e-23;33!CL:0000473;2.28e-18;39!CL:0000234;2.28e-18;39!CL:0000576;1.10e-10;48!CL:0000766;2.96e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,5.34e-20,42;CL:0002057,5.34e-20,42;CL:0000473,7.25e-20,48;CL:0000234,7.25e-20,48;CL:0000557,8.83e-17,67;CL:0000839,3.69e-16,66;CL:0000766,1.91e-15,72;CL:0002009,2.00e-15,61;CL:0002194,2.55e-15,59;CL:0000576,2.55e-15,59;CL:0000040,2.55e-15,59;CL:0000559,2.55e-15,59;CL:0000763,8.43e-08,108;CL:0000049,8.43e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;2.72e-15;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.89e-14!80;UBERON:0001474!5.64e-13!86;UBERON:0004765!2.22e-12!101;UBERON:0001434!2.22e-12!101;UBERON:0002204!5.58e-11!167;UBERON:0002390!1.18e-09!102;UBERON:0003061!1.18e-09!102;UBERON:0002193!2.76e-09!112;UBERON:0002384!7.16e-07!375 | |ontology_enrichment_uberon=UBERON:0002371!2.89e-14!80;UBERON:0001474!5.64e-13!86;UBERON:0004765!2.22e-12!101;UBERON:0001434!2.22e-12!101;UBERON:0002204!5.58e-11!167;UBERON:0002390!1.18e-09!102;UBERON:0003061!1.18e-09!102;UBERON:0002193!2.76e-09!112;UBERON:0002384!7.16e-07!375 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,4.34e-16,76;UBERON:0001474,4.92e-15,82;UBERON:0004765,1.02e-13,90;UBERON:0001434,2.02e-12,100;UBERON:0002405,3.19e-12,93;UBERON:0002390,1.03e-11,98;UBERON:0003061,1.03e-11,98;UBERON:0002193,5.43e-11,108;UBERON:0002204,1.43e-08,167;UBERON:0000926,5.24e-07,315;UBERON:0004120,5.24e-07,315;UBERON:0006603,5.24e-07,315 | |||
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|phase1_expression=2.54349730978779,2.35510576280081,2.11431606143957,4.00293193412522,1.78784437770915,2.61701557230111,0,0.631719873426831,0.522371256399677,0.245733936501509,0,0.218441372130172,0.527533956456907,0.495065411840187,0.994192127183747,3.36162573225888,2.41077811209591,2.19093027116212,0.487932798790507,0,0.408001382488506,0,1.43117993565528,1.36874425072884,0.753255837568817,0,0,0.157421562627358,0,0.383829398097213,2.78669021968937,2.75826367343678,0,0.369754010166788,0,0,0.293600439334847,1.10799081706375,1.00272223735071,3.47217393145363,0,0,0.257575567634187,11.6318591023652,3.77875943688809,4.85168122375632,10.2268776238501,2.46700732813095,5.57471467611186,14.6723120084297,6.14785695669842,4.02019790810595,18.6162667597774,5.80936215225443,6.77132432971709,14.8711448238658,6.27684145133045,6.74170453335254,25.7110469591558,3.53021929783703,10.8687311385837,7.25672860410775,5.38551875578406,6.39337125799041,16.2517173632007,2.8369261234557,3.11411124497787,20.8536392163097,12.5155900420848,7.38442071997397,10.2917915447673,2.94622108790052,6.96217252369946,0.422510572623884,0.425208599930087,0.628975936525128,0.561643155732475,2.25265339262259,0.803627933485401,0.855038231223746,0.19891667719909,0.730656615058536,0,0,0,0,0,0,0,0,0,0,0,0,0,0.526768169550154,1.180258620683,2.75107533924415,1.23360899399706,0,0,0,0,0.445641827540694,0.294605907474837,0,0,0,0.520237390239513,2.13769275984779,2.76350017785848,1.44901542867526,0.296573126324121,0,0,0.339928028092699,0,0.68725489096526,1.26509846009751,0.318565414324097,0.651083453856419,0.950452044448374,0.451725357233318,0.255973222308837,1.24930726552346,0.473554504088034,0,0.604820229674197,1.33720097891754,0.579297615531196,0,2.01210257911091,0.383587685530591,5.42158728576849,0.50133791063589,1.30361867064741,0,0,1.60709189178915,2.21729397462564,1.49319135678314,0.0654895377488563,0,1.11235332835329,0.649094787309367,1.0447784237956,2.92507513141503,0,0,0,0,0,0,0,0,0.275118041940067,0,1.03366703667732,1.42306505074684,0.33472061276467,0.805658634218294,0.760272105718513,0,1.10298924103761,0,1.16089646769304,0,0.450445921933289,0,0,0.549605231791222,0,0,0.436094052142534,4.47274756525787,2.5326102332916,2.78059279707759,1.72101972449288,2.12801029319014,1.12135520028461,0,0.74000264525148,0.622422070799533,0.134710672069688,0.980771418680752,0,0.576175924479999,0.234321431833797,0.624320153660641,0,2.54062756938062,0.587172493218824,0.809364721840658,0.702254033511242,