FFCP PHASE1:Mm9::chr9:57351819..57351875,+: Difference between revisions
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{{FFCP|EntrezGene=102614|HGNC=|MCL_coexpression_id=3713|UniProt=Q91WE3|association_with_transcript=-33bp_to_ENSMUST00000080514,NM_133982,uc009puy.1_5end|description=CAGE_peak_1_at_Rpp25_5end|id=chr9:57351819..57351875,+|ontology_enrichment_celltype=CL:0000117!1.87e-10!23;CL:0000337!1.87e-10!23;CL:0000540!1.82e-08!33;CL:0000047!1.82e-08!33;CL:0000031!1.82e-08!33;CL:0000404!1.82e-08!33;CL:0000393!5.58e-08!39;CL:0000211!5.58e-08!39|ontology_enrichment_celltype_v019_2=CL:0000117,4.78e-11,23;CL:0000337,4.78e-11,23;CL:0000540,5.83e-09,33;CL:0000047,5.83e-09,33;CL:0000031,5.83e-09,33;CL:0000404,5.83e-09,33;CL:0000393,5.36e-08,39;CL:0000211,5.36e-08,39|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002020!7.95e-13!34;UBERON:0002791!3.23e-11!29;UBERON:0003528!3.23e-11!29;UBERON:0001893!3.23e-11!29;UBERON:0001017!5.49e-10!73;UBERON:0005743!5.49e-10!73;UBERON:0000073!1.56e-09!75;UBERON:0001016!1.56e-09!75;UBERON:0001049!3.93e-09!52;UBERON:0005068!3.93e-09!52;UBERON:0006241!3.93e-09!52;UBERON:0007135!3.93e-09!52;UBERON:0000955!4.65e-09!50;UBERON:0006238!4.65e-09!50;UBERON:0002346!1.16e-08!71;UBERON:0003075!1.16e-08!71;UBERON:0007284!1.16e-08!71;UBERON:0000956!1.56e-08!21;UBERON:0001869!1.56e-08!21;UBERON:0000203!1.56e-08!21;UBERON:0002616!1.60e-08!49;UBERON:0000468!7.04e-08!333;UBERON:0004121!2.28e-07!102;UBERON:0000924!2.28e-07!102;UBERON:0006601!2.28e-07!102;UBERON:0000922!2.45e-07!328;UBERON:0003080!2.67e-07!40;UBERON:0002780!8.45e-07!39;UBERON:0001890!8.45e-07!39;UBERON:0006240!8.45e-07!39;UBERON:0002619!9.16e-07!17|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.54e-14,34;UBERON:0010314,3.22e-12,92;UBERON:0003528,4.45e-12,29;UBERON:0002791,4.45e-12,29;UBERON:0001893,4.45e-12,29;UBERON:0001017,1.93e-10,73;UBERON:0000073,2.36e-10,54;UBERON:0001016,1.58e-09,75;UBERON:0001049,2.17e-09,52;UBERON:0005068,2.17e-09,52;UBERON:0006241,2.17e-09,52;UBERON:0007135,2.17e-09,52;UBERON:0000956,3.24e-09,21;UBERON:0001869,3.24e-09,21;UBERON:0000203,3.24e-09,21;UBERON:0000955,5.11e-08,47;UBERON:0006238,5.11e-08,47;UBERON:0003080,6.65e-08,40;UBERON:0002616,1.76e-07,46;UBERON:0002780,2.30e-07,39;UBERON:0001890,2.30e-07,39;UBERON:0006240,2.30e-07,39;UBERON:0002619,2.53e-07,17;UBERON:0002346,2.82e-07,64;UBERON:0003075,2.82e-07,64;UBERON:0007284,2.82e-07,64;UBERON:0007100,5.61e-07,18;UBERON:0000948,5.61e-07,18;UBERON:0005498,5.61e-07,18;UBERON:0004140,5.61e-07,18;UBERON:0009881,5.61e-07,18;UBERON:0004141,5.61e-07,18;UBERON:0003084,5.61e-07,18;UBERON:0007005,5.61e-07,18;UBERON:0004139,5.61e-07,18;UBERON:0004291,5.61e-07,18;UBERON:0002021,8.36e-07,10;UBERON:0000411,8.36e-07,10;UBERON:0001950,8.36e-07,10|phase1_expression=0.160148847104794,2.09385244583617,0,0,0,1.51091344720701,1.40167584357315,0.129123323441576,1.83025338797167,1.17032263160997,1.02