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FFCP PHASE1:Mm9::chr7:69354369..69354380,-: Difference between revisions

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{{FFCP|EntrezGene=|HGNC=|MCL_coexpression_id=399|UniProt=|association_with_transcript=35bp_to_uc009hfe.1,uc012fml.1_5end|description=CAGE_peak_2_at_uc009hfe.1_5end,CAGE_peak_2_at_uc012fml.1_5end|id=chr7:69354369..69354380,-|ontology_enrichment_celltype=CL:0000540!1.17e-08!33;CL:0000047!1.17e-08!33;CL:0000031!1.17e-08!33;CL:0000404!1.17e-08!33;CL:0000117!3.17e-07!23;CL:0000337!3.17e-07!23;CL:0000393!4.92e-07!39;CL:0000211!4.92e-07!39|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002346!6.50e-17!71;UBERON:0003075!6.50e-17!71;UBERON:0007284!6.50e-17!71;UBERON:0003056!2.21e-16!49;UBERON:0001017!3.20e-16!73;UBERON:0005743!3.20e-16!73;UBERON:0000033!7.64e-16!63;UBERON:0000073!1.72e-15!75;UBERON:0001016!1.72e-15!75;UBERON:0004121!1.06e-14!102;UBERON:0000924!1.06e-14!102;UBERON:0006601!1.06e-14!102;UBERON:0001049!1.42e-14!52;UBERON:0005068!1.42e-14!52;UBERON:0006241!1.42e-14!52;UBERON:0007135!1.42e-14!52;UBERON:0000955!4.61e-14!50;UBERON:0006238!4.61e-14!50;UBERON:0002616!1.30e-13!49;UBERON:0003080!1.54e-13!40;UBERON:0002780!4.01e-13!39;UBERON:0001890!4.01e-13!39;UBERON:0006240!4.01e-13!39;UBERON:0002020!3.57e-10!34;UBERON:0002791!1.78e-09!29;UBERON:0003528!1.78e-09!29;UBERON:0001893!1.78e-09!29;UBERON:0000153!6.93e-09!94;UBERON:0000956!3.26e-07!21;UBERON:0001869!3.26e-07!21;UBERON:0000203!3.26e-07!21;UBERON:0007811!4.05e-07!86|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.10e-15,49;UBERON:0002346,4.77e-13,64;UBERON:0003075,4.77e-13,64;UBERON:0007284,4.77e-13,64;UBERON:0000955,5.67e-13,47;UBERON:0006238,5.67e-13,47;UBERON:0001017,6.05e-13,73;UBERON:0003080,2.02e-12,40;UBERON:0004121,2.14e-12,95;UBERON:0000924,2.14e-12,95;UBERON:0006601,2.14e-12,95;UBERON:0001016,2.50e-12,75;UBERON:0002616,2.65e-12,46;UBERON:0002780,8.75e-12,39;UBERON:0001890,8.75e-12,39;UBERON:0006240,8.75e-12,39;UBERON:0000073,3.42e-11,54;UBERON:0010371,2.71e-10,73;UBERON:0001049,5.04e-10,52;UBERON:0005068,5.04e-10,52;UBERON:0006241,5.04e-10,52;UBERON:0007135,5.04e-10,52;UBERON:0003528,9.73e-09,29;UBERON:0002791,9.73e-09,29;UBERON:0001893,9.73e-09,29;UBERON:0002619,5.12e-07,17;UBERON:0010314,6.03e-07,92;UBERON:0002020,8.53e-07,34|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,1.41621522601718,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,1.34796496001021,0.810035629990144,0.630974884054146,0.571301968807607,0.883474163806454,1.5923803897944,1.24599112323707,1.83843757322004,0,1.0214987046815,1.38245879930619,1.97829431595291,1.9212405156506,1.56274011167028,0.558365998002762,0,1.06958773443767,0.294628585473668,0.569486723196412,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0,0.340860645156116,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.823120949949934,0,0,0,0,0.485300549842228,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.19832511523858,1.83000241127451,0.879580464790051,0.695297280769106,2.81287003063364,1.0389402227978,1.62241263067758,0.916554274652847,0,0,0,1.43132487258974,1.37941262660084,1.44049703844279,1.80845781402858,1.36072998302656,1.2811372028485,0.749613796477831,0.776110112217047,0,2.45837904218165,2.46331573829528,1.31517439456545,1.94633074457919,2.43776516565517,1.02891068203972,0.199034266818493,0,0,0,0,1.17263029990548,0,0.23674473558521,0.393528463494808,0.617068451549513,0,0.268273401399619,0.233530684734339,0.329119699826961,0,0,0.146199987425332,0,0,0.630869845692382,1.9551876352064,0,0,0,0.928946687441754,0.38660238396628,0.80673409849337,0.444756087689741,0,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0.913988100877831,0,0.814605311381257,0.581857461502877,0.210407459670956,0.316182685621286,