FFCP PHASE1:Mm9::chr12:25515988..25516001,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:25515988..25516001,- | |||
|description=CAGE_peak_at_chr12:25515988..25516001,- | |description=CAGE_peak_at_chr12:25515988..25516001,- | ||
|id=chr12:25515988..25516001,- | |id=chr12:25515988..25516001,- | ||
|ontology_enrichment_celltype=CL:0000540!2.97e-14!33;CL:0000047!2.97e-14!33;CL:0000031!2.97e-14!33;CL:0000404!2.97e-14!33;CL:0000221!1.70e-10!44;CL:0000133!1.70e-10!44;CL:0000393!2.90e-10!39;CL:0000211!2.90e-10!39;CL:0002319!3.81e-10!43;CL:0000117!2.02e-09!23;CL:0000337!2.02e-09!23;CL:0000055!3.58e-07!50 | |ontology_enrichment_celltype=CL:0000540!2.97e-14!33;CL:0000047!2.97e-14!33;CL:0000031!2.97e-14!33;CL:0000404!2.97e-14!33;CL:0000221!1.70e-10!44;CL:0000133!1.70e-10!44;CL:0000393!2.90e-10!39;CL:0000211!2.90e-10!39;CL:0002319!3.81e-10!43;CL:0000117!2.02e-09!23;CL:0000337!2.02e-09!23;CL:0000055!3.58e-07!50 | ||
|ontology_enrichment_celltype_v019_2=CL:0000117,2.50e-17,23;CL:0000337,2.50e-17,23;CL:0000540,2.70e-13,33;CL:0000047,2.70e-13,33;CL:0000031,2.70e-13,33;CL:0000404,2.70e-13,33;CL:0002609,3.15e-12,6;CL:0002319,3.59e-11,43;CL:0000221,7.54e-11,44;CL:0000133,7.54e-11,44;CL:0000393,7.98e-11,39;CL:0000211,7.98e-11,39;CL:0002613,1.24e-10,3;CL:0000120,2.04e-10,3;CL:0002608,5.39e-10,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!1.94e-08!73;UBERON:0005743!1.94e-08!73;UBERON:0004121!6.50e-08!102;UBERON:0000924!6.50e-08!102;UBERON:0006601!6.50e-08!102;UBERON:0000073!7.87e-08!75;UBERON:0001016!7.87e-08!75 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000369,2.44e-10,5;UBERON:0002435,2.44e-10,5;UBERON:0000204,2.44e-10,5;UBERON:0010082,2.44e-10,5;UBERON:0003056,7.42e-09,49;UBERON:0002020,1.21e-08,34;UBERON:0003528,1.46e-08,29;UBERON:0002791,1.46e-08,29;UBERON:0001893,1.46e-08,29;UBERON:0001017,2.33e-08,73;UBERON:0004121,2.47e-08,95;UBERON:0000924,2.47e-08,95;UBERON:0006601,2.47e-08,95;UBERON:0001016,4.86e-08,75;UBERON:0002346,3.05e-07,64;UBERON:0003075,3.05e-07,64;UBERON:0007284,3.05e-07,64;UBERON:0002780,3.46e-07,39;UBERON:0001890,3.46e-07,39;UBERON:0006240,3.46e-07,39;UBERON:0001954,5.03e-07,7;UBERON:0003022,5.03e-07,7;UBERON:0002421,5.03e-07,7;UBERON:0000349,5.03e-07,7;UBERON:0002600,5.03e-07,7;UBERON:0003080,5.90e-07,40;UBERON:0002102,8.68e-07,7;UBERON:0004710,8.68e-07,7;UBERON:0005419,8.68e-07,7;UBERON:0005417,8.68e-07,7;UBERON:0005729,8.68e-07,7 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0.336093799142464,0,0,0,3.03474691289397,5.81890077199236,2.53532561402472,0,0,0,0,0,0,0.384218305321555,1.14058573539325,0.675029691658453,1.47227472945967,0,0.441737081903227,2.20483438586917,2.39613677545591,2.75765635983006,0,0.510749352340751,0.307213066512487,3.82470234417562,3.56801810049398,6.25096044668112,0,0,0.15279824777681,0.294628585473668,0.569486723196412,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0,1.25654352112864,0.173824320192276,0,0.62336413367868,0,0.305518091550949,0,0,0,0.910843100738926,1.37941262660084,0.900310649026746,1.65775299619287,1.02054748726992,0.512454881139399,0.843315521037559,0.258703370739016,1.5089759505299,1.70195472151037,2.63926686245923,1.09597866213787,0.278047249225598,0.348252166522167,0,1.19420560091096,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0.420579897128254,1.23485534855141,0,0,1.70630600428187,1.39342003116263,