FFCP PHASE1:Mm9::chr3:57305697..57305724,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 mm9::chr3:57305697..57305724,- to FFCP PHASE1:Mm9::chr3:57305697..57305724,-: NSchange) |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=263 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr3:57305697..57305724,- | |||
|description=CAGE_peak_at_chr3:57305697..57305724,- | |||
|id=chr3:57305697..57305724,- | |||
|ontology_enrichment_celltype=CL:0000107!5.72e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000217,6.53e-15,2;CL:0000328,6.53e-15,2;CL:0002573,6.53e-15,2;CL:0002376,6.53e-15,2;CL:0000218,6.53e-15,2;CL:0000692,6.53e-15,2;CL:0002377,6.53e-15,2;CL:0002375,6.53e-15,2;CL:0000680,8.12e-11,6;CL:0000187,8.12e-11,6;CL:0000056,8.12e-11,6;CL:0000192,2.68e-10,3;CL:0000359,2.68e-10,3;CL:0002539,2.68e-10,3;CL:0000514,2.68e-10,3;CL:0000215,2.97e-10,3;CL:0000222,2.37e-09,7;CL:0000107,1.87e-07,9;CL:0000355,2.18e-07,9;CL:0002321,4.50e-07,70;CL:0000333,8.50e-07,10;CL:0000095,8.50e-07,10;CL:0000243,8.50e-07,10;CL:0000123,8.50e-07,10;CL:0000125,8.50e-07,10;CL:0000030,8.50e-07,10;CL:0000339,8.50e-07,10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000010!1.24e-09!11;UBERON:0002410!5.72e-08!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000010,1.03e-15,11;UBERON:0001135,2.68e-10,3;UBERON:0004237,2.68e-10,3;UBERON:0004695,2.68e-10,3;UBERON:0002111,2.68e-10,3;UBERON:0004178,2.68e-10,3;UBERON:0000013,4.07e-10,3;UBERON:0000947,6.11e-08,4;UBERON:0001637,6.11e-08,4;UBERON:0004573,6.11e-08,4;UBERON:0003509,6.11e-08,4;UBERON:0004571,6.11e-08,4;UBERON:0010191,6.11e-08,4;UBERON:0004572,6.11e-08,4;UBERON:0002410,1.87e-07,9;UBERON:0001134,2.18e-07,9;UBERON:0002036,2.18e-07,9;UBERON:0002385,2.18e-07,9;UBERON:0000486,2.18e-07,9;UBERON:0007503,2.18e-07,9;UBERON:0001015,2.18e-07,9;UBERON:0002329,2.18e-07,9;UBERON:0003082,2.18e-07,9;UBERON:0003059,2.18e-07,9;UBERON:0007282,2.18e-07,9;UBERON:0004290,2.18e-07,9;UBERON:0009618,2.18e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,1.82478476195126,0.183546752161682,0,0.218025156380447,0.439372365468944,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0.514518872071894,0.573066879877513,1.03134418455488,0,0,0,0,0.889294796111139,0,0,0,0.599200221036809,0,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0.186399445825301,7.34544075331885,1.43585964202892,0,0,0.679971333707751,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0,0,0.445326417194474,0.173485326766136,0.304465478312141,0,0,0.705532242814229,0.125666591329675,0.988779870937496,0.722996784599558,0.884610551949874,0.485300549842228,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.136072998302656,0.12811372028485,0,0.258703370739016,0.215567992932842,0.567318240503458,0,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0.154267112887378,0,0,0.350296027101508,0.493679549740441,0,0.0810688095458557,0,0.439100230582101,1.07365135008297,0,0.102904612379284,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0,0.420814919341911,0.126473074248515,0,0.156998727841375,0.740382983530803,0,0.166845105716094,0,0,0,0,0,0,0.648540907100142,0,0,0.372140947668503,0,0.252578877947112,0,0,0.739012760666419,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.476087281772027,1.36593553500459,0.315270288212382,0.8858587585951,0.797273843287435,0,0.518054945597687,0.867894351489069,0,0,0,0,0,0,0.163934945376675,0.252470927204373,0.631016438832