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.814824882210129,1.01847051465113,1.40814148973101,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,1.44495530989013,1.99259867206745,0,0,0,0.390438744296638,1.29254038639679,0.238968797952552,1.11399337041197,0.849229592366497,0.404810701674894,1.75353514746787,1.58115111178609,1.28528526568723,0.425820255624806,0.178065603667255,0.81443479676788,0.164970122972535,0,0,0,0.377210159511796,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0.340439605753788,1.98067203434441,0.517434735131018,1.50035924522115,2.83744373827638,1.78368817602071,0.987294123612726,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0.927126510052548,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,1.26534397432454,1.82987520414164,0.86404272657441,0.209088296014469,0.436725127492355,0.134864346384821,0.247960367176008,0,0,0,0,1.49516546043979,0.66183396182839,0.583353565032143,0.774958940866387,0.506868376472335,1.29092962510329,0.651021924219751,0.524296722128554,0.241584120826006,0,0,0.608175645870493,0.410843828659309,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.76195141904306,4.58316410751517,1.03111909406213,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0.31136204275253,3.99024873401031,2.90247129782028,3.16038732188782,1.46729213839588,0.183843508450014,0.666740183404846,0.618105171716683,1.28367683836726,0.505394423527595,0.760437899670719,1.13175804831646,1.31098110457835,1.08842759088278,0.459483751644906,2.38146845641537,0.579421629724277,0.38581844092741,1.64834360321323,0.588795680537589,0.685738504770831,1.24233064311536,0.953744759789284,1.45346416632329,1.31753132581463,1.18460451048347,0.914639864363863,1.8414879800649,0.814824683075171,2.24456908663095,0.830445126869219,0.886540341380071,0.409231043169689,0.77468420592983,1.15743966588685,1.74867404556562,0.701794825336225,1.07435527024149,1.3390183244819,0.220591419119515,0.231867835620421|short_description=p2@uc009hfe.1,p2@uc012fml.1}}
{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=
|HGNC=
|MCL_coexpression_id=399
|TSSclassifier=NA
|UniProt=
|association_with_transcript=35bp_to_uc009hfe.1,uc012fml.1_5end
|cluster_id=chr7:69354369..69354380,-
|description=CAGE_peak_2_at_uc009hfe.1_5end,CAGE_peak_2_at_uc012fml.1_5end
|id=chr7:69354369..69354380,-
|ontology_enrichment_celltype=CL:0000540!1.17e-08!33;CL:0000047!1.17e-08!33;CL:0000031!1.17e-08!33;CL:0000404!1.17e-08!33;CL:0000117!3.17e-07!23;CL:0000337!3.17e-07!23;CL:0000393!4.92e-07!39;CL:0000211!4.92e-07!39
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
|ontology_enrichment_uberon=UBERON:0002346!6.50e-17!71;UBERON:0003075!6.50e-17!71;UBERON:0007284!6.50e-17!71;UBERON:0003056!2.21e-16!49;UBERON:0001017!3.20e-16!73;UBERON:0005743!3.20e-16!73;UBERON:0000033!7.64e-16!63;UBERON:0000073!1.72e-15!75;UBERON:0001016!1.72e-15!75;UBERON:0004121!1.06e-14!102;UBERON:0000924!1.06e-14!102;UBERON:0006601!1.06e-14!102;UBERON:0001049!1.42e-14!52;UBERON:0005068!1.42e-14!52;UBERON:0006241!1.42e-14!52;UBERON:0007135!1.42e-14!52;UBERON:0000955!4.61e-14!50;UBERON:0006238!4.61e-14!50;UBERON:0002616!1.30e-13!49;UBERON:0003080!1.54e-13!40;UBERON:0002780!4.01e-13!39;UBERON:0001890!4.01e-13!39;UBERON:0006240!4.01e-13!39;UBERON:0002020!3.57e-10!34;UBERON:0002791!1.78e-09!29;UBERON:0003528!1.78e-09!29;UBERON:0001893!1.78e-09!29;UBERON:0000153!6.93e-09!94;UBERON:0000956!3.26e-07!21;UBERON:0001869!3.26e-07!21;UBERON:0000203!3.26e-07!21;UBERON:0007811!4.05e-07!86
