FFCP PHASE1:Mm9::chr12:74737680..74737682,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=1103|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr12:74737680..74737682,+|id=chr12:74737680..74737682,+|ontology_enrichment_celltype=CL:0000791!2.91e-08!9;CL:0000789!2.91e-08!9;CL:0002420!2.91e-08!9;CL:0002419!2.91e-08!9;CL:0000790!2.91e-08!9;CL:0000624!1.43e-07!8;CL:0000084!3.37e-07!11;CL:0000827!3.37e-07!11|ontology_enrichment_celltype_v019_2=CL:0000791,4.15e-24,9;CL:0000789,4.15e-24,9;CL:0002420,4.15e-24,9;CL:0002419,4.15e-24,9;CL:0000790,4.15e-24,9;CL:0000624,1.74e-20,8;CL:0000084,1.34e-19,11;CL:0000827,1.34e-19,11;CL:0000838,6.57e-18,12;CL:0000542,1.78e-16,13;CL:0000051,1.78e-16,13;CL:0000738,4.79e-16,17;CL:0002087,4.79e-16,17;CL:0000893,1.24e-12,6;CL:0002489,1.24e-12,6;CL:0000898,1.24e-12,6;CL:0000809,1.24e-12,6;CL:0000810,1.24e-12,6;CL:0000895,1.24e-12,6;CL:0000808,1.24e-12,6;CL:0000894,1.24e-12,6;CL:0000806,1.24e-12,6;CL:0000807,1.24e-12,6;CL:0000805,1.24e-12,6;CL:0002425,1.24e-12,6;CL:0002436,1.24e-12,6;CL:0002427,1.24e-12,6;CL:0002428,1.24e-12,6;CL:0002429,1.24e-12,6;CL:0002433,1.24e-12,6;CL:0002431,1.24e-12,6;CL:0002432,1.24e-12,6;CL:0002031,1.38e-10,25;CL:0000988,4.84e-08,32;CL:0002032,4.84e-08,32;CL:0000037,4.84e-08,32;CL:0000837,4.84e-08,32;CL:0002320,9.67e-07,46;CL:0000134,9.67e-07,46|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0001004!2.98e-15!42;UBERON:0000065!1.14e-14!41;UBERON:0000077!3.34e-12!97;UBERON:0001041!1.99e-11!92;UBERON:0006562!8.40e-11!24;UBERON:0001557!8.40e-11!24;UBERON:0001042!8.40e-11!24;UBERON:0008814!8.40e-11!24;UBERON:0009145!8.40e-11!24;UBERON:0003408!1.01e-10!24;UBERON:0004177!1.89e-10!29;UBERON:0000072!2.48e-10!27;UBERON:0002370!3.72e-10!23;UBERON:0000974!3.72e-10!23;UBERON:0004807!3.72e-10!23;UBERON:0005058!3.72e-10!23;UBERON:0003351!3.72e-10!23;UBERON:0009113!3.72e-10!23;UBERON:0003295!3.72e-10!23;UBERON:0009722!3.72e-10!23;UBERON:0005562!3.72e-10!23;UBERON:0007690!3.72e-10!23;UBERON:0000926!6.70e-10!193;UBERON:0004120!6.70e-10!193;UBERON:0006603!6.70e-10!193;UBERON:0003081!3.28e-09!88;UBERON:0003104!1.43e-08!131;UBERON:0009142!1.43e-08!131;UBERON:0001048!2.47e-08!147;UBERON:0002390!4.10e-07!45;UBERON:0003061!4.10e-07!45;UBERON:0005057!6.37e-07!51;UBERON:0002193!9.68e-07!48|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.55e-11,23;UBERON:0000974,1.55e-11,23;UBERON:0004807,1.55e-11,23;UBERON:0005058,1.55e-11,23;UBERON:0003351,1.55e-11,23;UBERON:0009113,1.55e-11,23;UBERON:0003295,1.55e-11,23;UBERON:0009722,1.55e-11,23;UBERON:0005562,1.55e-11,23;UBERON:0007690,1.55e-11,23;UBERON:0000077,2.38e-11,35;UBERON:0004177,3.20e-11,29;UBERON:0005057,3.20e-11,29;UBERON:0006562,5.16e-11,24;UBERON:0003408,5.16e-11,24;UBERON:0001557,5.16e-11,24;UBERON:0001042,5.16e-11,24;UBERON:0008814,5.16e-11,24;UBERON:0009145,5.16e-11,24;UBERON:0000072,1.13e-09,27;UBERON:0000065,1.58e-09,41;UBERON:0001004,2.90e-09,42;UBERON:0002390,2.17e-08,45;UBERON:0003061,2.17e-08,45;UBERON:0002193,9.03e-08,48;UBERON:0002405,9.03e-08,48;UBERON:0005911,1.35e-07,69;UBERON:0001041,1.83e-07,80;UBERON:0007811,5.38e-07,36;UBERON:0003929,8.75e-07,55;UBERON:0002384,9.67e-07,46|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,1.54867594366833,2.34064526321993,1.54096171402954,0.8774937489487,1.71200729931206,0.786783621770977,0.333109761815663,0.202475267389826,0,0.473193248037357,0.274228867211478,0,1.02051948181284,0,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,1.00828139742739,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