513,0.780877488593277,0.861693590931196,1.67278158566786,0.891194696329576,0.849229592366497,0.809621403349789,3.50707029493574,1.18586333383957,0,0.851640511249612,0.178065603667255,1.14020871547503,0.494910368917606,0,0,0,0.188605079755898,0,0,0,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0.704015124191131,0.63549621259146,0,0.16488625294148,2.09903754704677,0.542816324353403,0.477489376012546,0.656563598980245,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0.495920734352016,0,0.259229946583586,0,0.56369293868419,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.704143431874524,0.2604087696879,0.524296722128554,0,0,0,0.202725215290164,0.410843828659309,0.25984164595559,0,0.198681354781265,0,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0.680191150845634,0.443971906748129,0.0897138566094757,0.335769232728157,0.19318959403219,0.750729901804728,0.36630324853453,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0.407412341537585,0,0,0,0.818462086339379,0,0.385813221962283,0,0,0.214871054048298,0.765153328275374,0.441182838239031,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.51793635951155,1.82478476195126,0.183546752161682,0,0.218025156380447,0.439372365468944,0.194429899074283,0.419959264876088,1.43752564364972,0,0,0,0.514518872071894,0.573066879877513,1.03134418455488,0,0,0,0,0.889294796111139,0,0,0,0.599200221036809,0,0.103689612308478,0.135005938331691,0.210324961351382,0.571301968807607,0,0.122490799214954,0.191690942036473,0,0,0.127687338085188,0,0,0,0,0,0,0,0,0.142371680799103,0.186399445825301,7.34544075331885,1.43585964202892,0,0,0.679971333707751,0,0,0,0,0,0,0.35333957451034,0,0,0,0,0,0.253359865475099,0,0,0,0.445326417194474,0.173485326766136,0.304465478312141,0,0,0.705532242814229,0.125666591329675,0.988779870937496,0.722996784599558,0.884610551949874,0.485300549842228,0.220841518460394,0,0,0,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0,0,0.373220911830279,0,0,0.260240885925407,0,0.180062129805349,0.30140963567143,0.136072998302656,0.12811372028485,0,0.258703370739016,0.215567992932842,0.567318240503458,0,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0.199034266818493,0,0,0,0.207125772535502,0,0,0,0.393528463494808,0.154267112887378,0,0,0.350296027101508,0.493679549740441,0,0.0810688095458557,0,0.439100230582101,1.07365135008297,0,0.102904612379284,0,0,0,0.232236671860439,0,0.201683524623343,0,0,0.474529061544512,0,0.251335208800269,0,0,0,0,0,0.189667900953082,0,0,0,0,0.420814919341911,0.126473074248515,0,0.156998727841375,0.740382983530803,0,0.166845105716094,0,0,0,0,0,0,0.648540907100142,0,0,0.372140947668503,0,0.252578877947112,0,0,0.739012760666419,0.189491411770485,0,0,0.234690248288502,0.167506257441816,0.476087281772027,1.36593553500459,0.315270288212382,0.8858587585951,0.797273843287435,0,0.518054945597687,0.867894351489069,0,0,0,0,0,0,0.163934945376675,0.252470927204373,0.631016438832513,0.780877488593277,0.861693590931196,1.67278158566786,0.891194696329576,0.849229592366497,0.809621403349789,3.50707029493574,1.18586333383957,0,0.851640511249612,0.178065603667255,1.14020871547503,0.494910368917606,0,0,0,0.188605079755898,0,0,0,0.727067458955011,0.356497378384721,0.316036757935816,0,0,0,0.18006109403131,0.388076051348264,0,0.354680467284547,0.178368817602071,0.164549020602121,0,0.704015124191131,0.63549621259146,0,0.16488625294148,2.09903754704677,0.542816324353403,0.477489