FFCP PHASE1:Mm9::chr10:77365173..77365206,-: Difference between revisions
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{{FFCP|EntrezGene=237387|HGNC=|MCL_coexpression_id=8|UniProt=P59034,Q543Z4|association_with_transcript=74bp_to_ENSMUST00000057608,NM_145152,uc007fwi.2_5end|description=CAGE_peak_2_at_Lrrc3_5end|id=chr10:77365173..77365206,-|ontology_enrichment_celltype=CL:0000540!4.87e-08!33;CL:0000047!4.87e-08!33;CL:0000031!4.87e-08!33;CL:0000404!4.87e-08!33|ontology_enrichment_celltype_v019_2=CL:0000540,1.89e-11,33;CL:0000047,1.89e-11,33;CL:0000031,1.89e-11,33;CL:0000404,1.89e-11,33;CL:0000117,2.10e-09,23;CL:0000337,2.10e-09,23;CL:0000393,9.74e-09,39;CL:0000211,9.74e-09,39;CL:0002319,2.22e-07,43;CL:0000221,4.40e-07,44;CL:0000133,4.40e-07,44|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!2.72e-15!22;UBERON:0007499!2.72e-15!22;UBERON:0006925!2.72e-15!22;UBERON:0009497!2.72e-15!22;UBERON:0000015!2.72e-15!22;UBERON:0002423!2.72e-15!22;UBERON:0006235!2.72e-15!22;UBERON:0008835!2.72e-15!22;UBERON:0003894!2.72e-15!22;UBERON:0004161!2.72e-15!22;UBERON:0008836!2.72e-15!22;UBERON:0009854!5.87e-14!23;UBERON:0009856!5.87e-14!23;UBERON:0002365!6.64e-14!25;UBERON:0002330!6.64e-14!25;UBERON:0005172!3.64e-09!49;UBERON:0005173!3.64e-09!49;UBERON:0002417!3.64e-09!49;UBERON:0000916!3.64e-09!49;UBERON:0001017!1.74e-07!73;UBERON:0005743!1.74e-07!73;UBERON:0004121!4.99e-07!102;UBERON:0000924!4.99e-07!102;UBERON:0006601!4.99e-07!102;UBERON:0000073!5.80e-07!75;UBERON:0001016!5.80e-07!75;UBERON:0002346!6.51e-07!71;UBERON:0003075!6.51e-07!71;UBERON:0007284!6.51e-07!71|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.42e-25,22;UBERON:0007499,2.42e-25,22;UBERON:0006925,2.42e-25,22;UBERON:0009497,2.42e-25,22;UBERON:0000015,2.42e-25,22;UBERON:0002423,2.42e-25,22;UBERON:0006235,2.42e-25,22;UBERON:0008835,2.42e-25,22;UBERON:0003894,2.42e-25,22;UBERON:0004161,2.42e-25,22;UBERON:0008836,2.42e-25,22;UBERON:0009854,6.69e-24,23;UBERON:0009856,6.69e-24,23;UBERON:0002365,2.28e-21,25;UBERON:0002330,2.28e-21,25;UBERON:0005172,6.73e-11,49;UBERON:0005173,6.73e-11,49;UBERON:0002417,6.73e-11,49;UBERON:0000916,6.73e-11,49;UBERON:0005256,1.43e-10,45;UBERON:0003914,4.73e-08,47;UBERON:0000025,6.65e-08,114;UBERON:0003104,2.80e-07,61;UBERON:0009142,2.80e-07,61;UBERON:0011216,3.97e-07,194;UBERON:0001017,8.82e-07,73|phase1_expression=0.160148847104794,0,0,0,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.425216450755349,0,0,0.47997726838022,0,0,0,0.215471232685889,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,1.71390590642282,2.65042249141936,0.122490799214954,0.191690942036473,0,3.30347642998166,1.78762273319263,1.68967186581868,1.31886287730194,1.9212405156506,1.56274011167028,1.11673199600552,1.68828783009504,1.06958773443767,3.53554302568401,2.13557521198654,1.3047961207771,0,0.151143120213571,0.579728977403356,4.30211938490693,4.0798280022465,14.0322829825832,13.6453047664011,10.3046184032387,4.35377702408431,0,0,0,0,0,0,0,0,0,0,5.59501010623394,0,0.742210695324124,1.04091196059682,0.913396434936424,0.922461989024234,0.60289056221049,1.76383060703557,0.502666365318702,0.988779870937496,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0.41889341362691,1.53274233125155,0,0,0,0.299581278809645,0.457500602818626,1.50785222535437,1.21677024134594,1.27857728665165,1.