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FFCP PHASE1:Mm9::chr1:181448123..181448157,-: Difference between revisions

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{{FFCP|EntrezGene=69726|HGNC=|UniProt=Q9CWR2,D3YZ17|association_with_transcript=0bp_to_NM_027188,uc007dvj.1,uc007dvk.1_5end|description=CAGE_peak_1_at_Smyd3_5end|id=chr1:181448123..181448157,-|ontology_enrichment_celltype=CL:0000542!1.08e-07!13;CL:0000051!1.08e-07!13;CL:0000838!1.77e-07!12;CL:0000084!4.58e-07!11;CL:0000827!4.58e-07!11|ontology_enrichment_celltype_v019_2=CL:0000542,1.08e-07,13;CL:0000051,1.08e-07,13;CL:0000838,1.77e-07,12;CL:0000084,4.58e-07,11;CL:0000827,4.58e-07,11|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000153!3.81e-13!94;UBERON:0002370!1.42e-12!23;UBERON:0000974!1.42e-12!23;UBERON:0004807!1.42e-12!23;UBERON:0005058!1.42e-12!23;UBERON:0003351!1.42e-12!23;UBERON:0009113!1.42e-12!23;UBERON:0003295!1.42e-12!23;UBERON:0009722!1.42e-12!23;UBERON:0005562!1.42e-12!23;UBERON:0007690!1.42e-12!23;UBERON:0006562!2.05e-12!24;UBERON:0001557!2.05e-12!24;UBERON:0001042!2.05e-12!24;UBERON:0008814!2.05e-12!24;UBERON:0009145!2.05e-12!24;UBERON:0003408!2.38e-12!24;UBERON:0007811!2.86e-12!86;UBERON:0004177!1.21e-10!29;UBERON:0000072!4.92e-09!27;UBERON:0000065!1.22e-07!41;UBERON:0001004!1.24e-07!42;UBERON:0000063!1.65e-07!35|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.42e-12,23;UBERON:0000974,1.42e-12,23;UBERON:0004807,1.42e-12,23;UBERON:0005058,1.42e-12,23;UBERON:0003351,1.42e-12,23;UBERON:0009113,1.42e-12,23;UBERON:0003295,1.42e-12,23;UBERON:0009722,1.42e-12,23;UBERON:0005562,1.42e-12,23;UBERON:0007690,1.42e-12,23;UBERON:0006562,2.05e-12,24;UBERON:0001557,2.05e-12,24;UBERON:0001042,2.05e-12,24;UBERON:0008814,2.05e-12,24;UBERON:0009145,2.05e-12,24;UBERON:0003408,2.38e-12,24;UBERON:0004177,1.21e-10,29;UBERON:0005057,1.21e-10,29;UBERON:0007811,1.13e-09,36;UBERON:0000153,1.48e-09,43;UBERON:0000072,4.92e-09,27;UBERON:0000077,6.72e-09,35;UBERON:0000065,1.22e-07,41;UBERON:0001004,1.24e-07,42|phase1_expression=11.8510146857548,1.74487703819681,1.36499771816861,6.65421264875026,5.00895729946347,6.04365378882803,6.07392865548367,30.7313509790952,21.3998857670533,23.4064526321993,18.320322600129,24.0114198575963,32.3569379569979,29.7229368224591,9.99329285446988,10.1237633694913,0,23.3442002365096,28.5198021899937,28.434106670468,14.3723160355308,22.0425911665965,20.112383763698,3.99981056983517,3.44113921600755,0.57423196411502,3.01533397311352,3.66301095566011,3.6104449696711,7.56090389279792,3.99114919179548,12.065582795733,5.53558308826113,0,16.4645423258227,11.802659820453,16.5377178572519,2.92972141515835,3.1253413780952,4.18818995179039,4.1176204162171,6.83045484958446,4.36959317728038,18.758625878361,13.990016508293,12.664725899156,2.34717403304412,1.09012578190223,1.31811709640683,0.388859798148567,2.09979632438044,5.75010257459886,21.9795213935635,29.0144856804538,34.2815675125313,5.65970759279083,11.1748041576115,4.64104883049698,9.1042407386819,13.7537654610729,12.0427966666174,2.37191172448392,3.55717918444456,5.84934816232909,2.96659908770092,2.1314403448383,1.49800055259202,1.53687322128622,10.1615820062308,9.85543349821342,11.9885227970288,13.9968982357864,14.3564551618549,7.22695715368229,6.61333750025831,7.35375029288017,16.5173821499083,17.3654779795855,19.8152427900554,8.44072241473241,7.95942499340964,5.73004707612436,18.7052609330925,21.3849791812038,22.9197371665215,17.0884579574727,11.8168495063255,8.76077395378913,5.90664307998836,5.66786700800891,14.4932244350839,8.60423876981386,5.439770669662,4.85732872474035,7.79731700937203,4.92829575807069,7.3031098468511,7.6693645160126,7.27400812888033,8.83348936275851,10.2815696436977,16.6824420638613,20.3844191765317,28.4426681261332,4.97929394325792,6.33399663687746,3.0331466700887,7.4219521817389,30.0367945030719,11.7269289861212,10.0621489524359,4.56698217468212,6.6878494204257,6.17962826265753,10.5829836422134,4.90099706185734,23.7307169024999,10.5557530551536,8.84610551949874,7.27950824763341,7.28777010919299,10.1823803158397,3.72783522436244,27.2286141220739,33.5114730901528,6.64188343542338,25.6404366442669,16.7972764678154,22.4914301919325,31.4560342750128,24.7050325522058