|ontology_enrichment_uberon_v019_2=UBERON:0003056,1.10e-15,49;UBERON:0002346,4.77e-13,64;UBERON:0003075,4.77e-13,64;UBERON:0007284,4.77e-13,64;UBERON:0000955,5.67e-13,47;UBERON:0006238,5.67e-13,47;UBERON:0001017,6.05e-13,73;UBERON:0003080,2.02e-12,40;UBERON:0004121,2.14e-12,95;UBERON:0000924,2.14e-12,95;UBERON:0006601,2.14e-12,95;UBERON:0001016,2.50e-12,75;UBERON:0002616,2.65e-12,46;UBERON:0002780,8.75e-12,39;UBERON:0001890,8.75e-12,39;UBERON:0006240,8.75e-12,39;UBERON:0000073,3.42e-11,54;UBERON:0010371,2.71e-10,73;UBERON:0001049,5.04e-10,52;UBERON:0005068,5.04e-10,52;UBERON:0006241,5.04e-10,52;UBERON:0007135,5.04e-10,52;UBERON:0003528,9.73e-09,29;UBERON:0002791,9.73e-09,29;UBERON:0001893,9.73e-09,29;UBERON:0002619,5.12e-07,17;UBERON:0010314,6.03e-07,92;UBERON:0002020,8.53e-07,34
|phase1_expression=0.480446541314382,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125896817975577,0.405507724878058,0,0,0,0,0,0,0,0,0,0,0,0,0.515672092277442,1.41621522601718,2.11596391708813,1.26766280701236,0,0,0,0,0,0,0,1.34796496001021,0.810035629990144,0.630974884054146,0.571301968807607,0.883474163806454,1.5923803897944,1.24599112323707,1.83843757322004,0,1.0214987046815,1.38245879930619,1.97829431595291,1.9212405156506,1.56274011167028,0.558365998002762,0,1.06958773443767,0.294628585473668,0.569486723196412,0.931997229126503,0.075726193333184,0,0,0,0,0,0,0,0,0.340860645156116,0.259786004602869,0,0.422530259330042,0,0,0,0,0,0,0,0,0.29688427812965,0.346970653532272,0.304465478312141,0.230615497256059,0.301445281105245,0.823120949949934,0,0,0,0,0.485300549842228,0,0,0,0.585561594023094,0.41889341362691,0,0,0,0,1.19832511523858,1.83000241127451,0.879580464790051,0.695297280769106,2.81287003063364,1.0389402227978,1.62241263067758,0.916554274652847,0,0,0,1.43132487258974,1.37941262660084,1.44049703844279,1.80845781402858,1.36072998302656,1.2811372028485,0.749613796477831,0.776110112217047,0,2.45837904218165,2.46331573829528,1.31517439456545,1.94633074457919,2.43776516565517,1.02891068203972,0.199034266818493,0,0,0,0,1.17263029990548,0,0.23674473558521,0.393528463494808,0.617068451549513,0,0.268273401399619,0.233530684734339,0.329119699826961,0,0,0.146199987425332,0,0,0.630869845692382,1.9551876352064,0,0,0,0.928946687441754,0.38660238396628,0.80673409849337,0.444756087689741,0,0,0.329397909448022,0,0,0,0,0,0,0.189667900953082,0.913988100877831,0,0.814605311381257,0.581857461502877,0.210407459670956,0.316182685621286,0.147610147979602,0,0,0,0.166845105716094,0.196558995113203,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.947457058852424,0.814824882210129,1.01847051465113,1.40814148973101,0.167506257441816,0.238043640886014,0.390267295715598,0.472905432318573,0.221464689648775,0,0.163863314715738,0.172684981865896,0,0,0,0,0,1.44495530989013,1.99259867206745,0,0,0,0.390438744296638,1.29254038639679,0.238968797952552,1.11399337041197,0.849229592366497,0.404810701674894,1.75353514746787,1.58115111178609,1.28528526568723,0.425820255624806,0.178065603667255,0.81443479676788,0.164970122972535,0,0,0,0.377210159511796,0.295301892880773,0.307435147943927,0,0,0,0,0,0,0.340439605753788,1.98067203434441,0.517434735131018,1.50035924522115,2.83744373827638,1.78368817602071,0.987294123612726,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0.119372344003136,0,0,0.927126510052548,0,0.206386867963223,0.370389054739423,0,0,0,0,0,0,0,1.26534397432454,1.82987520414164,0.86404272657441,0.209088296014469,0.436725127492355,0.134864346384821,0.247960367176008,0,0,0,0,1.49516546043979,0.66183396182839,0.583353565032143,0.774958940866387,0.506868376472335,1.29092962510329,0.651021924219751,0.524296722128554,0.241584120826006,0,0,0.608175645870493,0.410843828659309,0.129920822977795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.82375921308533,2.76195141904306,4.58316410751517,1.03111909406213,1.37016503954128,0.755393897389701,0.675022500231806,0.900642406448441,1.35942722695261,1.03552062350364,0.31136204275253,3.99024873401031,2.90247129782028,3.16038732188782,1.46729213839588,0.183843508450014,0.666740183404846,0.618105171716683,1.28367683836726,0.505394423527595,0.760437899670719,1.13175804831646,1.31098110457835,1.08842759088278,0.459483751644906,2.38146845641537,0.579421629724277,0.38581844092741,1.64834360321323,0.588795680537589,0.685738504770831,1.24233064311536,0.953744759789284,1.45346416632329,1.31753132581463,1.18460451048347,0.914639864363863,1.8414879800649,0.814824683075171,2.24456908663095,0.830445126869219,0.886540341380071,0.409231043169689,0.77468420592983,1.15743966588685,1.74867404556562,0.701794825336225,1.07435527024149,1.3390183244819,0.220591419119515,0.231867835620421