0389402227978,2.75810147215188,0.509196819251581,0.373220911830279,0,0.210441855886474,0.260240885925407,0,0.360124259610698,0.30140963567143,0.680364991513279,0.512454881139399,0.562210347358373,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0,0.146199987425332,0.219550115291051,0,1.05144974282064,0.823236899034275,0.660837565967596,0,0.426576501070468,0.928946687441754,0.257734922644187,0,0.22237804384487,0.570676878337677,0.474529061544512,0.823494773620054,1.25667604400135,0.795825888164603,0.58489226135736,0.898819408654221,0,0.796565093017469,0,0.571242563048644,1.1270773567308,0.407302655690628,0,0.49095073923223,0.569128834118316,0.590440591918409,0.784993639206874,1.23397163921801,16.8977997439675,2.50267658574141,1.57247196090562,1.79889689907883,5.68008339887808,8.68237775108701,7.38414970166117,10.3570609482292,11.8358715545776,16.1991233780968,18.6898668485561,20.4677521217677,16.5379966750717,19.4485736019276,14.7105879087968,16.8855232477179,0.184753190166605,0.37898282354097,0.651859905768103,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0.551873492609465,0.80275294993896,0.234423373184406,0,0,0.94652465824877,2.34263246577983,0.430846795465598,1.19484398976276,1.55959071857676,1.41538265394416,1.21443210502468,1.753535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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:237387 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P59034,uniprot:Q543Z4 | |||
|association_with_transcript=74bp_to_ENSMUST00000057608,NM_145152,uc007fwi.2_5end | |||
|cluster_id=chr10:77365173..77365206,- | |||
|description=CAGE_peak_2_at_Lrrc3_5end | |||
|id=chr10:77365173..77365206,- | |||
|ontology_enrichment_celltype=CL:0000540!4.87e-08!33;CL:0000047!4.87e-08!33;CL:0000031!4.87e-08!33;CL:0000404!4.87e-08!33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,1.89e-11,33;CL:0000047,1.89e-11,33;CL:0000031,1.89e-11,33;CL:0000404,1.89e-11,33;CL:0000117,2.10e-09,23;CL:0000337,2.10e-09,23;CL:0000393,9.74e-09,39;CL:0000211,9.74e-09,39;CL:0002319,2.22e-07,43;CL:0000221,4.40e-07,44;CL:0000133,4.40e-07,44 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!2.72e-15!22;UBERON:0007499!2.72e-15!22;UBERON:0006925!2.72e-15!22;UBERON:0009497!2.72e-15!22;UBERON:0000015!2.72e-15!22;UBERON:0002423!2.72e-15!22;UBERON:0006235!2.72e-15!22;UBERON:0008835!2.72e-15!22;UBERON:0003894!2.72e-15!22;UBERON:0004161!2.72e-15!22;UBERON:0008836!2.72e-15!22;UBERON:0009854!5.87e-14!23;UBERON:0009856!5.87e-14!23;UBERON:0002365!6.64e-14!25;UBERON:0002330!6.64e-14!25;UBERON:0005172!3.64e-09!49;UBERON:0005173!3.64e-09!49;UBERON:0002417!3.64e-09!49;UBERON:0000916!3.64e-09!49;UBERON:0001017!1.74e-07!73;UBERON:0005743!1.74e-07!73;UBERON:0004121!4.99e-07!102;UBERON:0000924!4.99e-07!102;UBERON:0006601!4.99e-07!102;UBERON:0000073!5.80e-07!75;UBERON:0001016!5.80e-07!75;UBERON:0002346!6.51e-07!71;UBERON:0003075!6.51e-07!71;UBERON:0007284!6.51e-07!71 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,2.42e-25,22;UBERON:0007499,2.42e-25,22;UBERON:0006925,2.42e-25,22;UBERON:0009497,2.42e-25,22;UBERON:0000015,2.42e-25,22;UBERON:0002423,2.42e-25,22;UBERON:0006235,2.42e-25,22;UBERON:0008835,2.42e-25,22;UBERON:0003894,2.42e-25,22;UBERON:0004161,2.42e-25,22;UBERON:0008836,2.42e-25,22;UBERON:0009854,6.69e-24,23;UBERON:0009856,6.69e-24,23;UBERON:0002365,2.28e-21,25;UBERON:0002330,2.28e-21,25;UBERON:0005172,6.73e-11,49;UBERON:0005173,6.73e-11,49;UBERON:0002417,6.73e-11,49;UBERON:0000916,6.73e-11,49;UBERON:0005256,1.43e-10,45;UBERON:0003914,4.73e-08,47;UBERON:0000025,6.65e-08,114;UBERON:0003104,2.80e-07,61;UBERON:0009142,2.80e-07,61;UBERON:0011216,3.97e-07,194;UBERON:0001017,8.82e-07,73 | |||