0.142371680799103,0,0,0,2.31891590961342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0.517875767294343,0,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0.20778804455956,0.324482526135515,0.203678727700633,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.281105173679186,0,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0.284163499395593,0,0.234526059981096,0.180062061461015,0,0.983821158737019,0.462801338662135,0.465067889500816,0.536546802799238,0,0.493679549740441,0.492502392237286,0.324275238183423,0.146199987425332,0.658650345873152,0.536825675041487,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,1.79763881730844,0,0.199141273254367,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.210407459670956,0.252946148497029,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.324270453550071,0.274561413188081,2.87536413054709,0.372140947668503,0.624075346229121,0,0.179397413521912,0,0.739012760666419,0.189491411770485,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.315270288212382,0.664394068946325,0.637819074629948,1.47476983244164,1.72684981865896,0.289298117163023,0,1.08781136763742,0,0,0,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0.469343416127421,0.21183207086382,0,0.49465875882444,0.645857706783622,0.241251699712623,0.477489376012546,0,0,0,1.02522528478712,0,0.185194527369712,0.188368457004691,0.136694227721025,0.457556346413045,0.679913719975421,0.279902904647316,0.552799895217695,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.944050424693745,0.247960367176008,0.523511883968059,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0.948033361884535,0.405450430580328,0.616265742988964,0.649604114888975,0.179026695667481,0.198681354781265,1.08175904567972,1.32920574457119,0.706765149637033,0.838274873204998,0.403304740547362,0.584747284438515,1.34696578296461,1.28564592399726,0.906921534460845,0,0,0,0.19318959403219,0.375364950902364,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.187283014939765,0.256100609619477,0.0574354689556133,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,1.02860775715625,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0.57386499620653,0,0|short_description=p@chr12:74737680..74737682,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=1103 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr12:74737680..74737682,+ | |||
|description=CAGE_peak_at_chr12:74737680..74737682,+ | |||
|id=chr12:74737680..74737682,+ | |||
|ontology_enrichment_celltype=CL:0000791!2.91e-08!9;CL:0000789!2.91e-08!9;CL:0002420!2.91e-08!9;CL:0002419!2.91e-08!9;CL:0000790!2.91e-08!9;CL:0000624!1.43e-07!8;CL:0000084!3.37e-07!11;CL:0000827!3.37e-07!11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.15e-24,9;CL:0000789,4.15e-24,9;CL:0002420,4.15e-24,9;CL:0002419,4.15e-24,9;CL:0000790,4.15e-24,9;CL:0000624,1.74e-20,8;CL:0000084,1.34e-19,11;CL:0000827,1.34e-19,11;CL:0000838,6.57e-18,12;CL:0000542,1.78e-16,13;CL:0000051,1.78e-16,13;CL:0000738,4.79e-16,17;CL:0002087,4.79e-16,17;CL:0000893,1.24e-12,6;CL:0002489,1.24e-12,6;CL:0000898,1.24e-12,6;CL:0000809,1.24e-12,6;CL:0000810,1.24e-12,6;CL:0000895,1.24e-12,6;CL:0000808,1.24e-12,6;CL:0000894,1.24e-12,6;CL:0000806,1.24e-12,6;CL:0000807,1.24e-12,6;CL:0000805,1.24e-12,6;CL:0002425,1.24e-12,6;CL:0002436,1.24e-12,6;CL:0002427,1.24e-12,6;CL:0002428,1.24e-12,6;CL:0002429,1.24e-12,6;CL:0002433,1.24e-12,6;CL:0002431,1.24e-12,6;CL:0002432,1.24e-12,6;CL:0002031,1.38e-10,25;CL:0000988,4.84e-08,32;CL:0002032,4.84e-08,32;CL:0000037,4.84e-08,32;CL:0000837,4.84e-08,32;CL:0002320,9.67e-07,46;CL:0000134,9.67e-07,46 