|short_description=p2@uc009hfe.1,p2@uc012fml.1
}}

Latest revision as of 11:48, 5 August 2015

Short description:p2@uc009hfe.1, p2@uc012fml.1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_uc009hfe.1_5end, CAGE_peak_2_at_uc012fml.1_5end
Coexpression cluster:MCL_coexpression_mm9:399
Association with transcript: 35bp_to_uc009hfe.1, uc012fml.1_5end
EntrezGene:NA
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@uc009hfe.1p2@uc012fml.1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G70.48
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I50.00
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I60.00
CD326+ enterocyte, pool1.CNhs13542.11848-124I30.00
CD326+ enterocyte, pool2.CNhs13197.11849-124I40.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I70.00
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I80.00
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E90.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E70.00
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F20.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E60.00
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F10.00
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E40.00
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E80.00
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A10.00
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A30.00
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A50.00
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A20.00
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A40.00
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A60.00
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A30.26
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H20.00
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I90.00
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D10.00
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D20.00
GP2+ M cell, pool1.CNhs13228.11845-124H90.00
GP2+ M cell, pool2.CNhs13231.11846-124I10.00
GP2+ M cell, pool3.CNhs13240.11847-124I20.00
Ileum epithelium, pool1.CNhs13199.10252-104B90.00
Ileum epithelium, pool2.CNhs13232.10253-104C10.00
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C80.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I30.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G60.00
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E90.00
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F50.00
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F60.00
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F70.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G80.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H10.00
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H30.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G90.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H20.00
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H40.00
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D80.13
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D90.41
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B30.00
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B70.00
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C20.00