|phase1_expression=0.160148847104794,0,0,0,1.00179145989269,0,0.233612640595526,0,0,0,0,0,0,0,0,0,0,0,0,0.42438965179803,0.425216450755349,0,0,0.47997726838022,0,0,0,0.215471232685889,0,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.782391344348039,0.218025156380447,0,0.194429899074283,0.139986421625363,0,0,0,0,0,0,0,2.02316460859598,0.528990979272033,1.90149421051854,0,0,0,0,0,0,0,0.207379224616955,0.135005938331691,0.210324961351382,1.71390590642282,2.65042249141936,0.122490799214954,0.191690942036473,0,3.30347642998166,1.78762273319263,1.68967186581868,1.31886287730194,1.9212405156506,1.56274011167028,1.11673199600552,1.68828783009504,1.06958773443767,3.53554302568401,2.13557521198654,1.3047961207771,0,0.151143120213571,0.579728977403356,4.30211938490693,4.0798280022465,14.0322829825832,13.6453047664011,10.3046184032387,4.35377702408431,0,0,0,0,0,0,0,0,0,0,5.59501010623394,0,0.742210695324124,1.04091196059682,0.913396434936424,0.922461989024234,0.60289056221049,1.76383060703557,0.502666365318702,0.988779870937496,0.144599356919912,0,0.161766849947409,0,0.484875253135222,0,0,0.41889341362691,1.53274233125155,0,0,0,0.299581278809645,0.457500602818626,1.50785222535437,1.21677024134594,1.27857728665165,1.0389402227978,2.75810147215188,0.509196819251581,0.373220911830279,0,0.210441855886474,0.260240885925407,0,0.360124259610698,0.30140963567143,0.680364991513279,0.512454881139399,0.562210347358373,0.258703370739016,0.215567992932842,0.189106080167819,0.527853372491847,0.219195732427575,0.278047249225598,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0.180062061461015,0,0.196764231747404,0.154267112887378,0,0,0,0.16455984991348,0,0,0.146199987425332,0.219550115291051,0,1.05144974282064,0.823236899034275,0.660837565967596,0,0.426576501070468,0.928946687441754,0.257734922644187,0,0.22237804384487,0.570676878337677,0.474529061544512,0.823494773620054,1.25667604400135,0.795825888164603,0.58489226135736,0.898819408654221,0,0.796565093017469,0,0.571242563048644,1.1270773567308,0.407302655690628,0,0.49095073923223,0.569128834118316,0.590440591918409,0.784993639206874,1.23397163921801,16.8977997439675,2.50267658574141,1.57247196090562,1.79889689907883,5.68008339887808,8.68237775108701,7.38414970166117,10.3570609482292,11.8358715545776,16.1991233780968,18.6898668485561,20.4677521217677,16.5379966750717,19.4485736019276,14.7105879087968,16.8855232477179,0.184753190166605,0.37898282354097,0.651859905768103,0.169745085775188,0.234690248288502,0,0.238043640886014,0,0.157635144106191,0,0.159454768657487,0,0,0.144649058581512,0,0,0,0.551873492609465,0.80275294993896,0.234423373184406,0,0,0.94652465824877,2.34263246577983,0.430846795465598,1.19484398976276,1.55959071857676,1.41538265394416,1.21443210502468,1.75353514746787,0,0.642642632843614,0.425820255624806,0.534196811001766,0.162886959353576,0.164970122972535,0,0,0,0,0.295301892880773,0,0.258428293168221,0.363533729477506,0,0.632073515871632,0,0,0,0,0.388076