FFCP PHASE1:Mm9::chr10:13779506..13779514,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=29|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:13779506..13779514,-|id=chr10:13779506..13779514,-|ontology_enrichment_celltype=CL:0000624!1.23e-53!8;CL:0000893!2.30e-52!6;CL:0002489!2.30e-52!6;CL:0000898!2.30e-52!6;CL:0000809!2.30e-52!6;CL:0000810!2.30e-52!6;CL:0000895!2.30e-52!6;CL:0000808!2.30e-52!6;CL:0000894!2.30e-52!6;CL:0000806!2.30e-52!6;CL:0000807!2.30e-52!6;CL:0000805!2.30e-52!6;CL:0002425!2.30e-52!6;CL:0002436!2.30e-52!6;CL:0002427!2.30e-52!6;CL:0002428!2.30e-52!6;CL:0002429!2.30e-52!6;CL:0002433!2.30e-52!6;CL:0002431!2.30e-52!6;CL:0002432!2.30e-52!6;CL:0000791!1.10e-47!9;CL:0000789!1.10e-47!9;CL:0002420!1.10e-47!9;CL:0002419!1.10e-47!9;CL:0000790!1.10e-47!9;CL:0000838!1.05e-46!12;CL:0000542!4.18e-43!13;CL:0000051!4.18e-43!13;CL:0000084!5.11e-39!11;CL:0000827!5.11e-39!11;CL:0000738!6.20e-33!17;CL:0002087!6.20e-33!17;CL:0002031!4.47e-28!25;CL:0000988!7.18e-22!32;CL:0002032!7.18e-22!32;CL:0000037!7.18e-22!32;CL:0000566!7.18e-22!32;CL:0000837!7.18e-22!32;CL:0002320!4.23e-15!46;CL:0000134!4.23e-15!46;CL:0000219!8.48e-13!54;CL:0000815!1.63e-10!1;CL:0000792!1.63e-10!1;CL:0000063!2.21e-10!66;CL:0000945!2.48e-10!1;CL:0000236!2.48e-10!1;CL:0000826!2.48e-10!1;CL:0000034!1.44e-08!97;CL:0000723!2.26e-07!91;CL:0000048!2.26e-07!91;CL:0000144!9.70e-07!121;CL:0000012!9.70e-07!121|ontology_enrichment_celltype_v019_2=CL:0000815,3.07e-86,1;CL:0000792,3.07e-86,1;CL:0000624,2.93e-12,8;CL:0000791,4.56e-11,9;CL:0000789,4.56e-11,9;CL:0002420,4.56e-11,9;CL:0002419,4.56e-11,9;CL:0000790,4.56e-11,9;CL:0000084,2.51e-09,11;CL:0000827,2.51e-09,11;CL:0000838,1.13e-08,12;CL:0000542,4.08e-08,13;CL:0000051,4.08e-08,13|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.23e-15!46;UBERON:0002370!1.07e-13!23;UBERON:0000974!1.07e-13!23;UBERON:0004807!1.07e-13!23;UBERON:0005058!1.07e-13!23;UBERON:0003351!1.07e-13!23;UBERON:0009113!1.07e-13!23;UBERON:0003295!1.07e-13!23;UBERON:0009722!1.07e-13!23;UBERON:0005562!1.07e-13!23;UBERON:0007690!1.07e-13!23;UBERON:0006562!4.00e-13!24;UBERON:0003408!4.00e-13!24;UBERON:0001557!4.00e-13!24;UBERON:0001042!4.00e-13!24;UBERON:0008814!4.00e-13!24;UBERON:0009145!4.00e-13!24;UBERON:0000072!1.18e-11!27;UBERON:0004177!7.61e-11!29;UBERON:0002390!2.87e-09!45;UBERON:0003061!2.87e-09!45;UBERON:0000063!5.81e-09!35;UBERON:0002193!1.14e-08!48;UBERON:0000065!1.26e-07!41;UBERON:0001004!1.94e-07!42|ontology_enrichment_uberon_v019_2=|phase1_expression=0,0,0,0,0,0,0,2.45334314538995,0.84473233291,0.70219357896598,0.513653904676515,0.159544317990673,0.171200729931206,0.174840804837995,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr10:13779506..13779514,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=29 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:13779506..13779514,- | |||
|description=CAGE_peak_at_chr10:13779506..13779514,- | |||
|id=chr10:13779506..13779514,- | |||