,15.4554853098823,27.638066910572,26.0829766476937,20.5710164113964,23.2005006186893,10.5912938404329,10.9478134136882,14.6579199891531,14.7309299120532,15.0939713836736,8.27647575960503,7.02242306240862,10.5493372485001,11.2940588591204,12.9394857487698,11.056803498048,16.298312356558,9.7005596819779,14.7502742530899,16.7153567955751,8.54863356467542,16.4047877043103,10.7958171621872,15.4336602305958,17.9130840136644,16.8531164955176,13.8967869841946,25.0063879468122,7.87077935634907,8.67746421930056,7.56260658136262,9.94327889457883,9.83821158737019,12.4956361438776,11.6266972375204,9.65784245038629,9.5747580741079,8.55711219550098,8.04420573987567,8.431156192769,10.3801991071986,7.90380415047782,10.3338942445486,19.5569652164638,14.7153595702377,8.92130714056255,4.7601101999438,16.2099070406778,15.3276203427889,11.2114691350221,11.4959609035305,8.45036566610507,10.4624094361908,6.64340686162316,9.387840419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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:69726
|HGNC=
|TSSclassifier=NA
|UniProt=uniprot:Q9CWR2,uniprot:D3YZ17
|association_with_transcript=0bp_to_NM_027188,uc007dvj.1,uc007dvk.1_5end
|cluster_id=chr1:181448123..181448157,-
|description=CAGE_peak_1_at_Smyd3_5end
|id=chr1:181448123..181448157,-
|ontology_enrichment_celltype=CL:0000542!1.08e-07!13;CL:0000051!1.08e-07!13;CL:0000838!1.77e-07!12;CL:0000084!4.58e-07!11;CL:0000827!4.58e-07!11
|ontology_enrichment_celltype_v019_2=CL:0000542,1.08e-07,13;CL:0000051,1.08e-07,13;CL:0000838,1.77e-07,12;CL:0000084,4.58e-07,11;CL:0000827,4.58e-07,11
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0000153!3.81e-13!94;UBERON:0002370!1.42e-12!23;UBERON:0000974!1.42e-12!23;UBERON:0004807!1.42e-12!23;UBERON:0005058!1.42e-12!23;UBERON:0003351!1.42e-12!23;UBERON:0009113!1.42e-12!23;UBERON:0003295!1.42e-12!23;UBERON:0009722!1.42e-12!23;UBERON:0005562!1.42e-12!23;UBERON:0007690!1.42e-12!23;UBERON:0006562!2.05e-12!24;UBERON:0001557!2.05e-12!24;UBERON:0001042!2.05e-12!24;UBERON:0008814!2.05e-12!24;UBERON:0009145!2.05e-12!24;UBERON:0003408!2.38e-12!24;UBERON:0007811!2.86e-12!86;UBERON:0004177!1.21e-10!29;UBERON:0000072!4.92e-09!27;UBERON:0000065!1.22e-07!41;UBERON:0001004!1.24e-07!42;UBERON:0000063!1.65e-07!35
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.42e-12,23;UBERON:0000974,1.42e-12,23;UBERON:0004807,1.42e-12,23;UBERON:0005058,1.42e-12,23;UBERON:0003351,1.42e-12,23;UBERON:0009113,1.42e-12,23;UBERON:0003295,1.42e-12,23;UBERON:0009722,1.42e-12,23;UBERON:0005562,1.42e-12,23;UBERON:0007690,1.42e-12,23;UBERON:0006562,2.05e-12,24;UBERON:0001557,2.05e-12,24;UBERON:0001042,2.05e-12,24;UBERON:0008814,2.05e-12,24;UBERON:0009145,2.05e-12,24;UBERON:0003408,2.38e-12,24;UBERON:0004177,1.21e-10,29;UBERON:0005057,1.21e-10,29;UBERON:0007811,1.13e-09,36;UBERON:0000153,1.48e-09,43;UBERON:0000072,4.92e-09,27;UBERON:0000077,6.72e-09,35;UBERON:0000065,1.22e-07,41;UBERON:0001004,1.24e-07,42
|phase1_expression=11.8510146857548,1.74487703819681,1.36499771816861,6.65421264875026,5.00895729946347,6.04365378882803,6.07392865548367,30.7313509790952,21.3998857670533,23.4064526321993,18.320322600129,24.0114198575963,32.3569379569979,29.7229368224591,9.99329285446988,10.1237633694913,0,23.3442002365096,28.5198021899937,28.434106670468,14.3723160355308,22.0425911665965,20.112383763698,3.99981056983517,3.44113921600755,0.57423196411502,3.01533397311352,3.66301095566011,3.6104449696711,7.56090389279792,3.99114919179548,12.065582795733,5.53558308826113,0,16.4645423258227,11.802659820453,16.5377178572519,2.92972141515835,3.1253413780952,4.18818995179039,4.1176204162171,6.83045484958446,4.36959317728038,18.758625878361,13.990016508293,12.664725899156,2.34717403304412,1.09012578190223,1.31811709640683,0.388859798148567,2.09979632438044,5.75010257459886,21.9795213935635,29.0144856804538,34.2815675125313,5.65970759279083,11.1748041576115,4.64104883049698,9.1042407386819,13.7537654610729,12.0427966666174,2.37191172448392,3.55717918444456,5.84934816232909,2.96659908770092,2.1314403448383,1.49800055259202,1.53687322128622,10.1615820062308,9.85543349821342,11.9885227970288,13.9968982357864,14.3564551618549,7.22695715368229,6.61333750025831,7.35375029288017,16.5173821499