FFCP PHASE1:Mm9::chr4:142835790..142835793,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(3 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=58 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:142835790..142835793,- | |||
|description=CAGE_peak_at_chr4:142835790..142835793,- | |description=CAGE_peak_at_chr4:142835790..142835793,- | ||
|id=chr4:142835790..142835793,- | |id=chr4:142835790..142835793,- | ||
|ontology_enrichment_celltype=CL:0000473!8.33e-20!3;CL:0000627!8.33e-20!3;CL:0000682!8.33e-20!3;CL:0000239!5.31e-18!6;CL:0000677!5.31e-18!6;CL:0000212!5.31e-18!6;CL:0000584!5.31e-18!6;CL:0000075!1.80e-15!7;CL:0000066!2.75e-12!25;CL:0002563!4.33e-12!9;CL:0002251!4.33e-12!9;CL:0002076!2.51e-07!15 | |ontology_enrichment_celltype=CL:0000473!8.33e-20!3;CL:0000627!8.33e-20!3;CL:0000682!8.33e-20!3;CL:0000239!5.31e-18!6;CL:0000677!5.31e-18!6;CL:0000212!5.31e-18!6;CL:0000584!5.31e-18!6;CL:0000075!1.80e-15!7;CL:0000066!2.75e-12!25;CL:0002563!4.33e-12!9;CL:0002251!4.33e-12!9;CL:0002076!2.51e-07!15 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,6.34e-47,6;CL:0000677,6.34e-47,6;CL:0000584,6.34e-47,6;CL:0000075,2.31e-40,7;CL:0002563,1.33e-31,9;CL:0002251,1.33e-31,9;CL:0002076,2.63e-19,15;CL:0000066,5.10e-18,25;CL:0000223,1.13e-14,20;CL:0000682,5.46e-07,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.48e-20!15;UBERON:0001962!1.69e-13!2;UBERON:0001961!1.69e-13!2;UBERON:0001744!1.69e-13!2;UBERON:0004923!1.17e-12!24;UBERON:0001242!1.50e-12!13;UBERON:0000060!1.50e-12!13;UBERON:0001262!1.50e-12!13;UBERON:0004786!1.50e-12!13;UBERON:0003350!4.33e-12!9;UBERON:0004808!4.33e-12!9;UBERON:0001277!4.33e-12!9;UBERON:0000485!6.25e-10!11;UBERON:0002465!2.63e-09!3;UBERON:0003199!1.14e-07!1;UBERON:0000473!3.48e-07!14 | |ontology_enrichment_uberon=UBERON:0000344!1.48e-20!15;UBERON:0001962!1.69e-13!2;UBERON:0001961!1.69e-13!2;UBERON:0001744!1.69e-13!2;UBERON:0004923!1.17e-12!24;UBERON:0001242!1.50e-12!13;UBERON:0000060!1.50e-12!13;UBERON:0001262!1.50e-12!13;UBERON:0004786!1.50e-12!13;UBERON:0003350!4.33e-12!9;UBERON:0004808!4.33e-12!9;UBERON:0001277!4.33e-12!9;UBERON:0000485!6.25e-10!11;UBERON:0002465!2.63e-09!3;UBERON:0003199!1.14e-07!1;UBERON:0000473!3.48e-07!14 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,1.33e-31,9;UBERON:0004808,1.33e-31,9;UBERON:0001277,1.33e-31,9;UBERON:0000485,5.07e-26,11;UBERON:0001242,3.77e-22,13;UBERON:0001262,3.77e-22,13;UBERON:0004786,3.77e-22,13;UBERON:0000344,2.63e-19,15;UBERON:0004923,2.40e-12,24;UBERON:0000160,1.04e-09,31 | |||
|phase1_expression=0,2.79180326111489,3.18499467572675,0,0,2.18243053485457,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.68822784320151,0.57423196411502,0.86152399231815,1.07735616342945,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,2.79180326111489,3.18499467572675,0,0,2.18243053485457,1.16806320297763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.319984845586813,0.68822784320151,0.57423196411502,0.86152399231815,1.07735616342945,0,0,0.221730510655305,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0.129159823477731,0.337912250981556,0,0,0.104859344425711,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr4:142835790..142835793,- | |short_description=p@chr4:142835790..142835793,- | ||
}} | }} |
Latest revision as of 03:03, 5 August 2015
Short description: | p@chr4:142835790..142835793, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:142835790..142835793, - |
Coexpression cluster: | MCL_coexpression_mm9:58 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 6.34e-47 | 6 |
gut absorptive cell | 6.34e-47 | 6 |
enterocyte | 6.34e-47 | 6 |
columnar/cuboidal epithelial cell | 2.31e-40 | 7 |
intestinal epithelial cell | 1.33e-31 | 9 |
epithelial cell of alimentary canal | 1.33e-31 | 9 |
endo-epithelial cell | 2.63e-19 | 15 |
epithelial cell | 5.10e-18 | 25 |
endodermal cell | 1.13e-14 | 20 |
M cell of gut | 5.46e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 1.33e-31 | 9 |
gastrointestinal system epithelium | 1.33e-31 | 9 |
intestinal epithelium | 1.33e-31 | 9 |
simple columnar epithelium | 5.07e-26 | 11 |
intestinal mucosa | 3.77e-22 | 13 |
wall of intestine | 3.77e-22 | 13 |
gastrointestinal system mucosa | 3.77e-22 | 13 |
mucosa | 2.63e-19 | 15 |
organ component layer | 2.40e-12 | 24 |
intestine | 1.04e-09 | 31 |