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0.571242563048644,0,0,0.775809948670503,0.210407459670956,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.488894929326078,0.509235257325564,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.788175720530955,0,0.478364305972461,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0.631016438832513,0.780877488593277,0.861693590931196,0.238968797952552,0.891194696329576,1.41538265394416,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0.141940085208269,0.35613120733451,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,1.44048875225048,0.258717367565509,0,0.709360934569094,0.356737635204141,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21435195506795,0.609958401380546,0.108005340821801,0,0,0,0,0,0,0,0,0.448549638131936,0.827292452285488,0.194451188344048,0.516639293910924,0.337912250981556,0.234714477291508,0,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,2.39414924040619,2.04880326904961,0.486213434136588,0.838452650511929,0.551530525350042,0.222246727801615,0.618105171716683,0,0.252697211763798,0.760437899670719,0,0.280924522409647,0.704276676453562,0.516919220600519,0,0.463537303779422,0.38581844092741,0,0.294397840268795,1.37147700954166,0.177475806159338,0.953744759789284,0.436039249896986,0.376437521661322,0.592302255241736,0.73171189149109,0.526139422875686,0.814824683075171,0.561142271657738,0.237270036248348,0.788035859004508,0,0.77468420592983,0.192906610981141,0.249810577937946,0,0,0,0,0.463735671240843 | |phase1_expression=0.640595388419176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0.635030673459631,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.43752564364972,0,0,0.336093799142464,0,0,0,3.03474691289397,5.81890077199236,2.53532561402472,0,0,0,0,0,0,0.384218305321555,1.14058573539325,0.675029691658453,1.47227472945967,0,0.441737081903227,2.20483438586917,2.39613677545591,2.75765635983006,0,0.510749352340751,0.307213066512487,3.82470234417562,3.56801810049398,6.25096044668112,0,0,0.15279824777681,0.294628585473668,0.569486723196412,2.42319279572891,0,0,0,0,0,0,0,0,0,0,0,0,0.422530259330042,0,0,0,0,0,0,0.11418387971906,0,0.148442139064825,0.173485326766136,0,0,0.150722640552623,0.117588707135705,0,0,0,0,0,0,0,0,0,0.209446706813455,0,0,0,0.127070227073065,0,0,1.25654352112864,0.173824320192276,0,0.62336413367868,0,0.305518091550949,0,0,0,0.910843100738926,1.37941262660084,0.900310649026746,1.65775299619287,1.02054748726992,0.512454881139399,0.843315521037559,0.258703370739016,1.5089759505299,1.70195472151037,2.63926686245923,1.09597866213787,0.278047249225598,0.348252166522167,0,1.19420560091096,0,0,0,0.207125772535502,0.234526059981096,0.36012412292203,0.23674473558521,0,0,0,0,0.233530684734339,0,0.164167464079095,0.0810688095458557,0.146199987425332,0,0,0.420579897128254,1.23485534855141,0,0,1.70630600428187,1.39342003116263,0.257734922644187,0.403367049246685,0.22237804384487,0,0,0,0,0.198956472041151,0,0,0,0,0.379335801906163,0.571242563048644,0,0,0.775809948670503,0.210407459670956,0.189709611372772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.488894929326078,0.509235257325564,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.788175720530955,0,0.478364305972461,0.163863314715738,0,0,0,0,0,0,0.160550589987792,0.35163505977661,0,0,0.631016438832513,0.780877488593277,0.861693590931196,0.238968797