083,17.3654779795855,19.8152427900554,8.44072241473241,7.95942499340964,5.73004707612436,18.7052609330925,21.3849791812038,22.9197371665215,17.0884579574727,11.8168495063255,8.76077395378913,5.90664307998836,5.66786700800891,14.4932244350839,8.60423876981386,5.439770669662,4.85732872474035,7.79731700937203,4.92829575807069,7.3031098468511,7.6693645160126,7.27400812888033,8.83348936275851,10.2815696436977,16.6824420638613,20.3844191765317,28.4426681261332,4.97929394325792,6.33399663687746,3.0331466700887,7.4219521817389,30.0367945030719,11.7269289861212,10.0621489524359,4.56698217468212,6.6878494204257,6.17962826265753,10.5829836422134,4.90099706185734,23.7307169024999,10.5557530551536,8.84610551949874,7.27950824763341,7.28777010919299,10.1823803158397,3.72783522436244,27.2286141220739,33.5114730901528,6.64188343542338,25.6404366442669,16.7972764678154,22.4914301919325,31.4560342750128,24.7050325522058,15.4554853098823,27.638066910572,26.0829766476937,20.5710164113964,23.2005006186893,10.5912938404329,10.9478134136882,14.6579199891531,14.7309299120532,15.0939713836736,8.27647575960503,7.02242306240862,10.5493372485001,11.2940588591204,12.9394857487698,11.056803498048,16.298312356558,9.7005596819779,14.7502742530899,16.7153567955751,8.54863356467542,16.4047877043103,10.7958171621872,15.4336602305958,17.9130840136644,16.8531164955176,13.8967869841946,25.0063879468122,7.87077935634907,8.67746421930056,7.56260658136262,9.94327889457883,9.83821158737019,12.4956361438776,11.6266972375204,9.65784245038629,9.5747580741079,8.55711219550098,8.04420573987567,8.431156192769,10.3801991071986,7.90380415047782,10.3338942445486,19.5569652164638,14.7153595702377,8.92130714056255,4.7601101999438,16.2099070406778,15.3276203427889,11.2114691350221,11.4959609035305,8.45036566610507,10.4624094361908,6.64340686162316,9.38784041926862,11.0587491872119,11.1415624343044,10.7230247915516,7.19055526923377,8.64552199498777,13.1433240347882,6.63837653335786,13.8240700257772,12.3978509240388,13.8482902934814,13.3827216145662,14.5181147172959,12.9634901104727,13.1373031701846,9.73392112616524,13.6970851953199,8.30067355844017,9.00963570866908,9.43483176543374,8.7696223830093,7.91154473415161,6.51178331331525,7.89340140522401,10.0693648107784,8.43103179230184,5.76578967694971,11.5014565221884,11.1642284300551,9.67316786655138,8.33510297225469,7.3552939543984,6.27176577772377,14.965008403495,13.2643988239339,14.3409179268983,14.0888421193406,15.7242466353296,12.2279567932526,9.75978927632656,6.24427673144956,6.62067605246002,10.6303051031412,9.8861956567642,12.7813385478276,15.3689633860647,12.8737662137545,15.0791283939272,3.26343410291226,6.39293554924747,12.417153583713,25.0458920380955,22.504643825703,7.70494243270374,10.856249869788,5.99465616890888,7.80877488593277,9.04778270477756,14.5770966751057,8.24355094104858,11.0399847007645,11.334699646897,9.9366991689846,10.2774822266096,26.0270266301664,14.0520684356186,14.7794451043822,14.985600260529,17.3218629121162,5.30980553359851,8.74010290157933,9.06970670894253,6.03536255218874,5.90603785761546,11.0676653259814,8.78656196771952,12.7236805317127,12.83390562185,11.0612865277536,6.32511651449993,5.15677716240934,29.2778060948258,11.5239100180039,8.14959707831353,10.0738406464848,12.0591358876746,11.7723419617367,11.1893334009442,8.22055362609418,6.8054795338476,8.89694697628045,8.15955072803359,15.6641940294406,11.7869031488011,11.0372652618525,12.5340961203293,11.8181447816444,5.53813589596716,23.9198639593557,12.9861869406368,13.002372681683,10.3708935327039,9.79515976424393,10.935538217682,11.8964650067392,32.2959016988325,33.7283000100016,33.8589935820838,8.59203556213602,12.4952717464548,13.2157653632452,15.8767851008048,14.6361807210128,15.940467153471,13.4864346384821,11.4061768900964,9.6849698534091,13.6095721956383,12.4267862617385,9.01908701894705,12.1108402295623,11.2511773510826,12.6393272423631,13.949260935595,12.6717094118084,14.787012069365,17.9682051084651,18.874681996628,13.5287107662563,14.6895303191511,24.6488674089979,13.3798642091508,19.9259256899765,19.8778859156026,18.4397496537506,25.2325320572206,26.6833897934331,24.5164615109798,29.5831698348073,34.9789242546449,31.6594221329679,29.2373642