FFCP PHASE1:Mm9::chr17:37191724..37191766,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=42|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:37191724..37191766,+|id=chr17:37191724..37191766,+|ontology_enrichment_celltype=CL:0000117!1.91e-15!23;CL:0000337!1.91e-15!23;CL:0000540!3.10e-10!33;CL:0000047!3.10e-10!33;CL:0000031!3.10e-10!33;CL:0000404!3.10e-10!33;CL:0002319!3.15e-08!43;CL:0000221!6.70e-08!44;CL:0000133!6.70e-08!44;CL:0000393!9.13e-08!39;CL:0000211!9.13e-08!39|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001049!1.80e-26!52;UBERON:0005068!1.80e-26!52;UBERON:0006241!1.80e-26!52;UBERON:0007135!1.80e-26!52;UBERON:0001017!3.08e-26!73;UBERON:0005743!3.08e-26!73;UBERON:0000073!3.86e-25!75;UBERON:0001016!3.86e-25!75;UBERON:0000955!1.71e-24!50;UBERON:0006238!1.71e-24!50;UBERON:0004121!1.70e-23!102;UBERON:0000924!1.70e-23!102;UBERON:0006601!1.70e-23!102;UBERON:0002616!2.14e-23!49;UBERON:0000033!4.55e-23!63;UBERON:0002346!5.20e-23!71;UBERON:0003075!5.20e-23!71;UBERON:0007284!5.20e-23!71;UBERON:0002020!2.10e-19!34;UBERON:0003080!2.35e-17!40;UBERON:0003056!4.68e-17!49;UBERON:0002780!9.96e-17!39;UBERON:0001890!9.96e-17!39;UBERON:0006240!9.96e-17!39;UBERON:0007811!2.88e-16!86;UBERON:0000153!1.06e-14!94;UBERON:0002791!3.21e-14!29;UBERON:0003528!3.21e-14!29;UBERON:0001893!3.21e-14!29;UBERON:0003076!5.97e-10!12;UBERON:0003057!5.97e-10!12;UBERON:0000956!2.98e-08!21;UBERON:0001869!2.98e-08!21;UBERON:0000203!2.98e-08!21;UBERON:0002240!5.50e-08!6;UBERON:0005174!5.50e-08!6;UBERON:0001137!5.50e-08!6;UBERON:0002420!7.75e-08!8;UBERON:0007245!7.75e-08!8;UBERON:0010009!7.75e-08!8;UBERON:0010011!7.75e-08!8;UBERON:0000454!7.75e-08!8;UBERON:0000369!2.43e-07!5;UBERON:0002435!2.43e-07!5;UBERON:0000204!2.43e-07!5;UBERON:0010082!2.43e-07!5;UBERON:0001948!4.71e-07!5;UBERON:0002315!4.71e-07!5|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.22e-14,54;UBERON:0001049,8.52e-12,52;UBERON:0005068,8.52e-12,52;UBERON:0006241,8.52e-12,52;UBERON:0007135,8.52e-12,52;UBERON:0001017,1.45e-10,73;UBERON:0002020,2.49e-10,34;UBERON:0001016,2.82e-10,75;UBERON:0002616,3.25e-10,46;UBERON:0000955,5.42e-10,47;UBERON:0006238,5.42e-10,47;UBERON:0002346,1.57e-09,64;UBERON:0003075,1.57e-09,64;UBERON:0007284,1.57e-09,64;UBERON:0002780,6.78e-09,39;UBERON:0001890,6.78e-09,39;UBERON:0006240,6.78e-09,39;UBERON:0000369,1.01e-08,5;UBERON:0002435,1.01e-08,5;UBERON:0000204,1.01e-08,5;UBERON:0010082,1.01e-08,5;UBERON:0003080,1.14e-08,40;UBERON:0003528,1.56e-08,29;UBERON:0002791,1.56e-08,29;UBERON:0001893,1.56e-08,29;UBERON:0010371,2.57e-08,73;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0003056,4.66e-07,49|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0.725362142011344,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.270011876663381,0.210324961351382,0.285650984403804,0.662605622854841,0.122490799214954,0.191690942036473,0,1.10115880999389,0.638436690425939,0.46081959976873,0.395658863190582,0.548925861614458,1.04182674111352,0.279182999001381,0,0.45839474333043,2.06240009831567,0.996601765593721,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,11.1006754611131,0,0,0,0,0.149790639404823,1.83000241127451,0.879580464790051,1.04294592115366,0.255715457330331,1.0389402227978,0.648965052271031,0,0,0,0.210441855886474,0.