|ontology_enrichment_celltype=CL:0000624!1.23e-53!8;CL:0000893!2.30e-52!6;CL:0002489!2.30e-52!6;CL:0000898!2.30e-52!6;CL:0000809!2.30e-52!6;CL:0000810!2.30e-52!6;CL:0000895!2.30e-52!6;CL:0000808!2.30e-52!6;CL:0000894!2.30e-52!6;CL:0000806!2.30e-52!6;CL:0000807!2.30e-52!6;CL:0000805!2.30e-52!6;CL:0002425!2.30e-52!6;CL:0002436!2.30e-52!6;CL:0002427!2.30e-52!6;CL:0002428!2.30e-52!6;CL:0002429!2.30e-52!6;CL:0002433!2.30e-52!6;CL:0002431!2.30e-52!6;CL:0002432!2.30e-52!6;CL:0000791!1.10e-47!9;CL:0000789!1.10e-47!9;CL:0002420!1.10e-47!9;CL:0002419!1.10e-47!9;CL:0000790!1.10e-47!9;CL:0000838!1.05e-46!12;CL:0000542!4.18e-43!13;CL:0000051!4.18e-43!13;CL:0000084!5.11e-39!11;CL:0000827!5.11e-39!11;CL:0000738!6.20e-33!17;CL:0002087!6.20e-33!17;CL:0002031!4.47e-28!25;CL:0000988!7.18e-22!32;CL:0002032!7.18e-22!32;CL:0000037!7.18e-22!32;CL:0000566!7.18e-22!32;CL:0000837!7.18e-22!32;CL:0002320!4.23e-15!46;CL:0000134!4.23e-15!46;CL:0000219!8.48e-13!54;CL:0000815!1.63e-10!1;CL:0000792!1.63e-10!1;CL:0000063!2.21e-10!66;CL:0000945!2.48e-10!1;CL:0000236!2.48e-10!1;CL:0000826!2.48e-10!1;CL:0000034!1.44e-08!97;CL:0000723!2.26e-07!91;CL:0000048!2.26e-07!91;CL:0000144!9.70e-07!121;CL:0000012!9.70e-07!121 | |||
|ontology_enrichment_celltype_v019_2=CL:0000815,3.07e-86,1;CL:0000792,3.07e-86,1;CL:0000624,2.93e-12,8;CL:0000791,4.56e-11,9;CL:0000789,4.56e-11,9;CL:0002420,4.56e-11,9;CL:0002419,4.56e-11,9;CL:0000790,4.56e-11,9;CL:0000084,2.51e-09,11;CL:0000827,2.51e-09,11;CL:0000838,1.13e-08,12;CL:0000542,4.08e-08,13;CL:0000051,4.08e-08,13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.23e-15!46;UBERON:0002370!1.07e-13!23;UBERON:0000974!1.07e-13!23;UBERON:0004807!1.07e-13!23;UBERON:0005058!1.07e-13!23;UBERON:0003351!1.07e-13!23;UBERON:0009113!1.07e-13!23;UBERON:0003295!1.07e-13!23;UBERON:0009722!1.07e-13!23;UBERON:0005562!1.07e-13!23;UBERON:0007690!1.07e-13!23;UBERON:0006562!4.00e-13!24;UBERON:0003408!4.00e-13!24;UBERON:0001557!4.00e-13!24;UBERON:0001042!4.00e-13!24;UBERON:0008814!4.00e-13!24;UBERON:0009145!4.00e-13!24;UBERON:0000072!1.18e-11!27;UBERON:0004177!7.61e-11!29;UBERON:0002390!2.87e-09!45;UBERON:0003061!2.87e-09!45;UBERON:0000063!5.81e-09!35;UBERON:0002193!1.14e-08!48;UBERON:0000065!1.26e-07!41;UBERON:0001004!1.94e-07!42 | |||
|ontology_enrichment_uberon_v019_2= | |||
|phase1_expression=0,0,0,0,0,0,0,2.45334314538995,0.84473233291,0.70219357896598,0.513653904676515,0.159544317990673,0.171200729931206,0.174840804837995,0,0,0,0,0.137114433605739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.838913030288682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139951452323658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr10:13779506..13779514,- | |||
}} |
Latest revision as of 04:06, 4 August 2015
Short description: | p@chr10:13779506..13779514, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:13779506..13779514, - |
Coexpression cluster: | MCL_coexpression_mm9:29 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regulatory T cell | 3.07e-86 | 1 |
CD4-positive, CD25-positive, alpha-beta regulatory T cell | 3.07e-86 | 1 |
CD4-positive, alpha-beta T cell | 2.93e-12 | 8 |
mature alpha-beta T cell | 4.56e-11 | 9 |
alpha-beta T cell | 4.56e-11 | 9 |
immature T cell | 4.56e-11 | 9 |
mature T cell | 4.56e-11 | 9 |
immature alpha-beta T cell | 4.56e-11 | 9 |
T cell | 2.51e-09 | 11 |
pro-T cell | 2.51e-09 | 11 |
lymphoid lineage restricted progenitor cell | 1.13e-08 | 12 |
lymphocyte | 4.08e-08 | 13 |
common lymphoid progenitor | 4.08e-08 | 13 |