FFCP PHASE1:Hg19::chrX:153667431..153667445,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chrX:153667431..153667445,+ | |||
|coexpression_cluster_id=C2957 | |||
|description=CAGE_peak_at_chrX:153667431..153667445,+ | |||
|id=chrX:153667431..153667445,+ | |||
|ontology_enrichment_celltype=CL:0000359!6.70e-07!32 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,6.32e-07,32 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.24e-17!57;UBERON:0005068!1.24e-17!57;UBERON:0006241!1.24e-17!57;UBERON:0007135!1.24e-17!57;UBERON:0001017!2.04e-16!82;UBERON:0005743!4.03e-16!86;UBERON:0002616!8.27e-15!59;UBERON:0002780!2.30e-14!41;UBERON:0001890!2.30e-14!41;UBERON:0006240!2.30e-14!41;UBERON:0003080!2.42e-14!42;UBERON:0002020!5.79e-14!34;UBERON:0003528!5.79e-14!34;UBERON:0001893!7.02e-14!34;UBERON:0002791!1.52e-13!33;UBERON:0000955!2.14e-13!69;UBERON:0006238!2.14e-13!69;UBERON:0001869!2.31e-13!32;UBERON:0000073!2.91e-13!94;UBERON:0001016!2.91e-13!94;UBERON:0002346!1.13e-12!90;UBERON:0003075!1.86e-12!86;UBERON:0007284!1.86e-12!86;UBERON:0000956!2.13e-11!25;UBERON:0000203!2.13e-11!25;UBERON:0003056!2.36e-11!61;UBERON:0002619!9.57e-11!22;UBERON:0001950!8.19e-10!20;UBERON:0000033!6.21e-09!123;UBERON:0000153!1.43e-08!129;UBERON:0007811!1.43e-08!129;UBERON:0000924!6.08e-08!173;UBERON:0006601!6.08e-08!173;UBERON:0000025!6.15e-08!194;UBERON:0004121!1.12e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0002791;1.00e-14;32!UBERON:0001869;1.41e-14;32!UBERON:0001893;1.59e-14;34!UBERON:0003528;2.20e-14;34!UBERON:0002020;2.20e-14;34!UBERON:0000956;1.22e-13;25!UBERON:0000203;1.22e-13;25!UBERON:0002619;7.14e-13;22!UBERON:0002780;2.72e-12;41!UBERON:0001890;2.72e-12;41!UBERON:0001950;8.80e-12;20!UBERON:0000073;1.55e-11;53!UBERON:0002616;1.55e-11;53!UBERON:0000955;1.41e-07;68!UBERON:0001017;8.72e-07;75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.40e-19,56;UBERON:0005068,3.40e-19,56;UBERON:0006241,3.40e-19,56;UBERON:0007135,3.40e-19,56;UBERON:0000073,1.19e-18,53;UBERON:0002616,1.19e-18,53;UBERON:0001017,1.36e-16,81;UBERON:0003528,3.10e-16,34;UBERON:0002020,3.10e-16,34;UBERON:0001893,3.89e-16,34;UBERON:0002780,5.24e-16,41;UBERON:0001890,5.24e-16,41;UBERON:0003080,5.24e-16,41;UBERON:0006240,5.24e-16,41;UBERON:0002791,9.90e-16,32;UBERON:0001869,1.54e-15,32;UBERON:0002346,5.80e-14,86;UBERON:0003075,6.81e-14,82;UBERON:0007284,6.81e-14,82;UBERON:0000955,9.32e-14,68;UBERON:0006238,9.32e-14,68;UBERON:0000956,1.86e-13,25;UBERON:0000203,1.86e-13,25;UBERON:0001016,2.93e-13,89;UBERON:0002619,1.03e-12,22;UBERON:0010371,3.72e-12,104;UBERON:0003056,1.06e-11,61;UBERON:0001950,1.25e-11,20;UBERON:0010314,5.66e-10,132;UBERON:0000025,4.74e-09,192;UBERON:0004121,1.81e-08,171;UBERON:0000924,1.81e-08,171;UBERON:0006601,1.81e-08,171 | |||
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| |||
|short_description=p@chrX:153667431..153667445,+ | |||
}} |
Latest revision as of 07:04, 1 August 2015
Short description: | p@chrX:153667431..153667445, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chrX:153667431..153667445, + |
Coexpression cluster: | C2957_medial_occipital_Neurons_amygdala_brain_duodenum_temporal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 6.32e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
neural tube | 3.40e-19 | 56 |
neural rod | 3.40e-19 | 56 |
future spinal cord | 3.40e-19 | 56 |
neural keel | 3.40e-19 | 56 |
regional part of nervous system | 1.19e-18 | 53 |
regional part of brain | 1.19e-18 | 53 |
central nervous system | 1.36e-16 | 81 |
brain grey matter | 3.10e-16 | 34 |
gray matter | 3.10e-16 | 34 |
telencephalon | 3.89e-16 | 34 |
regional part of forebrain | 5.24e-16 | 41 |
forebrain | 5.24e-16 | 41 |
anterior neural tube | 5.24e-16 | 41 |
future forebrain | 5.24e-16 | 41 |
regional part of telencephalon | 9.90e-16 | 32 |
cerebral hemisphere | 1.54e-15 | 32 |
neurectoderm | 5.80e-14 | 86 |
neural plate | 6.81e-14 | 82 |
presumptive neural plate | 6.81e-14 | 82 |
brain | 9.32e-14 | 68 |
future brain | 9.32e-14 | 68 |
cerebral cortex | 1.86e-13 | 25 |
pallium | 1.86e-13 | 25 |
nervous system | 2.93e-13 | 89 |
regional part of cerebral cortex | 1.03e-12 | 22 |
ecto-epithelium | 3.72e-12 | 104 |
pre-chordal neural plate | 1.06e-11 | 61 |
neocortex | 1.25e-11 | 20 |
structure with developmental contribution from neural crest | 5.66e-10 | 132 |
tube | 4.74e-09 | 192 |
ectoderm-derived structure | 1.81e-08 | 171 |
ectoderm | 1.81e-08 | 171 |
presumptive ectoderm | 1.81e-08 | 171 |