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B80.00
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C30.00
Mouse Astrocytes, donor2.CNhs12078.11552-120C40.00
Mouse Astrocytes, donor3.CNhs12107.11633-122C40.00
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A20.00
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I90.00
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A10.00
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C10.00
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E10.00
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C50.52
Mouse Granule cells, donor1.CNhs12131.11713-123C31.42
Mouse Granule cells, donor2.CNhs12357.11731-123E32.12
Mouse Granule cells, donor3.CNhs12108.11636-122C71.27
Mouse Meningeal cells, donor1.CNhs12132.11716-123C60.00
Mouse Meningeal cells, donor3.CNhs12109.11639-122D10.00
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E70.00
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D20.00
Mouse Microglia, donor1.CNhs12629.11718-123C80.00
Mouse Microglia, donor2.CNhs12634.11736-123E80.00
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D51.35
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F50.81
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D90.63
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F10.57
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D50.88
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D21.59
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F21.25
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D61.84
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D30.00
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F31.02
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D71.38
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D41.98
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F41.92
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D81.56
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E40.56
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E50.00
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I61.07
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D60.29
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F60.57
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E10.93
Mouse Schwann, donor1.CNhs12507.11728-123D90.08
Mouse Schwann, donor2.CNhs12573.11746-123F90.00
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G30.00
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F70.00
Mouse hepatocyte, donor1.CNhs13078.11714-123C40.00
Mouse hepatocyte, donor3.CNhs12615.11637-122C80.00
Mouse hepatocyte, donor6.CNhs13090.11822-124F40.00
Mouse hepatocyte, donor8.CNhs13091.11824-124F60.00
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A70.00
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I70.34
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E30.26
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I80.00
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G60.42
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H10.00
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I80.00
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G10.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G20.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G30.00
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B60.00
accessory axillary lymph node, adult.CNhs10475.1063-29H90.00
adrenal gland, adult.CNhs10508.49-24D70.30
adrenal gland, embryo E14.CNhs11038.406-44C50.35
adrenal gland, embryo E16.CNhs11004.1254-43D60.30
adrenal gland, embryo E17.CNhs11043.1263-45I10.23
adrenal gland, embryo E18.CNhs11026.1262-18F50.30
adrenal gland, neonate N00.CNhs11191.1311-23C10.82
adrenal gland, neonate N25.CNhs11223.1377-27I30.00
amnion, adult pregnant day17.5.CNhs10488.583-22A80.00