219257,32.5196024744314,36.3487165784679,12.6969014824518,11.0992976687032,9.5993826572139,5.03653849092235,18.5462010270903,8.07034644440082,13.7363718200449,10.9327873330324,12.5393026008841,14.1187960654267,16.5717085142584,18.3326564300607,11.5141632170271,14.3867329151835,18.8848474347425,17.550585006027,22.0657389579868,26.7354021300681,25.888015587591,8.92571189223919,9.97562183502578,13.3172212488225,7.53630822911712,6.91723436672342,5.88299227040045,12.0013233012872,9.88968274746692,9.30665707816264,13.8983466470089,11.9135270948413,12.260712190095,11.0496978814461,11.3964771280667,11.9465775427676,10.0021675169445,10.3137050090921,12.3461901096771,15.6592642305257,9.12633304833263,14.4005086001874,12.600782237313,12.3986818772607,12.7904846636449,14.2105164427149,12.5229619679681,10.6098224266208,13.9426947062057,13.5804113845862,10.661703161497,10.7957866492998,10.9339975436875,13.0953933814301,15.3387472774106,10.0311437710194,12.2407183189594,12.8662384644975,9.66919743217342,12.6250299165437,9.48543102213917,11.1296561097802
|short_description=p1@Smyd3
}}

Revision as of 09:40, 5 August 2015

Short description:p1@Smyd3
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_1_at_Smyd3_5end
Coexpression cluster:NA
Association with transcript: 0bp_to_NM_027188, uc007dvj.1, uc007dvk.1_5end
EntrezGene:69726
Link to Zenbu:ZENBU


View on UCSC genome browser

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CAGE Expression

Sample

p1@Smyd3

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G711.85
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I51.74
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I61.36
CD326+ enterocyte, pool1.CNhs13542.11848-124I36.65
CD326+ enterocyte, pool2.CNhs13197.11849-124I45.01
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.04
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E930.73
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E721.40
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F223.41
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E618.32
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F124.01
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E432.36
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E829.72
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A19.99
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A310.12
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A223.34
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A428.52
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A628.43
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A314.37
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H222.04
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I920.11
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D14.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D23.44
GP2+ M cell, pool1.CNhs13228.11845-124H90.57
GP2+ M cell, pool2.CNhs13231.11846-124I13.02
GP2+ M cell, pool3.CNhs13240.11847-124I23.66
Ileum epithelium, pool1.CNhs13199.10252-104B93.61
Ileum epithelium, pool2.CNhs13232.10253-104C17.56
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C83.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I312.07
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G65.54
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F516.46
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F611.80
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F716.54
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G82.93
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H34.19
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G94.12
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H26.83
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D818.76
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D913.99
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B312.66
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B72.35
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C21.09
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B81.32
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C42.10
Mouse Astrocytes, donor3.CNhs12107.11633-122C45.75
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A221.98