952552,0.891194696329576,1.41538265394416,0.404810701674894,0.584511715822624,0.395287777946524,0.321321316421807,0.141940085208269,0.35613120733451,0,0.164970122972535,0,0,0,0,0.295301892880773,0,0,0,0,0,0,0,0,1.44048875225048,0.258717367565509,0,0.709360934569094,0.356737635204141,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.21435195506795,0.609958401380546,0.108005340821801,0,0,0,0,0,0,0,0,0.448549638131936,0.827292452285488,0.194451188344048,0.516639293910924,0.337912250981556,0.234714477291508,0,0.209718688851422,0,0,0.316011120628178,0,0,0,0,0.198681354781265,0,0,0,0.0762068066549998,0,0,0,0.233753804363138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31136204275253,2.39414924040619,2.04880326904961,0.486213434136588,0.838452650511929,0.551530525350042,0.222246727801615,0.618105171716683,0,0.252697211763798,0.760437899670719,0,0.280924522409647,0.704276676453562,0.516919220600519,0,0.463537303779422,0.38581844092741,0,0.294397840268795,1.37147700954166,0.177475806159338,0.953744759789284,0.436039249896986,0.376437521661322,0.592302255241736,0.73171189149109,0.526139422875686,0.814824683075171,0.561142271657738,0.237270036248348,0.788035859004508,0,0.77468420592983,0.192906610981141,0.249810577937946,0,0,0,0,0.463735671240843 | ||
|short_description=p@chr12:25515988..25516001,- | |short_description=p@chr12:25515988..25516001,- | ||
}} | }} |
Latest revision as of 22:10, 4 August 2015
Short description: | p@chr12:25515988..25516001, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:25515988..25516001, - |
Coexpression cluster: | MCL_coexpression_mm9:22 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 2.50e-17 | 23 |
neuroblast (sensu Vertebrata) | 2.50e-17 | 23 |
neuron | 2.70e-13 | 33 |
neuronal stem cell | 2.70e-13 | 33 |
neuroblast | 2.70e-13 | 33 |
electrically signaling cell | 2.70e-13 | 33 |
neuron of cerebral cortex | 3.15e-12 | 6 |
neural cell | 3.59e-11 | 43 |
ectodermal cell | 7.54e-11 | 44 |
neurectodermal cell | 7.54e-11 | 44 |
electrically responsive cell | 7.98e-11 | 39 |
electrically active cell | 7.98e-11 | 39 |
striatum neuron | 1.24e-10 | 3 |
granule cell | 2.04e-10 | 3 |
hippocampal neuron | 5.39e-10 | 3 |
Ontology term | p-value | n |
---|---|---|
corpus striatum | 2.44e-10 | 5 |
striatum | 2.44e-10 | 5 |
ventral part of telencephalon | 2.44e-10 | 5 |
future corpus striatum | 2.44e-10 | 5 |
pre-chordal neural plate | 7.42e-09 | 49 |
gray matter | 1.21e-08 | 34 |
brain grey matter | 1.46e-08 | 29 |
regional part of telencephalon | 1.46e-08 | 29 |
telencephalon | 1.46e-08 | 29 |
central nervous system | 2.33e-08 | 73 |
ectoderm-derived structure | 2.47e-08 | 95 |
ectoderm | 2.47e-08 | 95 |
presumptive ectoderm | 2.47e-08 | 95 |
nervous system | 4.86e-08 | 75 |
neurectoderm | 3.05e-07 | 64 |
neural plate | 3.05e-07 | 64 |
presumptive neural plate | 3.05e-07 | 64 |
regional part of forebrain | 3.46e-07 | 39 |
forebrain | 3.46e-07 | 39 |
future forebrain | 3.46e-07 | 39 |
Ammon's horn | 5.03e-07 | 7 |
lobe parts of cerebral cortex | 5.03e-07 | 7 |
hippocampal formation | 5.03e-07 | 7 |
limbic system | 5.03e-07 | 7 |
limbic lobe | 5.03e-07 | 7 |
anterior neural tube | 5.90e-07 | 40 |
forelimb | 8.68e-07 | 7 |
pectoral appendage | 8.68e-07 | 7 |
pectoral appendage bud | 8.68e-07 | 7 |
forelimb bud | 8.68e-07 | 7 |
forelimb/pectoral fin field | 8.68e-07 | 7 |