FFCP PHASE1:Hg19::chrX:148568487..148568517,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chrX:148568487..148568517,- | |||
|coexpression_cluster_id=C317 | |coexpression_cluster_id=C317 | ||
|description=CAGE_peak_at_chrX:148568487..148568517,- | |description=CAGE_peak_at_chrX:148568487..148568517,- | ||
|id=chrX:148568487..148568517,- | |id=chrX:148568487..148568517,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000775;4.87e-11;3!CL:0000047;2.68e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000775,3.94e-11,3 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002780!1.05e-12!41;UBERON:0001890!1.05e-12!41;UBERON:0006240!1.05e-12!41;UBERON:0002020!2.99e-12!34;UBERON:0003528!2.99e-12!34;UBERON:0001893!3.98e-12!34;UBERON:0001017!4.32e-12!82;UBERON:0003080!4.84e-12!42;UBERON:0001049!5.29e-12!57;UBERON:0005068!5.29e-12!57;UBERON:0006241!5.29e-12!57;UBERON:0007135!5.29e-12!57;UBERON:0001869!5.45e-12!32;UBERON:0002791!1.46e-11!33;UBERON:0007023!2.78e-11!115;UBERON:0005743!1.58e-10!86;UBERON:0002616!2.17e-10!59;UBERON:0002619!3.71e-10!22;UBERON:0000955!6.98e-10!69;UBERON:0006238!6.98e-10!69;UBERON:0000956!4.67e-09!25;UBERON:0000203!4.67e-09!25;UBERON:0000073!4.84e-09!94;UBERON:0001016!4.84e-09!94;UBERON:0001950!9.73e-09!20 | |ontology_enrichment_uberon=UBERON:0002780!1.05e-12!41;UBERON:0001890!1.05e-12!41;UBERON:0006240!1.05e-12!41;UBERON:0002020!2.99e-12!34;UBERON:0003528!2.99e-12!34;UBERON:0001893!3.98e-12!34;UBERON:0001017!4.32e-12!82;UBERON:0003080!4.84e-12!42;UBERON:0001049!5.29e-12!57;UBERON:0005068!5.29e-12!57;UBERON:0006241!5.29e-12!57;UBERON:0007135!5.29e-12!57;UBERON:0001869!5.45e-12!32;UBERON:0002791!1.46e-11!33;UBERON:0007023!2.78e-11!115;UBERON:0005743!1.58e-10!86;UBERON:0002616!2.17e-10!59;UBERON:0002619!3.71e-10!22;UBERON:0000955!6.98e-10!69;UBERON:0006238!6.98e-10!69;UBERON:0000956!4.67e-09!25;UBERON:0000203!4.67e-09!25;UBERON:0000073!4.84e-09!94;UBERON:0001016!4.84e-09!94;UBERON:0001950!9.73e-09!20 | ||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.14e-12;32!UBERON:0002791;5.07e-11;32!UBERON:0001893;6.00e-11;34!UBERON:0002619;1.04e-09;22!UBERON:0002780;2.03e-09;41!UBERON:0001890;2.03e-09;41!UBERON:0003528;4.49e-09;34!UBERON:0002020;4.49e-09;34!UBERON:0000200;1.82e-08;6!UBERON:0000956;2.20e-08;25!UBERON:0000203;2.20e-08;25!UBERON:0001954;5.62e-08;2!UBERON:0003022;5.62e-08;2!UBERON:0002421;5.62e-08;2!UBERON:0002600;5.62e-08;2!UBERON:0002702;6.84e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001869,2.83e-13,32;UBERON:0002780,3.03e-13,41;UBERON:0001890,3.03e-13,41;UBERON:0003080,3.03e-13,41;UBERON:0006240,3.03e-13,41;UBERON:0001893,2.43e-12,34;UBERON:0002791,2.43e-11,32;UBERON:0001017,2.51e-11,81;UBERON:0000073,5.87e-11,53;UBERON:0002616,5.87e-11,53;UBERON:0003528,1.55e-10,34;UBERON:0002020,1.55e-10,34;UBERON:0001049,3.52e-10,56;UBERON:0005068,3.52e-10,56;UBERON:0006241,3.52e-10,56;UBERON:0007135,3.52e-10,56;UBERON:0000955,4.85e-10,68;UBERON:0006238,4.85e-10,68;UBERON:0002619,9.68e-10,22;UBERON:0001016,1.03e-09,89;UBERON:0003056,5.61e-09,61;UBERON:0000200,1.92e-08,6;UBERON:0000956,2.06e-08,25;UBERON:0000203,2.06e-08,25;UBERON:0001954,6.06e-08,2;UBERON:0003022,6.06e-08,2;UBERON:0002421,6.06e-08,2;UBERON:0002600,6.06e-08,2;UBERON:0003075,1.28e-07,82;UBERON:0007284,1.28e-07,82;UBERON:0002346,4.38e-07,86;UBERON:0002702,4.65e-07,2;UBERON:0007023,7.18e-07,114 | |||
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| ||
|short_description=p@chrX:148568487..148568517,- | |short_description=p@chrX:148568487..148568517,- | ||
}} | }} |
Latest revision as of 06:34, 1 August 2015
Short description: | p@chrX:148568487..148568517, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:148568487..148568517, - |
Coexpression cluster: | C317_Neutrophils_medial_amygdala_occipital_hippocampus_brain_parietal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 3.94e-11 | 3 |
Ontology term | p-value | n |
---|---|---|
cerebral hemisphere | 2.83e-13 | 32 |
regional part of forebrain | 3.03e-13 | 41 |
forebrain | 3.03e-13 | 41 |
anterior neural tube | 3.03e-13 | 41 |
future forebrain | 3.03e-13 | 41 |
telencephalon | 2.43e-12 | 34 |
regional part of telencephalon | 2.43e-11 | 32 |
central nervous system | 2.51e-11 | 81 |
regional part of nervous system | 5.87e-11 | 53 |
regional part of brain | 5.87e-11 | 53 |
brain grey matter | 1.55e-10 | 34 |
gray matter | 1.55e-10 | 34 |
neural tube | 3.52e-10 | 56 |
neural rod | 3.52e-10 | 56 |
future spinal cord | 3.52e-10 | 56 |
neural keel | 3.52e-10 | 56 |
brain | 4.85e-10 | 68 |
future brain | 4.85e-10 | 68 |
regional part of cerebral cortex | 9.68e-10 | 22 |
nervous system | 1.03e-09 | 89 |
pre-chordal neural plate | 5.61e-09 | 61 |
gyrus | 1.92e-08 | 6 |
cerebral cortex | 2.06e-08 | 25 |
pallium | 2.06e-08 | 25 |
Ammon's horn | 6.06e-08 | 2 |
lobe parts of cerebral cortex | 6.06e-08 | 2 |
hippocampal formation | 6.06e-08 | 2 |
limbic lobe | 6.06e-08 | 2 |
neural plate | 1.28e-07 | 82 |
presumptive neural plate | 1.28e-07 | 82 |
neurectoderm | 4.38e-07 | 86 |
middle frontal gyrus | 4.65e-07 | 2 |
adult organism | 7.18e-07 | 114 |