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I929.01
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A134.28
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C15.66
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E111.17
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C54.64
Mouse Granule cells, donor1.CNhs12131.11713-123C39.10
Mouse Granule cells, donor2.CNhs12357.11731-123E313.75
Mouse Granule cells, donor3.CNhs12108.11636-122C712.04
Mouse Meningeal cells, donor1.CNhs12132.11716-123C62.37
Mouse Meningeal cells, donor3.CNhs12109.11639-122D13.56
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C75.85
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E72.97
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D22.13
Mouse Microglia, donor1.CNhs12629.11718-123C81.50
Mouse Microglia, donor2.CNhs12634.11736-123E81.54
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D510.16
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F59.86
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D911.99
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F114.00
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D514.36
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F26.61
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D67.35
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D316.52
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F317.37
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D719.82
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D48.44
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F47.96
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D85.73
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E418.71
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E521.38
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I622.92
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D617.09
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F611.82
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.76
Mouse Schwann, donor1.CNhs12507.11728-123D95.91
Mouse Schwann, donor2.CNhs12573.11746-123F95.67
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G314.49
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F78.60
Mouse hepatocyte, donor1.CNhs13078.11714-123C45.44
Mouse hepatocyte, donor3.CNhs12615.11637-122C84.86
Mouse hepatocyte, donor6.CNhs13090.11822-124F47.80
Mouse hepatocyte, donor8.CNhs13091.11824-124F64.93
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.30
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I77.67
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E37.27
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G610.28
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H116.68
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I820.38
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B628.44
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G14.98
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G26.33
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G33.03
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B67.42
accessory axillary lymph node, adult.CNhs10475.1063-29H930.04
adrenal gland, adult.CNhs10508.49-24D711.73
adrenal gland, embryo E14.CNhs11038.406-44C510.06
adrenal gland, embryo E16.CNhs11004.1254-43D64.57
adrenal gland, embryo E17.CNhs11043.1263-45I16.69
adrenal gland, embryo E18.CNhs11026.1262-18F56.18
adrenal gland, neonate N00.CNhs11191.1311-23C110.58
adrenal gland, neonate N25.CNhs11223.1377-27I34.90
amnion, adult pregnant day17.5.CNhs10488.583-22A823.73
aorta, adult.CNhs10498.46-23H110.56
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F57.28
bone (os femoris), neonate N16.CNhs11225.1525-43A67.29
bone (os femoris), neonate N20.CNhs11195.1350-25C310.18
cecum, adult.CNhs10467.37-13H43.73
cerebellum, adult.CNhs10494.15-8B227.23
cerebellum, neonate N30.CNhs11135.1395-42I233.51
colon, adult.CNhs10468.36-18H76.64
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C725.64
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D116.80
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D422.49
corpora quadrigemina, adult.CNhs10501.16-22A431.46
corpus striatum, adult.CNhs10487.19-21D824.71