aorta, adult.CNhs10498.46-23H10.00
bone (os femoris), adult.CNhs10483.56-12G20.00
bone (os femoris), neonate N02.CNhs11227.1985-43F50.49
bone (os femoris), neonate N16.CNhs11225.1525-43A60.00
bone (os femoris), neonate N20.CNhs11195.1350-25C30.00
cecum, adult.CNhs10467.37-13H40.00
cerebellum, adult.CNhs10494.15-8B20.59
cerebellum, neonate N30.CNhs11135.1395-42I20.42
colon, adult.CNhs10468.36-18H70.00
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C70.00
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.00
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D40.00
corpora quadrigemina, adult.CNhs10501.16-22A41.20
corpus striatum, adult.CNhs10487.19-21D81.83
corpus striatum, neonate N00.CNhs11226.630-43F10.88
cortex, adult.CNhs10473.12-14D50.70
cortex, neonate N30.CNhs11107.1392-42F22.81
diencephalon, adult.CNhs10482.20-12F21.04
diencephalon, neonate N30.CNhs11201.1388-42B21.62
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B10.92
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A20.00
epididymis, adult.CNhs10490.58-23B20.00
eyeball, adult.CNhs10484.31-12G40.00
eyeball, embryo E12.CNhs11016.345-16C61.43
eyeball, embryo E14.CNhs10521.399-16E21.38
eyeball, embryo E15.CNhs10593.426-16C91.44
eyeball, embryo E17.CNhs11023.1261-18D41.81
eyeball, neonate N00.CNhs11207.633-15C61.36
eyeball, neonate N01.CNhs11140.1532-43E71.28
eyeball, neonate N02.CNhs11205.1551-44G80.75
eyeball, neonate N16.CNhs11188.777-19A20.78
forelimb, embryo E11.CNhs10596.335-25E20.00
forelimb, embryo E12.CNhs10600.359-14H22.46
forelimb, embryo E13.CNhs10589.384-1E22.46
forelimb, embryo E14.CNhs10577.413-26A81.32
forelimb, embryo E15.CNhs11007.437-20E71.95
forelimb, embryo E17.CNhs10598.1517-43C42.44
forelimb, embryo E18.CNhs11008.1520-43B51.03
gonad, embryo E13.CNhs11044.1564-45I60.20
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C80.00
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D20.00
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D50.00
heart, embryo E11.CNhs10586.331-24E90.00
heart, embryo E12.CNhs11015.353-12F51.17
heart, embryo E13.CNhs11013.376-3I90.00
heart, embryo E14.CNhs10597.403-26D40.24
heart, embryo E15.CNhs11017.431-16C80.39
heart, embryo E16.CNhs11021.457-17C60.62
heart, embryo E17.CNhs11025.479-18E50.00
heart, embryo E18.CNhs11030.1283-20G30.27
heart, neonate N00.CNhs11213.639-21E30.23
heart, neonate N03.CNhs11221.1349-25I20.33
heart, neonate N10.CNhs11118.749-24G10.00
heart, neonate N16.CNhs11209.782-15G10.00
heart, neonate N20.CNhs11127.821-26I60.15
heart, neonate N25.CNhs11196.1351-25D30.00
heart, neonate N30.CNhs11202.1390-42D20.00
hippocampus, adult.CNhs10478.13-16E80.63
hippocampus, neonate N00.CNhs11228.627-43G11.96
intestinal mucosa, adult.CNhs10506.860-29I30.00
intestine, adult.CNhs10496.178-9A30.00
intestine, embryo E12.CNhs11019.1251-16I50.00
intestine, embryo E13.CNhs11010.381-16D50.93
intestine, embryo E15.CNhs10602.976-16D80.39
intestine, embryo E16.CNhs10585.463-22H40.81
intestine, embryo E17.CNhs10582.482-18D30.44
intestine, embryo E18.CNhs10526.1289-20F70.00
intestine, neonate N00.CNhs11126.644-26D10.00
intestine, neonate N01.CNhs11192.1322-23E90.33
intestine, neonate N06.CNhs11102.688-20B80.00
intestine, neonate N07.CNhs11095.720-20F20.00
intestine, neonate N10.CNhs11098.755-23A50.00
intestine, neonate N20.CNhs11187.827-18D10.00
intestine, neonate N25.CNhs11121.1352-25E30.00
intestine, neonate N30.CNhs11131.1384-42G10.00
kidney, embryo E14.CNhs10606.411-4I90.19
kidney, embryo E15.CNhs10997.434-16F80.91
kidney, embryo E16.CNhs10584.464-22A50.00
kidney, embryo E17.CNhs11028.483-18I20.81
kidney, embryo E18.CNhs11001.1288-20C70.58
kidney, neonate N00.CNhs11214.646-21G70.21
kidney, neonate N10.CNhs11206.758-6D50.32
kidney, neonate N20.CNhs11113.832-19I10.15
