FFCP PHASE1:Mm9::chr12:114659816..114659828,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2029 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:114659816..114659828,+ | |||
|description=CAGE_peak_at_chr12:114659816..114659828,+ | |description=CAGE_peak_at_chr12:114659816..114659828,+ | ||
|id=chr12:114659816..114659828,+ | |id=chr12:114659816..114659828,+ | ||
|ontology_enrichment_celltype=CL:0000553!8.01e-13!6;CL:0000556!8.01e-13!6;CL:0000050!3.32e-08!9;CL:0002027!4.01e-07!3;CL:0002006!4.01e-07!3;CL:0002024!4.01e-07!3 | |ontology_enrichment_celltype=CL:0000553!8.01e-13!6;CL:0000556!8.01e-13!6;CL:0000050!3.32e-08!9;CL:0002027!4.01e-07!3;CL:0002006!4.01e-07!3;CL:0002024!4.01e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000553,1.25e-33,6;CL:0000556,1.25e-33,6;CL:0000050,1.69e-22,9;CL:0000839,1.27e-15,13;CL:0000763,1.04e-12,16;CL:0002027,1.07e-11,3;CL:0002006,1.07e-11,3;CL:0002024,1.07e-11,3;CL:0002031,1.50e-11,25;CL:0000049,1.03e-10,19;CL:0000945,1.19e-09,1;CL:0000236,1.19e-09,1;CL:0000826,1.19e-09,1;CL:0000988,5.57e-09,32;CL:0002032,5.57e-09,32;CL:0000037,5.57e-09,32;CL:0000837,5.57e-09,32 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.38e-12!48;UBERON:0002390!9.99e-11!45;UBERON:0003061!9.99e-11!45;UBERON:0003081!3.17e-08!88;UBERON:0004177!1.13e-07!29;UBERON:0002405!5.83e-07!70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001962,2.95e-16,2;UBERON:0001961,2.95e-16,2;UBERON:0001744,2.95e-16,2;UBERON:0002193,6.68e-13,48;UBERON:0002405,6.68e-13,48;UBERON:0002371,1.04e-12,16;UBERON:0002465,3.60e-11,3;UBERON:0001474,2.95e-09,22;UBERON:0004765,2.95e-09,22;UBERON:0001434,2.95e-09,22;UBERON:0003199,5.27e-09,1;UBERON:0002390,1.83e-08,45;UBERON:0003061,1.83e-08,45 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.174840804837995,0.999329285446988,2.83465374345756,2.09868563438444,1.89277299214943,3.15363197293199,2.97072756258621,0,0.794327609607082,0.261199789138935,1.11994695955385,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02678254538567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0,0,0.884610551949874,0,0.662524555381181,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0,0,0.658650345873152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,5.80960994712699,0,0,0,0.27338845544205,1.83022538565218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.632022241256357,0,0,0.25984164595559,0,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.201652370273681,0.0974578807397524,0.769694733122636,0.350630706544707,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.174840804837995,0.999329285446988,2.83465374345756,2.09868563438444,1.89277299214943,3.15363197293199,2.97072756258621,0,0.794327609607082,0.261199789138935,1.11994695955385,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.02678254538567,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15279824777681,0,0,0,0.075726193333184,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0.125666591329675,0,0,0.884610551949874,0,0.662524555381181,0,0,0,0,0,0.239630249011841,0,0,0,0,0,0,0.255715457330331,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278047249225598,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32833492815819,0,0,0.658650345873152,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156998727841375,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.184753190166605,0,0,0,0,0,0,0,0,0,0,0.163863314715738,0.345369963731791,0.433947175744535,0,0,0,0.275936746304732,0,0,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0.141940085208269,0,0,0,1.32745138339963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.119372344003136,0,0,0.18542530201051,5.80960994712699,0,0,0,0.27338845544205,1.83022538565218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0,0,0,0,0,0.632022241256357,0,0,0.25984164595559,0,0,0,0.147689527174577,0.201932899896295,0.0762068066549998,0.201652370273681,0.0974578807397524,0.769694733122636,0.350630706544707,0,0,0,0,0.19318959403219,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr12:114659816..114659828,+ | |short_description=p@chr12:114659816..114659828,+ | ||
}} | }} |
Latest revision as of 19:46, 4 August 2015
Short description: | p@chr12:114659816..114659828, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:114659816..114659828, + |
Coexpression cluster: | MCL_coexpression_mm9:2029 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
megakaryocyte progenitor cell | 1.25e-33 | 6 |
megakaryocyte | 1.25e-33 | 6 |
megakaryocyte-erythroid progenitor cell | 1.69e-22 | 9 |
myeloid lineage restricted progenitor cell | 1.27e-15 | 13 |
myeloid cell | 1.04e-12 | 16 |
CD9-positive, CD41-positive megakaryocyte cell | 1.07e-11 | 3 |
Kit-positive, CD34-negative megakaryocyte erythroid progenitor cell | 1.07e-11 | 3 |
Kit-positive megakaryocyte progenitor cell | 1.07e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 1.50e-11 | 25 |
common myeloid progenitor | 1.03e-10 | 19 |
lymphocyte of B lineage | 1.19e-09 | 1 |
B cell | 1.19e-09 | 1 |
pro-B cell | 1.19e-09 | 1 |
hematopoietic cell | 5.57e-09 | 32 |
hematopoietic oligopotent progenitor cell | 5.57e-09 | 32 |
hematopoietic stem cell | 5.57e-09 | 32 |
hematopoietic multipotent progenitor cell | 5.57e-09 | 32 |
Ontology term | p-value | n |
---|---|---|
gut-associated lymphoid tissue | 2.95e-16 | 2 |
mucosa-associated lymphoid tissue | 2.95e-16 | 2 |
lymphoid tissue | 2.95e-16 | 2 |
hemolymphoid system | 6.68e-13 | 48 |
immune system | 6.68e-13 | 48 |
bone marrow | 1.04e-12 | 16 |
lymphoid system | 3.60e-11 | 3 |
bone element | 2.95e-09 | 22 |
skeletal element | 2.95e-09 | 22 |
skeletal system | 2.95e-09 | 22 |
egg chamber | 5.27e-09 | 1 |
hematopoietic system | 1.83e-08 | 45 |
blood island | 1.83e-08 | 45 |