corpus striatum, neonate N00.CNhs11226.630-43F115.46
cortex, adult.CNhs10473.12-14D527.64
cortex, neonate N30.CNhs11107.1392-42F226.08
diencephalon, adult.CNhs10482.20-12F220.57
diencephalon, neonate N30.CNhs11201.1388-42B223.20
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B110.59
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A210.95
epididymis, adult.CNhs10490.58-23B214.66
eyeball, adult.CNhs10484.31-12G414.73
eyeball, embryo E12.CNhs11016.345-16C615.09
eyeball, embryo E14.CNhs10521.399-16E28.28
eyeball, embryo E15.CNhs10593.426-16C97.02
eyeball, embryo E17.CNhs11023.1261-18D410.55
eyeball, neonate N00.CNhs11207.633-15C611.29
eyeball, neonate N01.CNhs11140.1532-43E712.94
eyeball, neonate N02.CNhs11205.1551-44G811.06
eyeball, neonate N16.CNhs11188.777-19A216.30
forelimb, embryo E11.CNhs10596.335-25E29.70
forelimb, embryo E12.CNhs10600.359-14H214.75
forelimb, embryo E13.CNhs10589.384-1E216.72
forelimb, embryo E14.CNhs10577.413-26A88.55
forelimb, embryo E15.CNhs11007.437-20E716.40
forelimb, embryo E17.CNhs10598.1517-43C410.80
forelimb, embryo E18.CNhs11008.1520-43B515.43
gonad, embryo E13.CNhs11044.1564-45I617.91
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C816.85
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D213.90
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D525.01
heart, embryo E11.CNhs10586.331-24E97.87
heart, embryo E12.CNhs11015.353-12F58.68
heart, embryo E13.CNhs11013.376-3I97.56
heart, embryo E14.CNhs10597.403-26D49.94
heart, embryo E15.CNhs11017.431-16C89.84
heart, embryo E16.CNhs11021.457-17C612.50
heart, embryo E17.CNhs11025.479-18E511.63
heart, embryo E18.CNhs11030.1283-20G39.66
heart, neonate N00.CNhs11213.639-21E39.57
heart, neonate N03.CNhs11221.1349-25I28.56
heart, neonate N10.CNhs11118.749-24G18.04
heart, neonate N16.CNhs11209.782-15G18.43
heart, neonate N20.CNhs11127.821-26I610.38
heart, neonate N25.CNhs11196.1351-25D37.90
heart, neonate N30.CNhs11202.1390-42D210.33
hippocampus, adult.CNhs10478.13-16E819.56
hippocampus, neonate N00.CNhs11228.627-43G114.72
intestinal mucosa, adult.CNhs10506.860-29I38.92
intestine, adult.CNhs10496.178-9A34.76
intestine, embryo E12.CNhs11019.1251-16I516.21
intestine, embryo E13.CNhs11010.381-16D515.33
intestine, embryo E15.CNhs10602.976-16D811.21
intestine, embryo E16.CNhs10585.463-22H411.50
intestine, embryo E17.CNhs10582.482-18D38.45
intestine, embryo E18.CNhs10526.1289-20F710.46
intestine, neonate N00.CNhs11126.644-26D16.64
intestine, neonate N01.CNhs11192.1322-23E99.39
intestine, neonate N06.CNhs11102.688-20B811.06
intestine, neonate N07.CNhs11095.720-20F211.14
intestine, neonate N10.CNhs11098.755-23A510.72
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E38.65
intestine, neonate N30.CNhs11131.1384-42G113.14
kidney, embryo E14.CNhs10606.411-4I96.64
kidney, embryo E15.CNhs10997.434-16F813.82
kidney, embryo E16.CNhs10584.464-22A512.40
kidney, embryo E17.CNhs11028.483-18I213.85
kidney, embryo E18.CNhs11001.1288-20C713.38
kidney, neonate N00.CNhs11214.646-21G714.52
kidney, neonate N10.CNhs11206.758-6D512.96
kidney, neonate N20.CNhs11113.832-19I113.14
kidney, neonate N25.CNhs11122.1353-25F39.73
kidney, neonate N30.CNhs11203.1385-42H113.70
liver, adult pregnant day01.CNhs10466.508-5B28.30
liver, embryo E12.CNhs10601.355-15F89.01
liver, embryo E13.CNhs10524.378-3H69.43
liver, embryo E14.CNhs10594.409-16E18.77
liver, embryo E15.CNhs10520.433-16D77.91
liver, embryo E16.CNhs10523.462-17F56.51
liver, embryo E17.CNhs10510.481-18A37.89
liver, embryo E18.CNhs10579.499-43G410.07
liver, neonate N00.CNhs11117.641-24F48.43
liver, neonate N03.CNhs11123.1345-25G25.77
liver, neonate N06.CNhs11101.684-20A811.50
liver, neonate N07.CNhs11103.716-20H211.16
liver, neonate N10.CNhs11115.751-24B99.67
liver, neonate N20.CNhs11220.823-25A38.34
liver, neonate N25.CNhs11198.1368-26H17.36
liver, neonate N30.CNhs11106.1382-42D16.27
lung, adult.CNhs10474.28-22B114.97
lung, embryo E12.CNhs10522.354-16G213.26
lung, embryo E14.CNhs10604.404-26F814.34
lung, embryo E15.CNhs11020.432-17C514.09
lung, embryo E16.CNhs10998.458-17B615.72
lung, embryo E17.CNhs10605.480-44A612.23
lung, embryo E18.CNhs10583.1287-20I69.76
lung, neonate N00.CNhs11224.640-42C66.24
lung, neonate N06.CNhs11212.683-20E56.62
