FFCP PHASE1:Mm9::chr1:180336546..180336570,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=517 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:180336546..180336570,- | |||
|description=CAGE_peak_at_chr1:180336546..180336570,- | |description=CAGE_peak_at_chr1:180336546..180336570,- | ||
|id=chr1:180336546..180336570,- | |id=chr1:180336546..180336570,- | ||
|ontology_enrichment_celltype=CL:0000063!1.23e-08!66;CL:0002320!7.19e-07!46;CL:0000134!7.19e-07!46 | |ontology_enrichment_celltype=CL:0000063!1.23e-08!66;CL:0002320!7.19e-07!46;CL:0000134!7.19e-07!46 | ||
|ontology_enrichment_celltype_v019_2=CL:0002320,1.08e-12,46;CL:0000134,1.08e-12,46;CL:0000219,1.70e-10,54;CL:0000988,3.00e-10,32;CL:0002032,3.00e-10,32;CL:0000037,3.00e-10,32;CL:0000837,3.00e-10,32;CL:0000034,3.20e-09,97;CL:0000723,2.78e-08,91;CL:0000048,2.78e-08,91;CL:0002563,3.13e-08,9;CL:0002251,3.13e-08,9;CL:0000791,5.52e-08,9;CL:0000789,5.52e-08,9;CL:0002420,5.52e-08,9;CL:0002419,5.52e-08,9;CL:0000790,5.52e-08,9;CL:0002031,1.04e-07,25;CL:0000624,2.99e-07,8;CL:0000838,3.35e-07,12 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!7.19e-07!46 | |ontology_enrichment_uberon=UBERON:0002384!7.19e-07!46 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,1.08e-12,46;UBERON:0003350,3.13e-08,9;UBERON:0004808,3.13e-08,9;UBERON:0001277,3.13e-08,9;UBERON:0000485,9.55e-08,11 | |||
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|phase1_expression=0.640595388419176,1.74487703819681,1.36499771816861,3.32710632437513,3.00537437967808,2.35030980676646,0.700837921786577,5.4231795845462,4.08287294239834,3.04283884218592,1.02730780935303,0.957265907944037,2.22560948910567,2.27293046289393,0,0.809901069559304,0,2.05050407482854,1.23402990245165,1.27316895539409,0.850432901510698,0.297872853602656,0.261199789138935,0.319984845586813,1.14704640533585,1.14846392823004,0.86152399231815,0.430942465371778,0.570070258369122,0.756090389279792,0.886922042621219,6.98533740805594,4.30545351309199,0,2.02196133825892,1.99481574430191,3.26670970019791,2.51118978442145,2.3440060335714,2.61761871986899,14.1175557127443,2.04913645487534,2.42755176515577,1.1330713617802,1.4192770370732,0.917733760808408,0.782391344348039,0.218025156380447,0.439372365468944,0.194429899074283,0.279972843250725,1.43752564364972,3.18786951509699,2.17608642603403,1.34437519656986,0.257259436035947,0,0.515672092277442,0,0,0,0,0.889294796111139,0,0.988866362566974,0.7104801149461,0.299600110518405,0.768436610643109,0.414758449233911,0.405017814995072,0.420649922702764,0.285650984403804,0,0.489963196859816,0.383381884072945,0,0,0.766124028511126,0.614426133024974,0.395658863190582,0.365950574409639,0.52091337055676,0.837548997004143,0.56276261003168,0.763991238884051,0.294628585473668,0.284743361598206,0.372798891650601,0.227178579999552,0.226714680320357,8.98579914975201,1.72084775396277,2.03991400112325,0,1.94932925234301,1.34408066129201,0.280888840263504,1.1930122580464,1.03914401841148,1.06001872353102,1.12674735821344,0,0,0,0.649473123033642,0.760079596425296,0,0.45673551887624,1.03575153458869,0.593768556259299,0.346970653532272,0.304465478312141,0.461230994512117,0.452167921657868,0.352766121407114,0.753999547978053,0.494389935468748,1.01219549843938,1.76922110389975,0.323533699894818,0.441683036920787,0,0,2.04946557908083,2.30391377494801,0,2.63593273913025,1.79970819298022,1.27070227073065,0.599162557619291,2.28750301409313,0.251308704225729,0.173824320192276,0.767146371990992,0.20778804455956,0.973447578406546,0.712875546952214,0.497627882440372,1.0108910337347,1.47309299120532,0.260240885925407,0.919608417733892,1.0803727788321,0.30140963567143,0.612328492361951,0.512454881139399,0.562210347358373,1.03481348295606,0.215567992932842,0.189106080167819,0.879755620819744,0,0,0.348252166522167,0.61734640922383,0.995171334092466,0.702213187313235,2.31613116403244,1.13665399758237,0,0,0,0.23674473558521,0.393528463494808,0.308534225774757,0.465067889500816,0.536546802799238,0.350296