730780935303,1.83475965689274,0,0.174840804837995,0,0,0,0,0,0,4.16712121740242,0.198581902401771,0.261199789138935,1.11994695955385,0.68822784320151,0.57423196411502,1.7230479846363,1.72376986148711,0.570070258369122,0.252030129759931,0.443461021310609,0.635030673459631,0,0,3.46621943701529,4.65457007003779,2.85837098767317,0,0,0,0,0,0,0.377690453926732,0.304130793658544,0.917733760808408,0.782391344348039,0.872100625521786,0.219686182734472,0,0.139986421625363,1.43752564364972,0,0,0,7.71778308107841,15.1862723167541,3.6097046459421,20.8385954685386,16.9277113367051,16.4796164911607,2.37191172448392,0,0,0,0.7104801149461,0,0.384218305321555,10.2652716185393,12.6905582031789,14.5124223332454,5.99867067247988,8.61387309711293,16.4137670948038,15.9103481890272,17.4651569455904,19.82085857989,12.5133591323484,13.3637683932932,8.17694983927202,7.04454855738554,5.2091337055676,16.4717969410815,5.6276261003168,8.70950012327818,9.42811473515737,6.83384067835694,10.8111678578674,0.984440513331393,0.755715601067855,0.579728977403356,0.860423876981386,0,0,0,0,1.40444420131752,0,0,0,0.281686839553361,0,0,0,0,0.506719730950197,0.505524445014783,1.48439043634778,0,2.52351636410202,9.71517829890361,4.26251669636998,6.22661842591358,3.01445281105245,5.05631440683531,0.753999547978053,2.71914464507811,5.92857363371638,0,0.161766849947409,0,0,7.45567044872489,2.04946557908083,1.46612694769419,1.27728527604296,0.239630249011841,0,0,37.4476598512057,11.8950156732843,12.1884721549478,19.2944995413427,13.2972037811772,18.7009240103604,14.4394724130304,12.9335992089902,0.124406970610093,0.252722758433675,2.94618598241064,0.520481771850815,1.37941262660084,0.900310649026746,0.452114453507145,0.340182495756639,0.896796041993948,1.12442069471675,4.65666067330228,0,0.567318240503458,0.175951124163949,0.876782929710299,0.834141747676794,0.696504333044333,0.205782136407943,30.0541742895925,0,0.51469581422943,0.284163499395593,13.4631752148076,8.44293815931946,8.10279276574567,9.70653415899362,8.26409773339096,11.8785676923281,8.8362899005155,11.5357562601836,5.13767506415546,11.6837493438571,8.86504306027114,6.48550476366846,4.09359964790931,7.02560368931362,3.4893668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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:102614 | |||
|HGNC= | |||
|MCL_coexpression_id=3713 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91WE3 | |||
|association_with_transcript=-33bp_to_ENSMUST00000080514,NM_133982,uc009puy.1_5end | |||
|cluster_id=chr9:57351819..57351875,+ | |||
|description=CAGE_peak_1_at_Rpp25_5end | |||
|id=chr9:57351819..57351875,+ | |||