lung, neonate N07.CNhs11111.715-19A310.63
lung, neonate N10.CNhs11219.750-23E69.89
lung, neonate N20.CNhs11109.822-18A412.78
lung, neonate N25.CNhs11119.1359-25C715.37
lung, neonate N30.CNhs11133.1394-42H212.87
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A115.08
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A13.26
mammary gland, adult lactating day02.CNhs10480.595-22B66.39
mammary gland, adult pregnant day19.CNhs10476.588-5H212.42
medulla oblongata, adult.CNhs10477.17-12C225.05
medulla oblongata, neonate N30.CNhs11200.1396-42A322.50
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C77.70
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C210.86
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.99
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E27.81
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E39.05
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D714.58
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D88.24
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D911.04
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D411.33
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D59.94
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D610.28
olfactory brain, adult.CNhs10489.18-22I926.03
ovary, adult.CNhs10507.91-2I714.05
ovary, embryo E18.CNhs11040.505-44H714.78
ovary, neonate N00.CNhs11217.1299-22I414.99
oviduct, adult pregnant day01.CNhs10500.988-6G617.32
pancreas, adult.CNhs10486.34-16E45.31
pancreas, embryo E14.CNhs11012.405-44F48.74
pancreas, embryo E15.CNhs11042.1556-45F29.07
pancreas, embryo E16.CNhs11003.460-26E56.04
pancreas, embryo E17.CNhs10599.1558-45G35.91
pancreas, embryo E18.CNhs10580.1535-43I711.07
pancreas, neonate N00.CNhs11105.645-26G98.79
pancreas, neonate N01.CNhs11138.1531-43D712.72
pancreas, neonate N02.CNhs11139.1539-43D812.83
pancreas, neonate N16.CNhs11136.787-43B611.06
pancreas, neonate N25.CNhs11094.1555-45E26.33
pancreas, neonate N30.CNhs11182.1548-44H55.16
pituitary gland, adult.CNhs10493.21-1G829.28
pituitary gland, embryo E12.CNhs11018.346-16E611.52
pituitary gland, embryo E13.CNhs11009.370-44C78.15
pituitary gland, embryo E14.CNhs11037.398-44A510.07
pituitary gland, embryo E15.CNhs10592.427-16B912.06
pituitary gland, embryo E16.CNhs11036.449-43F611.77
pituitary gland, embryo E17.CNhs11039.1265-44F511.19
pituitary gland, neonate N00.CNhs11190.1308-22E98.22
placenta, adult pregnant day10.CNhs10472.539-13I76.81
placenta, adult pregnant day17.CNhs10464.577-18G38.90
prostate, adult.CNhs10470.859-1F88.16
skin, adult.CNhs10492.30-1C315.66
skin, neonate N00.CNhs11124.650-25G411.79
skin, neonate N03.CNhs11215.662-22H311.04
skin, neonate N06.CNhs11097.693-20I512.53
skin, neonate N10.CNhs11108.762-6C411.82
small intestine, neonate N16.CNhs11114.790-21I15.54
spinal cord, adult.CNhs10505.24-13C923.92
spleen, adult.CNhs10465.25-2G212.99
spleen, embryo E16.CNhs11035.461-43C113.00
spleen, embryo E18.CNhs11011.1271-21F210.37
spleen, neonate N10.CNhs11116.752-24D19.80
spleen, neonate N20.CNhs11112.824-19H110.94
spleen, neonate N25.CNhs11099.1354-25G311.90
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C632.30
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C933.73
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D333.86
stomach, adult.CNhs10503.33-1H68.59
stomach, embryo E12.CNhs10588.356-43E312.50
stomach, embryo E15.CNhs10603.1252-16G813.22
stomach, embryo E16.CNhs11022.459-17D415.88
stomach, embryo E17.CNhs11006.1035-18D514.64
stomach, embryo E18.CNhs10999.1286-20C615.94
stomach, neonate N03.CNhs11193.1340-24B813.49
stomach, neonate N07.CNhs11210.718-18A911.41
stomach, neonate N25.CNhs11104.1355-25E49.68
stomach, neonate N30.CNhs11134.1386-42I113.61
submandibular gland, adult.CNhs10469.59-29C112.43
testis, adult.CNhs10504.57-7G59.02
testis, embryo E13.CNhs11031.389-23F512.11
testis, embryo E15.CNhs11034.443-27C511.25
testis, embryo E16.CNhs11033.470-26G512.64
testis, embryo E17.CNhs11029.486-18I513.95
testis, embryo E18.CNhs11027.503-18G512.67
testis, neonate N00.CNhs11189.1300-22B714.79
testis, neonate N07.CNhs11222.726-26I417.97
testis, neonate N10.CNhs11204.763-44D918.87
testis, neonate N20.CNhs11110.839-18H313.53
testis, neonate N30.CNhs11130.1391-42E214.69