051348264,0.428674070063185,0,0.713475270408282,0.493647061806363,0,0,0.63549621259146,0.661585194164886,0,0.161464426695906,0.180938774784468,0.358117032009409,0,0.582961673259701,0.370850604021019,0,0,0,0,0,0,0,0,0.138199973804424,0.954670618015114,0.474503990371703,0.609958401380546,0.648032044930808,0.209088296014469,1.09181281873089,0.674321731924103,2.64491058321075,1.30877970992015,1.03691978633434,0.621339313086926,0,0,0,0,0.258319646955462,0.168956125490778,0.234714477291508,0.5208175393758,0,0,0,0,0,0.205421914329655,0,0,0,0,0,0.201932899896295,0.15241361331,0.100826185136841,0,0,0.116876902181569,0,0.221985953374065,0.448569283047378,0.503653849092235,0.19318959403219,0,0.183151624267265,0,0,3.3885110557024,0.460325236507177,0.572895513439397,1.71853182343688,1.37016503954128,0.755393897389701,1.35004500046361,0,0.453142408984205,0.51776031175182,0.103787347584177,0.798049746802062,0.341467211508268,0.243106717068294,1.04806581313991,1.10306105070008,0.222246727801615,0.824140228955577,1.28367683836726,1.26348605881899,0.25347929989024,0.565879024158229,1.12369808963859,1.15245274328765,1.14870937911227,0,1.0429589335037,0.192909220463705,1.23625770240992,0.441596760403192,0.685738504770831,1.24233064311536,0.715308569841963,1.16277133305863,0.846984423737976,1.4384483341585,0.73171189149109,0.263069711437843,0.407412341537585,1.12228454331548,0.949080144993393,0.788035859004508,1.22769312950907,1.08455788830176,0.964533054905707,0.499621155875892,0.467863216890817,1.93383948643468,0.191288332068843,0,0.231867835620421 | |||
|short_description=p2@Lrrc3 | |||
}} |
Revision as of 18:01, 4 August 2015
Short description: | p2@Lrrc3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Lrrc3_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 74bp_to_ENSMUST00000057608, NM_145152, uc007fwi.2_5end |
EntrezGene: | 237387 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 1.89e-11 | 33 |
neuronal stem cell | 1.89e-11 | 33 |
neuroblast | 1.89e-11 | 33 |
electrically signaling cell | 1.89e-11 | 33 |
CNS neuron (sensu Vertebrata) | 2.10e-09 | 23 |
neuroblast (sensu Vertebrata) | 2.10e-09 | 23 |
electrically responsive cell | 9.74e-09 | 39 |
electrically active cell | 9.74e-09 | 39 |
neural cell | 2.22e-07 | 43 |
ectodermal cell | 4.40e-07 | 44 |
neurectodermal cell | 4.40e-07 | 44 |
Ontology term | p-value | n |
---|---|---|
liver | 2.42e-25 | 22 |
epithelial sac | 2.42e-25 | 22 |
digestive gland | 2.42e-25 | 22 |
epithelium of foregut-midgut junction | 2.42e-25 | 22 |
anatomical boundary | 2.42e-25 | 22 |
hepatobiliary system | 2.42e-25 | 22 |
foregut-midgut junction | 2.42e-25 | 22 |
hepatic diverticulum | 2.42e-25 | 22 |
liver primordium | 2.42e-25 | 22 |
septum transversum | 2.42e-25 | 22 |
liver bud | 2.42e-25 | 22 |
digestive tract diverticulum | 6.69e-24 | 23 |
sac | 6.69e-24 | 23 |
exocrine gland | 2.28e-21 | 25 |
exocrine system | 2.28e-21 | 25 |
abdomen element | 6.73e-11 | 49 |
abdominal segment element | 6.73e-11 | 49 |
abdominal segment of trunk | 6.73e-11 | 49 |
abdomen | 6.73e-11 | 49 |
trunk mesenchyme | 1.43e-10 | 45 |
epithelial tube | 4.73e-08 | 47 |
tube | 6.65e-08 | 114 |
mesenchyme | 2.80e-07 | 61 |
entire embryonic mesenchyme | 2.80e-07 | 61 |
organ system subdivision | 3.97e-07 | 194 |
central nervous system | 8.82e-07 | 73 |