027101508,0.493679549740441,0.492502392237286,0.810688095458557,0.730999937126662,0.439100230582101,0.939444931322602,1.47202963994889,0.92614151141356,1.32167513193519,0.528901133327089,0.213288250535234,0.232236671860439,0,0,0.444756087689741,0.570676878337677,0.474529061544512,0.164698954724011,0.251335208800269,0.397912944082302,0.58489226135736,0.898819408654221,0.216138049874694,0.398282546508734,1.89667900953082,0.571242563048644,0,0.407302655690628,0.193952487167626,0.420814919341911,0.316182685621286,0.442830443938806,0.31399745568275,1.1105744752962,0.296452627087149,0.166845105716094,0.196558995113203,0.899448449539415,0.608580364165509,0.241177159752417,0.25462585178142,0.863088412352432,0.324270453550071,0.274561413188081,0,0.372140947668503,0.312037673114561,0.505157755894224,0.179397413521912,0.964887042726734,0.554259570499814,0.37898282354097,0.488894929326078,0.339490171550376,0.704070744865506,0.335012514883631,0.714130922658041,0.195133647857799,0,0.44292937929755,0.318909537314974,0.655453258862952,0.345369963731791,1.3018415272336,1.50791283939272,0,0,0.551873492609465,0.642202359951168,0.703270119553219,0.163934945376675,2.01976741763498,0.94652465824877,0.780877488593277,0.861693590931196,1.19484398976276,1.11399337041197,0.566153061577665,0.809621403349789,0.876767573733936,0.395287777946524,1.28528526568723,0.567760340833074,0.712262414669021,0.162886959353576,0.329940245945071,1.32745138339963,0.242780636154981,0.906970670894253,0,0.590603785761546,0.614870295887855,0.258428293168221,0.727067458955011,0.356497378384721,1.26414703174326,1.05418608574999,2.06271086496374,0.340439605753788,0.720244376125241,0.517434735131018,0.643011105094777,1.06404140185364,0,0.822745103010605,0.913394847343798,0.469343416127421,0.21183207086382,0,1.15420377059036,0.322928853391811,0.301564624640779,0.119372344003136,0.328281799490123,0.874442509889552,0.741701208042039,0.341741761595705,0.206386867963223,0.925972636848558,0.188368457004691,0.546776910884101,0.228778173206523,2.20971958992012,2.6590775941495,1.10559979043539,0,1.26534397432454,0.609958401380546,0.432021363287205,1.04544148007234,0.655087691238533,0.404593039154462,0.330613822901344,0.523511883968059,0.259229946583586,1.24267862617385,0,0.448549638131936,0.827292452285488,0.388902376688095,0.516639293910924,0.506868376472335,0.469428954583016,0.781226309063701,0.838874755405687,0,0.288030006257865,0.948033361884535,0.202725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| ||
|short_description=p@chr1:180336546..180336570,- | |short_description=p@chr1:180336546..180336570,- | ||
}} | }} |
Latest revision as of 09:31, 5 August 2015
Short description: | p@chr1:180336546..180336570, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr1:180336546..180336570, - |
Coexpression cluster: | MCL_coexpression_mm9:517 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue cell | 1.08e-12 | 46 |
mesenchymal cell | 1.08e-12 | 46 |
motile cell | 1.70e-10 | 54 |
hematopoietic cell | 3.00e-10 | 32 |
hematopoietic oligopotent progenitor cell | 3.00e-10 | 32 |
hematopoietic stem cell | 3.00e-10 | 32 |
hematopoietic multipotent progenitor cell | 3.00e-10 | 32 |
stem cell | 3.20e-09 | 97 |
somatic stem cell | 2.78e-08 | 91 |
multi fate stem cell | 2.78e-08 | 91 |
intestinal epithelial cell | 3.13e-08 | 9 |
epithelial cell of alimentary canal | 3.13e-08 | 9 |
mature alpha-beta T cell | 5.52e-08 | 9 |
alpha-beta T cell | 5.52e-08 | 9 |
immature T cell | 5.52e-08 | 9 |
mature T cell | 5.52e-08 | 9 |
immature alpha-beta T cell | 5.52e-08 | 9 |
hematopoietic lineage restricted progenitor cell | 1.04e-07 | 25 |
CD4-positive, alpha-beta T cell | 2.99e-07 | 8 |
lymphoid lineage restricted progenitor cell | 3.35e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 1.08e-12 | 46 |
epithelium of mucosa | 3.13e-08 | 9 |
gastrointestinal system epithelium | 3.13e-08 | 9 |
intestinal epithelium | 3.13e-08 | 9 |
simple columnar epithelium | 9.55e-08 | 11 |