|ontology_enrichment_celltype=CL:0000117!1.87e-10!23;CL:0000337!1.87e-10!23;CL:0000540!1.82e-08!33;CL:0000047!1.82e-08!33;CL:0000031!1.82e-08!33;CL:0000404!1.82e-08!33;CL:0000393!5.58e-08!39;CL:0000211!5.58e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000117,4.78e-11,23;CL:0000337,4.78e-11,23;CL:0000540,5.83e-09,33;CL:0000047,5.83e-09,33;CL:0000031,5.83e-09,33;CL:0000404,5.83e-09,33;CL:0000393,5.36e-08,39;CL:0000211,5.36e-08,39 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002020!7.95e-13!34;UBERON:0002791!3.23e-11!29;UBERON:0003528!3.23e-11!29;UBERON:0001893!3.23e-11!29;UBERON:0001017!5.49e-10!73;UBERON:0005743!5.49e-10!73;UBERON:0000073!1.56e-09!75;UBERON:0001016!1.56e-09!75;UBERON:0001049!3.93e-09!52;UBERON:0005068!3.93e-09!52;UBERON:0006241!3.93e-09!52;UBERON:0007135!3.93e-09!52;UBERON:0000955!4.65e-09!50;UBERON:0006238!4.65e-09!50;UBERON:0002346!1.16e-08!71;UBERON:0003075!1.16e-08!71;UBERON:0007284!1.16e-08!71;UBERON:0000956!1.56e-08!21;UBERON:0001869!1.56e-08!21;UBERON:0000203!1.56e-08!21;UBERON:0002616!1.60e-08!49;UBERON:0000468!7.04e-08!333;UBERON:0004121!2.28e-07!102;UBERON:0000924!2.28e-07!102;UBERON:0006601!2.28e-07!102;UBERON:0000922!2.45e-07!328;UBERON:0003080!2.67e-07!40;UBERON:0002780!8.45e-07!39;UBERON:0001890!8.45e-07!39;UBERON:0006240!8.45e-07!39;UBERON:0002619!9.16e-07!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002020,8.54e-14,34;UBERON:0010314,3.22e-12,92;UBERON:0003528,4.45e-12,29;UBERON:0002791,4.45e-12,29;UBERON:0001893,4.45e-12,29;UBERON:0001017,1.93e-10,73;UBERON:0000073,2.36e-10,54;UBERON:0001016,1.58e-09,75;UBERON:0001049,2.17e-09,52;UBERON:0005068,2.17e-09,52;UBERON:0006241,2.17e-09,52;UBERON:0007135,2.17e-09,52;UBERON:0000956,3.24e-09,21;UBERON:0001869,3.24e-09,21;UBERON:0000203,3.24e-09,21;UBERON:0000955,5.11e-08,47;UBERON:0006238,5.11e-08,47;UBERON:0003080,6.65e-08,40;UBERON:0002616,1.76e-07,46;UBERON:0002780,2.30e-07,39;UBERON:0001890,2.30e-07,39;UBERON:0006240,2.30e-07,39;UBERON:0002619,2.53e-07,17;UBERON:0002346,2.82e-07,64;UBERON:0003075,2.82e-07,64;UBERON:0007284,2.82e-07,64;UBERON:0007100,5.61e-07,18;UBERON:0000948,5.61e-07,18;UBERON:0005498,5.61e-07,18;UBERON:0004140,5.61e-07,18;UBERON:0009881,5.61e-07,18;UBERON:0004141,5.61e-07,18;UBERON:0003084,5.61e-07,18;UBERON:0007005,5.61e-07,18;UBERON:0004139,5.61e-07,18;UBERON:0004291,5.61e-07,18;UBERON:0002021,8.36e-07,10;UBERON:0000411,8.36e-07,10;UBERON:0001950,8.36e-07,10 | |||
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| |||
|short_description=p1@Rpp25 | |||
}} |
Revision as of 09:02, 5 August 2015
Short description: | p1@Rpp25 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Rpp25_5end |
Coexpression cluster: | MCL_coexpression_mm9:3713 |
Association with transcript: | -33bp_to_ENSMUST00000080514, NM_133982, uc009puy.1_5end |
EntrezGene: | 102614 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CNS neuron (sensu Vertebrata) | 4.78e-11 | 23 |
neuroblast (sensu Vertebrata) | 4.78e-11 | 23 |
neuron | 5.83e-09 | 33 |
neuronal stem cell | 5.83e-09 | 33 |
neuroblast | 5.83e-09 | 33 |
electrically signaling cell | 5.83e-09 | 33 |
electrically responsive cell | 5.36e-08 | 39 |
electrically active cell | 5.36e-08 | 39 |