376012546,0.656563598980245,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0.209088296014469,0,0.269728692769641,0.495920734352016,0,0.259229946583586,0,0.56369293868419,0.149516546043979,0,0,0.129159823477731,0.168956125490778,0.704143431874524,0.2604087696879,0.524296722128554,0,0,0,0.202725215290164,0.410843828659309,0.25984164595559,0,0.198681354781265,0,0,0,0.15241361331,0.100826185136841,0.0974578807397524,0.0962118416403295,0.116876902181569,0.680191150845634,0.443971906748129,0.0897138566094757,0.335769232728157,0.19318959403219,0.750729901804728,0.36630324853453,0,0,0,0,0,0,0,0,0,0.45032120322422,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0.252697211763798,0.25347929989024,0,0,0.0640251524048693,0,0.476293691283074,0,0,0,0,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0.407412341537585,0,0,0,0.818462086339379,0,0.385813221962283,0,0,0.214871054048298,0.765153328275374,0.441182838239031,0.231867835620421 | ||
|short_description=p@chr3:57305697..57305724,- | |||
}} | }} |
Latest revision as of 21:28, 3 August 2015
Short description: | p@chr3:57305697..57305724, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr3:57305697..57305724, - |
Coexpression cluster: | MCL_coexpression_mm9:263 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
insulating cell | 6.53e-15 | 2 |
myelin accumulating cell | 6.53e-15 | 2 |
Schwann cell | 6.53e-15 | 2 |
non-myelinating Schwann cell | 6.53e-15 | 2 |
myelinating Schwann cell;;Schwann cell | 6.53e-15 | 2 |
terminal Schwann cell | 6.53e-15 | 2 |
immature Schwann cell | 6.53e-15 | 2 |
Schwann cell precursor | 6.53e-15 | 2 |
muscle precursor cell | 8.12e-11 | 6 |
muscle cell | 8.12e-11 | 6 |
myoblast | 8.12e-11 | 6 |
smooth muscle cell | 2.68e-10 | 3 |
vascular associated smooth muscle cell | 2.68e-10 | 3 |
aortic smooth muscle cell | 2.68e-10 | 3 |
smooth muscle myoblast | 2.68e-10 | 3 |
barrier cell | 2.97e-10 | 3 |
mesodermal cell | 2.37e-09 | 7 |
autonomic neuron | 1.87e-07 | 9 |
multi-potent skeletal muscle stem cell | 2.18e-07 | 9 |
embryonic cell | 4.50e-07 | 70 |
migratory neural crest cell | 8.50e-07 | 10 |
neuron associated cell | 8.50e-07 | 10 |
glial cell (sensu Vertebrata) | 8.50e-07 | 10 |
neuron associated cell (sensu Vertebrata) | 8.50e-07 | 10 |
glial cell | 8.50e-07 | 10 |
glioblast | 8.50e-07 | 10 |
glioblast (sensu Vertebrata) | 8.50e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
peripheral nervous system | 1.03e-15 | 11 |
smooth muscle tissue | 2.68e-10 | 3 |
blood vessel smooth muscle | 2.68e-10 | 3 |
arterial system smooth muscle | 2.68e-10 | 3 |
artery smooth muscle tissue | 2.68e-10 | 3 |
aorta smooth muscle tissue | 2.68e-10 | 3 |
sympathetic nervous system | 4.07e-10 | 3 |
aorta | 6.11e-08 | 4 |
artery | 6.11e-08 | 4 |
systemic artery | 6.11e-08 | 4 |
arterial blood vessel | 6.11e-08 | 4 |
systemic arterial system | 6.11e-08 | 4 |
aortic system | 6.11e-08 | 4 |
arterial system | 6.11e-08 | 4 |
autonomic nervous system | 1.87e-07 | 9 |
skeletal muscle tissue | 2.18e-07 | 9 |
striated muscle tissue | 2.18e-07 | 9 |
muscle tissue | 2.18e-07 | 9 |
multilaminar epithelium | 2.18e-07 | 9 |
epithelial vesicle | 2.18e-07 | 9 |
musculature | 2.18e-07 | 9 |
somite | 2.18e-07 | 9 |
myotome | 2.18e-07 | 9 |
presomitic mesoderm | 2.18e-07 | 9 |
presumptive segmental plate | 2.18e-07 | 9 |
dermomyotome | 2.18e-07 | 9 |
trunk paraxial mesoderm | 2.18e-07 | 9 |