130120442962704,0,0,0,0.136072998302656,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387904974335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0.481651769963376,0.586058432961016,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.642642632843614,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0,0.304464949114599,0,0,0,0.16488625294148,0,0,0,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0,0,0,0,0.194915761479505,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,1.35096360967266,0.906284817968409,1.55328093525546,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0|short_description=p@chr17:37191724..37191766,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:37191724..37191766,+ | |||
|description=CAGE_peak_at_chr17:37191724..37191766,+ | |||
|id=chr17:37191724..37191766,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.91e-15!23;CL:0000337!1.91e-15!23;CL:0000540!3.10e-10!33;CL:0000047!3.10e-10!33;CL:0000031!3.10e-10!33;CL:0000404!3.10e-10!33;CL:0002319!3.15e-08!43;CL:0000221!6.70e-08!44;CL:0000133!6.70e-08!44;CL:0000393!9.13e-08!39;CL:0000211!9.13e-08!39 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.80e-26!52;UBERON:0005068!1.80e-26!52;UBERON:0006241!1.80e-26!52;UBERON:0007135!1.80e-26!52;UBERON:0001017!3.08e-26!73;UBERON:0005743!3.08e-26!73;UBERON:0000073!3.86e-25!75;UBERON:0001016!3.86e-25!75;UBERON:0000955!1.71e-24!50;UBERON:0006238!1.71e-24!50;UBERON:0004121!1.70e-23!102;UBERON:0000924!1.70e-23!102;UBERON:0006601!1.70e-23!102;UBERON:0002616!2.14e-23!49;UBERON:0000033!4.55e-23!63;UBERON:0002346!5.20e-23!71;UBERON:0003075!5.20e-23!71;UBERON:0007284!5.20e-23!71;UBERON:0002020!2.10e-19!34;UBERON:0003080!2.35e-17!40;UBERON:0003056!4.68e-17!49;UBERON:0002780!9.96e-17!39;UBERON:0001890!9.96e-17!39;UBERON:0006240!9.96e-17!39;UBERON:0007811!2.88e-16!86;UBERON:0000153!1.06e-14!94;UBERON:0002791!3.21e-14!29;UBERON:0003528!3.21e-14!29;UBERON:0001893!3.21e-14!29;UBERON:0003076!5.97e-10!12;UBERON:0003057!5.97e-10!12;UBERON:0000956!2.98e-08!21;UBERON:0001869!2.98e-08!21;UBERON:0000203!2.98e-08!21;UBERON:0002240!5.50e-08!6;UBERON:0005174!5.50e-08!6;UBERON:0001137!5.50e-08!6;UBERON:0002420!7.75e-08!8;UBERON:0007245!7.75e-08!8;UBERON:0010009!7.75e-08!8;UBERON:0010011!7.75e-08!8;UBERON:0000454!7.75e-08!8;UBERON:0000369!2.43e-07!5;UBERON:0002435!2.43e-07!5;UBERON:0000204!2.43e-07!5;UBERON:0010082!2.43e-07!5;UBERON:0001948!4.71e-07!5;UBERON:0002315!4.71e-07!5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.22e-14,54;UBERON:0001049,8.52e-12,52;UBERON:0005068,8.52e-12,52;UBERON:0006241,8.52e-12,52;UBERON:0007135,8.52e-12,52;UBERON:0001017,1.45e-10,73;UBERON:0002020,2.49e-10,34;UBERON:0001016,2.82e-10,75;UBERON:0002616,3.25e-10,46;UBERON:0000955,5.42e-10,47;UBERON:0006238,5.42e-10,47;UBERON:0002346,1.57e-09,64;UBERON:0003075,1.57e-09,64;UBERON:0007284,1.57e-09,64;UBERON:0002780,6.78e-09,39;UBERON:0001890,6.78e-09,39;UBERON:0006240,6.78e-09,39;UBERON:0000369,1.01e-08,5;UBERON:0002435,1.01e-08,5;UBERON:0000204,1.01e-08,5;UBERON:0010082,1.01e-08,5;UBERON:0003080,1.14e-08,40;UBERON:0003528,1.56e-08,29;UBERON:0002791,1.56e-08,29;UBERON:0001893,1.56e-08,29;UBERON:0010371,2.57e-08,73;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95;UBERON:0003056,4.66e-07,49 | |||