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001004!2.98e-15!42;UBERON:0000065!1.14e-14!41;UBERON:0000077!3.34e-12!97;UBERON:0001041!1.99e-11!92;UBERON:0006562!8.40e-11!24;UBERON:0001557!8.40e-11!24;UBERON:0001042!8.40e-11!24;UBERON:0008814!8.40e-11!24;UBERON:0009145!8.40e-11!24;UBERON:0003408!1.01e-10!24;UBERON:0004177!1.89e-10!29;UBERON:0000072!2.48e-10!27;UBERON:0002370!3.72e-10!23;UBERON:0000974!3.72e-10!23;UBERON:0004807!3.72e-10!23;UBERON:0005058!3.72e-10!23;UBERON:0003351!3.72e-10!23;UBERON:0009113!3.72e-10!23;UBERON:0003295!3.72e-10!23;UBERON:0009722!3.72e-10!23;UBERON:0005562!3.72e-10!23;UBERON:0007690!3.72e-10!23;UBERON:0000926!6.70e-10!193;UBERON:0004120!6.70e-10!193;UBERON:0006603!6.70e-10!193;UBERON:0003081!3.28e-09!88;UBERON:0003104!1.43e-08!131;UBERON:0009142!1.43e-08!131;UBERON:0001048!2.47e-08!147;UBERON:0002390!4.10e-07!45;UBERON:0003061!4.10e-07!45;UBERON:0005057!6.37e-07!51;UBERON:0002193!9.68e-07!48 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.55e-11,23;UBERON:0000974,1.55e-11,23;UBERON:0004807,1.55e-11,23;UBERON:0005058,1.55e-11,23;UBERON:0003351,1.55e-11,23;UBERON:0009113,1.55e-11,23;UBERON:0003295,1.55e-11,23;UBERON:0009722,1.55e-11,23;UBERON:0005562,1.55e-11,23;UBERON:0007690,1.55e-11,23;UBERON:0000077,2.38e-11,35;UBERON:0004177,3.20e-11,29;UBERON:0005057,3.20e-11,29;UBERON:0006562,5.16e-11,24;UBERON:0003408,5.16e-11,24;UBERON:0001557,5.16e-11,24;UBERON:0001042,5.16e-11,24;UBERON:0008814,5.16e-11,24;UBERON:0009145,5.16e-11,24;UBERON:0000072,1.13e-09,27;UBERON:0000065,1.58e-09,41;UBERON:0001004,2.90e-09,42;UBERON:0002390,2.17e-08,45;UBERON:0003061,2.17e-08,45;UBERON:0002193,9.03e-08,48;UBERON:0002405,9.03e-08,48;UBERON:0005911,1.35e-07,69;UBERON:0001041,1.83e-07,80;UBERON:0007811,5.38e-07,36;UBERON:0003929,8.75e-07,55;UBERON:0002384,9.67e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,1.29123323441576,1.54867594366833,2.34064526321993,1.54096171402954,0.8774937489487,1.71200729931206,0.786783621770977,0.333109761815663,0.202475267389826,0,0.473193248037357,0.274228867211478,0,1.02051948181284,0,0.261199789138935,0,0,0,0,0,0,0.252030129759931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.90144856804538,1.00828139742739,0,0.286533439938757,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.220868540951614,0,0,0,0,0.127687338085188,0.153606533256243,0,0,0,0,0,0,0,0.142371680799103,0,0,0,2.31891590961342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.216491041011214,0.253359865475099,0,0.22836775943812,0.517875767294343,0,0,0,0.230615497256059,0.150722640552623,0.352766121407114,0,0,0,0,0,0.220841518460394,0,0,0,0,0,0.11981512450592,0,0.254140454146129,0,0,0,0,0,0.20778804455956,0.324482526135515,0.203678727700633,0,0.252722758433675,0.210441855886474,0.130120442962704,0,0.180062129805349,0.150704817835715,0.136072998302656,0,0.281105173679186,0,0,0,0.175951124163949,0.219195732427575,0.278047249225598,0.348252166522167,0.205782136407943,0,0,0,0.284163499395593,0,0.234526059981096,0.180062061461015,0,0.983821158737019,0.462801338662135,0.465067889500816,0.536546802799238,0,0.493679549740441,0.492502392237286,0.324275238183423,0.146199987425332,0.658650345873152,0.536825675041487,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0,0,0.397912944082302,0.19496408711912,1.79763881730844,0,0.199141273254367,0,0.114248512609729,0,0.610953983535943,0.387904974335251,0.210407459670956,0.252946148497