1.63323337003915,0.737005903870608,0.103325781175765,0,0.741800787835671,0,0,0.841680569770331,0.250237039743928,0.277064115484183,0,1.22595118319608,0.150238058906597,0.680593098960126,3.94657198515496,1.2813443329114,0.423863802319124,1.80054657650641,0.412210116953756,4.89517026086695,0.558350568994769,3.71307930930786,0.68205903612839,7.57301322732343,0.920498986422993,0.323292113637624,2.4850671476163,0.403008392910561,0.847802961552438,3.28543450377605,2.72746120590835,0.860413786167011,0,0,0,0.310983165046111,0.252320850875628,0,0,1.92972281457866,0,1.39310378409594,2.88751792667834,0.591534000199219,0.505754070234305,0.482022059766964,0.441175890929576,0.217879444092406,0.237270619111097,0.674156540800822,0.98110732562673,0.38474715694639,0,0,0,0,0,0,0,0.441463099414651,0,1.3725424823882,1.53650399572076,0,1.3068766413512,0.833296006426766,0,0,4.3299402607582,0.927443239800615,0.352226082707465,1.15493158208859,0.925971025153221,2.47330397904978,0,0,0.492434012174795,1.63802985597466,0.445893486866185,0.93733833986777,1.17587489739202,1.27597587518148,1.34337784054272,0.581267877027924,0,0,1.58487181223807,6.01251535068239,8.50307725160072,3.91351543621778,0,0,0,0,0.308482478109971,1.20137223137567,0.571652865261156,0.112131084345361,0,0.4400297149257,0.904902010304444,0,1.690605505112,0.531876233169741,1.04007436911366,0,0,0.532844358032199,0.285955987316295,0.542621605391443,0,0.325736184293735,0.355391948742546,1.58390374586686,1.50719688529793,0.871533458600294,1.89948683245908,1.2162378064119,1.00451418286425,6.32501818449095,1.19812427745791,0,2.85273810081437,3.18518874668674,2.4657158706046,0.895304816199478,0,0.591092280605782,1.2937654491571,1.02674429023799,0.254094624222463,0,0.773288812777695,0.167516265334349,3.82763250991898,0,5.9832291840805,0.414415513436035,0.858840442033979,1.00034104211935,0,5.40724239980099,5.53129865271201,3.31175071571263,3.98280810975225,0.300946099727719,0,1.03473071292505,1.32845119707087,0.184369168541703,1.82455590382974,0,0,1.24060815673732,1.94142780736755,0.853820462427555,0.303127571446259,1.66435439510497,0.30239029332968,2.72918588600655,1.68808170616869,1.68396056659844,2.05022638809122,0.511707249066704,1.28683136914886,1.48418066444991,1.3878872442239,0.887808626565635,1.56041596426237,0,1.85936605535935,0.120859449591622,2.40607764363942,4.51196845785892,0.803701137152247,1.0925470080403,1.04899531967539,0,0.308061348417659,0.784349769176855,0,0.316654886678627,0,0.510281115829547,3.02282282542995,0,0.2709464375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| ||
|short_description=p@chr9:75784999..75785048,+ | |short_description=p@chr9:75784999..75785048,+ | ||
}} | }} |
Latest revision as of 02:42, 1 August 2015
Short description: | p@chr9:75784999..75785048, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:75784999..75785048, + |
Coexpression cluster: | C827_CD14_throat_tongue_chorionic_esophagus_endometrioid_Olfactory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 5.34e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.34e-20 | 42 |
defensive cell | 7.25e-20 | 48 |
phagocyte | 7.25e-20 | 48 |
granulocyte monocyte progenitor cell | 8.83e-17 | 67 |
myeloid lineage restricted progenitor cell | 3.69e-16 | 66 |
myeloid leukocyte | 1.91e-15 | 72 |
macrophage dendritic cell progenitor | 2.00e-15 | 61 |
monopoietic cell | 2.55e-15 | 59 |
monocyte | 2.55e-15 | 59 |
monoblast | 2.55e-15 | 59 |
promonocyte | 2.55e-15 | 59 |
myeloid cell | 8.43e-08 | 108 |
common myeloid progenitor | 8.43e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 4.34e-16 | 76 |
bone element | 4.92e-15 | 82 |
skeletal element | 1.02e-13 | 90 |
skeletal system | 2.02e-12 | 100 |
immune system | 3.19e-12 | 93 |
hematopoietic system | 1.03e-11 | 98 |
blood island | 1.03e-11 | 98 |
hemolymphoid system | 5.43e-11 | 108 |
musculoskeletal system | 1.43e-08 | 167 |
mesoderm | 5.24e-07 | 315 |
mesoderm-derived structure | 5.24e-07 | 315 |
presumptive mesoderm | 5.24e-07 | 315 |