thymus, adult.CNhs10471.38-12B524.65
thymus, embryo E14.CNhs11041.402-44I413.38
thymus, embryo E15.CNhs11005.430-45I219.93
thymus, embryo E16.CNhs11002.456-26C519.88
thymus, embryo E17.CNhs10581.478-18C118.44
thymus, embryo E18.CNhs10595.1273-19G425.23
thymus, neonate N02.CNhs11181.1541-43F826.68
thymus, neonate N03.CNhs11137.2104-43C724.52
thymus, neonate N06.CNhs11197.681-26C429.58
thymus, neonate N07.CNhs11211.713-19D334.98
thymus, neonate N10.CNhs11194.748-24E431.66
thymus, neonate N20.CNhs11186.820-7A229.24
thymus, neonate N25.CNhs11125.1362-25G732.52
thymus, neonate N30.CNhs11132.1393-42G236.35
tongue, adult.CNhs10499.32-1B412.70
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H311.10
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F79.60
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G55.04
urinary bladder, adult.CNhs10481.879-12E418.55
uterus, adult pregnant day19.CNhs10497.590-15F58.07
uterus, adult.CNhs10509.92-27E513.74
vagina, adult.CNhs10502.89-27D510.93
vesicular gland, adult.CNhs10491.51-27F812.54
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A114.12
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A216.57
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A318.33
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D711.51
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A414.39
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A518.88
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A617.55
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A722.07
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A826.74
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A925.89
whole body, embryo E11.CNhs11014.324-5I88.93
whole body, embryo E12.CNhs10587.857-27C99.98
whole body, embryo E13.CNhs10512.372-23H213.32
whole body, embryo E14.5.CNhs10578.420-27D27.54
whole body, embryo E14.CNhs10519.395-14B16.92
whole body, embryo E16.CNhs10514.453-14F25.88
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G512.00
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.31
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G513.90
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G511.91
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G512.26
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G511.05
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G511.40
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G511.95
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G510.00
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G510.31
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G512.35
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G515.66
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G59.13
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G514.40
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G512.60
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G512.40
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G512.79
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G514.21
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G512.52
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G510.61
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G513.94
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G513.58
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G510.66
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G510.80
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G510.93
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G513.10
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G515.34
whole body, embryo E17.5.CNhs10513.490-9F910.03
whole body, embryo E17.CNhs10517.475-3I512.24
whole body, embryo E18.CNhs10516.493-3B312.87
whole body, neonate N00.CNhs10525.657-19C29.67
whole body, neonate N01.CNhs10576.659-23C612.63
whole body, neonate N06.CNhs10515.692-21D19.49
whole body, neonate N10.CNhs10518.761-6B411.13





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Cell type
Ontology termp-valuen
lymphocyte1.08e-0713
common lymphoid progenitor1.08e-0713
lymphoid lineage restricted progenitor cell1.77e-0712
T cell4.58e-0711
pro-T cell4.58e-0711
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