029,0.147610147979602,0,0.123397163921801,0,0.166845105716094,0,0,0,0,0.25462585178142,0,0.324270453550071,0.274561413188081,2.87536413054709,0.372140947668503,0.624075346229121,0,0.179397413521912,0,0.739012760666419,0.189491411770485,0,0.169745085775188,0.234690248288502,0.335012514883631,0.238043640886014,0.390267295715598,0.315270288212382,0.664394068946325,0.637819074629948,1.47476983244164,1.72684981865896,0.289298117163023,0,1.08781136763742,0,0,0,0.234423373184406,0,0.252470927204373,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.302323556964751,0,0,0,0.258428293168221,0.363533729477506,0.356497378384721,0.316036757935816,0,0,0,0,0.129358683782755,0.214337035031592,0,0,0,0,0.469343416127421,0.21183207086382,0,0.49465875882444,0.645857706783622,0.241251699712623,0.477489376012546,0,0,0,1.02522528478712,0,0.185194527369712,0.188368457004691,0.136694227721025,0.457556346413045,0.679913719975421,0.279902904647316,0.552799895217695,0,0,0,0.108005340821801,0.418176592028937,0.218362563746178,0.944050424693745,0.247960367176008,0.523511883968059,0.129614973291793,0.621339313086926,0,0,0.165458490457098,0,0.129159823477731,0,0.117357238645754,0.13020438484395,0,0,0,0.948033361884535,0.405450430580328,0.616265742988964,0.649604114888975,0.179026695667481,0.198681354781265,1.08175904567972,1.32920574457119,0.706765149637033,0.838274873204998,0.403304740547362,0.584747284438515,1.34696578296461,1.28564592399726,0.906921534460845,0,0,0,0.19318959403219,0.375364950902364,0,0.428736758158132,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0.341467211508268,0,0,0,0,0.206035057238894,0.320919209591815,0.252697211763798,0.25347929989024,0,0.187283014939765,0.256100609619477,0.0574354689556133,0.476293691283074,0.115884325944855,0.38581844092741,0.412085900803307,0.147198920134397,1.02860775715625,0,0,0,0.0941093804153306,0.0846146078916765,0,0,0.135804113845862,0,0.118635018124174,0.197008964751127,0.409231043169689,0,0.192906610981141,0,0,0.214871054048298,0.57386499620653,0,0 | |||
|short_description=p@chr12:74737680..74737682,+ | |||
}} |
Latest revision as of 05:33, 5 August 2015
Short description: | p@chr12:74737680..74737682, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr12:74737680..74737682, + |
Coexpression cluster: | MCL_coexpression_mm9:1103 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.55e-11 | 23 |
neck | 1.55e-11 | 23 |
respiratory system epithelium | 1.55e-11 | 23 |
hemolymphoid system gland | 1.55e-11 | 23 |
pharyngeal epithelium | 1.55e-11 | 23 |
thymic region | 1.55e-11 | 23 |
pharyngeal gland | 1.55e-11 | 23 |
entire pharyngeal arch endoderm | 1.55e-11 | 23 |
thymus primordium | 1.55e-11 | 23 |
early pharyngeal endoderm | 1.55e-11 | 23 |
mixed endoderm/mesoderm-derived structure | 2.38e-11 | 35 |
hemopoietic organ | 3.20e-11 | 29 |
immune organ | 3.20e-11 | 29 |
pharynx | 5.16e-11 | 24 |
gland of gut | 5.16e-11 | 24 |
upper respiratory tract | 5.16e-11 | 24 |
chordate pharynx | 5.16e-11 | 24 |
pharyngeal arch system | 5.16e-11 | 24 |
pharyngeal region of foregut | 5.16e-11 | 24 |
segment of respiratory tract | 1.13e-09 | 27 |
respiratory tract | 1.58e-09 | 41 |
respiratory system | 2.90e-09 | 42 |
hematopoietic system | 2.17e-08 | 45 |
blood island | 2.17e-08 | 45 |
hemolymphoid system | 9.03e-08 | 48 |
immune system | 9.03e-08 | 48 |
endo-epithelium | 1.35e-07 | 69 |
foregut | 1.83e-07 | 80 |
craniocervical region | 5.38e-07 | 36 |
gut epithelium | 8.75e-07 | 55 |
connective tissue | 9.67e-07 | 46 |