|phase1_expression=0,0,0,0,0,0,0,0.129123323441576,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0.725362142011344,0,0,0,0,0.809265843438391,0,0,0,0,0,0,0,0,0.384218305321555,0.103689612308478,0.270011876663381,0.210324961351382,0.285650984403804,0.662605622854841,0.122490799214954,0.191690942036473,0,1.10115880999389,0.638436690425939,0.46081959976873,0.395658863190582,0.548925861614458,1.04182674111352,0.279182999001381,0,0.45839474333043,2.06240009831567,0.996601765593721,0.372798891650601,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0.258937883647172,0,0.173485326766136,0,0,0,0,0,0,0,0,0,0,0,0,0.585561594023094,11.1006754611131,0,0,0,0,0.149790639404823,1.83000241127451,0.879580464790051,1.04294592115366,0.255715457330331,1.0389402227978,0.648965052271031,0,0,0,0.210441855886474,0.130120442962704,0,0,0,0.136072998302656,0.2562274405697,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.210289948564127,0.617427674275707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387904974335251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.172684981865896,0,0,0,0,0.275936746304732,0.481651769963376,0.586058432961016,0,0,0,0.390438744296638,0,0,0,0,0,0,0,0.642642632843614,0,0.178065603667255,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214337035031592,0.177340233642274,0.356737635204141,0,0.304464949114599,0,0,0,0.16488625294148,0,0,0,0.164140899745061,0,0.370850604021019,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0,0.104859344425711,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0,0,0,0,0,0.194915761479505,0,0,0.226730383615211,0,0,0,0,0,0,0,0,0,0.460325236507177,0.572895513439397,0.343706364687375,0,0,0,1.35096360967266,0.906284817968409,1.55328093525546,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0.25347929989024,0,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.25384382367503,0,0.263069711437843,0.135804113845862,0,0,0.0985044823755635,0,0,0,0.249810577937946,0,0.214871054048298,0.191288332068843,0,0 | |||
|short_description=p@chr17:37191724..37191766,+ | |||
}} |
Latest revision as of 21:06, 4 August 2015
Short description: | p@chr17:37191724..37191766, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:37191724..37191766, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.22e-14 | 54 |
neural tube | 8.52e-12 | 52 |
neural rod | 8.52e-12 | 52 |
future spinal cord | 8.52e-12 | 52 |
neural keel | 8.52e-12 | 52 |
central nervous system | 1.45e-10 | 73 |
gray matter | 2.49e-10 | 34 |
nervous system | 2.82e-10 | 75 |
regional part of brain | 3.25e-10 | 46 |
brain | 5.42e-10 | 47 |
future brain | 5.42e-10 | 47 |
neurectoderm | 1.57e-09 | 64 |
neural plate | 1.57e-09 | 64 |
presumptive neural plate | 1.57e-09 | 64 |
regional part of forebrain | 6.78e-09 | 39 |
forebrain | 6.78e-09 | 39 |
future forebrain | 6.78e-09 | 39 |
corpus striatum | 1.01e-08 | 5 |
striatum | 1.01e-08 | 5 |
ventral part of telencephalon | 1.01e-08 | 5 |
future corpus striatum | 1.01e-08 | 5 |
anterior neural tube | 1.14e-08 | 40 |
brain grey matter | 1.56e-08 | 29 |
regional part of telencephalon | 1.56e-08 | 29 |
telencephalon | 1.56e-08 | 29 |
ecto-epithelium | 2.57e-08 | 73 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
pre-chordal neural plate | 4.66e-07 | 49 |