FFCP PHASE1:Mm9::chr17:86028449..86028473,+: Difference between revisions
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|id=chr17:86028449..86028473,+
|short_description=p@chr17:86028449..86028473,+
|description=CAGE_peak_at_chr17:86028449..86028473,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=492 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr17:86028449..86028473,+ | |||
|description=CAGE_peak_at_chr17:86028449..86028473,+ | |||
|id=chr17:86028449..86028473,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!4.27e-29!9;UBERON:0000019!4.27e-29!9;UBERON:0000047!4.27e-29!9;UBERON:0004088!4.27e-29!9;UBERON:0002104!4.27e-29!9;UBERON:0001456!4.27e-29!9;UBERON:0003072!4.27e-29!9;UBERON:0003071!4.27e-29!9;UBERON:0004128!4.27e-29!9;UBERON:0001444!1.62e-23!11;UBERON:0003056!1.57e-22!49;UBERON:0000020!2.02e-21!12;UBERON:0001032!2.02e-21!12;UBERON:0004456!2.02e-21!12;UBERON:0005085!1.19e-19!13;UBERON:0000033!1.34e-16!63;UBERON:0001894!1.33e-14!10;UBERON:0006222!1.33e-14!10;UBERON:0002346!2.94e-14!71;UBERON:0003075!2.94e-14!71;UBERON:0007284!2.94e-14!71;UBERON:0000007!5.87e-14!8;UBERON:0003296!5.87e-14!8;UBERON:0010133!5.87e-14!8;UBERON:0007811!4.82e-11!86;UBERON:0000153!9.52e-10!94;UBERON:0004121!1.03e-09!102;UBERON:0000924!1.03e-09!102;UBERON:0006601!1.03e-09!102;UBERON:0002780!1.08e-07!39;UBERON:0001890!1.08e-07!39;UBERON:0006240!1.08e-07!39;UBERON:0003080!1.90e-07!40 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,6.00e-44,9;UBERON:0000019,6.00e-44,9;UBERON:0000047,6.00e-44,9;UBERON:0010312,6.00e-44,9;UBERON:0004088,6.00e-44,9;UBERON:0002104,6.00e-44,9;UBERON:0001456,6.00e-44,9;UBERON:0003072,6.00e-44,9;UBERON:0004128,6.00e-44,9;UBERON:0003071,6.00e-44,9;UBERON:0001444,5.03e-36,11;UBERON:0000020,4.74e-33,12;UBERON:0001032,4.74e-33,12;UBERON:0004456,4.74e-33,12;UBERON:0000033,1.56e-30,13;UBERON:0005085,1.56e-30,13;UBERON:0003056,2.84e-14,49;UBERON:0007811,3.92e-11,36;UBERON:0002346,6.42e-11,64;UBERON:0003075,6.42e-11,64;UBERON:0007284,6.42e-11,64;UBERON:0010371,1.46e-09,73;UBERON:0000153,2.51e-09,43;UBERON:0010314,1.48e-07,92;UBERON:0004121,2.60e-07,95;UBERON:0000924,2.60e-07,95;UBERON:0006601,2.60e-07,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383381884072945,0.919218786610021,0,0,0,0,0.457438218012048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.502617408451458,0,0,0,0.162241263067758,0,0,0,0.420883711772948,1.69156575851515,0.689706313300419,0.540186389416048,2.26057226753573,2.72145996605311,4.22775276940004,1.21812241927647,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656669856316381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,1.16422815404479,0.643011105094777,0.532020700926821,1.24858172321449,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139986421625363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383381884072945,0.919218786610021,0,0,0,0,0.457438218012048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.484875253135222,0,0,0,0,0,0,0,0,0,0.502617408451458,0,0,0,0.162241263067758,0,0,0,0.420883711772948,1.69156575851515,0.689706313300419,0.540186389416048,2.26057226753573,2.72145996605311,4.22775276940004,1.21812241927647,1.29351685369508,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.656669856316381,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,1.16422815404479,0.643011105094777,0.532020700926821,1.24858172321449,0.493647061806363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0.0985044823755635,0,0,0.192906610981141,0.249810577937946,0,0,0,0,0 | ||
|short_description=p@chr17:86028449..86028473,+ | |||
}} | }} |
Latest revision as of 10:50, 5 August 2015
Short description: | p@chr17:86028449..86028473, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:86028449..86028473, + |
Coexpression cluster: | MCL_coexpression_mm9:492 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 6.00e-44 | 9 |
camera-type eye | 6.00e-44 | 9 |
simple eye | 6.00e-44 | 9 |
immature eye | 6.00e-44 | 9 |
ocular region | 6.00e-44 | 9 |
visual system | 6.00e-44 | 9 |
face | 6.00e-44 | 9 |
optic cup | 6.00e-44 | 9 |
optic vesicle | 6.00e-44 | 9 |
eye primordium | 6.00e-44 | 9 |
subdivision of head | 5.03e-36 | 11 |
sense organ | 4.74e-33 | 12 |
sensory system | 4.74e-33 | 12 |
entire sense organ system | 4.74e-33 | 12 |
head | 1.56e-30 | 13 |
ectodermal placode | 1.56e-30 | 13 |
pre-chordal neural plate | 2.84e-14 | 49 |
craniocervical region | 3.92e-11 | 36 |
neurectoderm | 6.42e-11 | 64 |
neural plate | 6.42e-11 | 64 |
presumptive neural plate | 6.42e-11 | 64 |
ecto-epithelium | 1.46e-09 | 73 |
anterior region of body | 2.51e-09 | 43 |
structure with developmental contribution from neural crest | 1.48e-07 | 92 |
ectoderm-derived structure | 2.60e-07 | 95 |
ectoderm | 2.60e-07 | 95 |
presumptive ectoderm | 2.60e-07 | 95 |