kidney, neonate N25.CNhs11122.1353-25F30.00
kidney, neonate N30.CNhs11203.1385-42H10.00
liver, adult pregnant day01.CNhs10466.508-5B20.00
liver, embryo E12.CNhs10601.355-15F80.17
liver, embryo E13.CNhs10524.378-3H60.20
liver, embryo E14.CNhs10594.409-16E10.00
liver, embryo E15.CNhs10520.433-16D70.00
liver, embryo E16.CNhs10523.462-17F50.00
liver, embryo E17.CNhs10510.481-18A30.00
liver, embryo E18.CNhs10579.499-43G40.00
liver, neonate N00.CNhs11117.641-24F40.00
liver, neonate N03.CNhs11123.1345-25G20.00
liver, neonate N06.CNhs11101.684-20A80.00
liver, neonate N07.CNhs11103.716-20H20.00
liver, neonate N10.CNhs11115.751-24B90.00
liver, neonate N20.CNhs11220.823-25A30.00
liver, neonate N25.CNhs11198.1368-26H10.00
liver, neonate N30.CNhs11106.1382-42D10.00
lung, adult.CNhs10474.28-22B10.00
lung, embryo E12.CNhs10522.354-16G20.95
lung, embryo E14.CNhs10604.404-26F80.81
lung, embryo E15.CNhs11020.432-17C51.02
lung, embryo E16.CNhs10998.458-17B61.41
lung, embryo E17.CNhs10605.480-44A60.17
lung, embryo E18.CNhs10583.1287-20I60.24
lung, neonate N00.CNhs11224.640-42C60.39
lung, neonate N06.CNhs11212.683-20E50.47
lung, neonate N07.CNhs11111.715-19A30.22
lung, neonate N10.CNhs11219.750-23E60.00
lung, neonate N20.CNhs11109.822-18A40.16
lung, neonate N25.CNhs11119.1359-25C70.17
lung, neonate N30.CNhs11133.1394-42H20.00
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A10.00
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A10.00
mammary gland, adult lactating day02.CNhs10480.595-22B60.00
mammary gland, adult pregnant day19.CNhs10476.588-5H20.00
medulla oblongata, adult.CNhs10477.17-12C21.44
medulla oblongata, neonate N30.CNhs11200.1396-42A31.99
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C70.00
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C20.00
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E10.00
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E20.39
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E31.29
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D70.24
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D81.11
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D90.85
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D40.40
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D51.75
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D61.58
olfactory brain, adult.CNhs10489.18-22I91.29
ovary, adult.CNhs10507.91-2I70.43
ovary, embryo E18.CNhs11040.505-44H70.18
ovary, neonate N00.CNhs11217.1299-22I40.81
oviduct, adult pregnant day01.CNhs10500.988-6G60.16
pancreas, adult.CNhs10486.34-16E40.00
pancreas, embryo E14.CNhs11012.405-44F40.00
pancreas, embryo E15.CNhs11042.1556-45F20.00
pancreas, embryo E16.CNhs11003.460-26E50.38
pancreas, embryo E17.CNhs10599.1558-45G30.30
pancreas, embryo E18.CNhs10580.1535-43I70.31
pancreas, neonate N00.CNhs11105.645-26G90.00
pancreas, neonate N01.CNhs11138.1531-43D70.00
pancreas, neonate N02.CNhs11139.1539-43D80.00
pancreas, neonate N16.CNhs11136.787-43B60.00
pancreas, neonate N25.CNhs11094.1555-45E20.00
pancreas, neonate N30.CNhs11182.1548-44H50.00
pituitary gland, adult.CNhs10493.21-1G80.34
pituitary gland, embryo E12.CNhs11018.346-16E61.98
pituitary gland, embryo E13.CNhs11009.370-44C70.52
pituitary gland, embryo E14.CNhs11037.398-44A51.50
pituitary gland, embryo E15.CNhs10592.427-16B92.84
pituitary gland, embryo E16.CNhs11036.449-43F61.78
pituitary gland, embryo E17.CNhs11039.1265-44F50.99
pituitary gland, neonate N00.CNhs11190.1308-22E90.30
placenta, adult pregnant day10.CNhs10472.539-13I70.00
placenta, adult pregnant day17.CNhs10464.577-18G30.00
prostate, adult.CNhs10470.859-1F80.00
skin, adult.CNhs10492.30-1C30.00
skin, neonate N00.CNhs11124.650-25G40.16
skin, neonate N03.CNhs11215.662-22H30.06
skin, neonate N06.CNhs11097.693-20I50.12
skin, neonate N10.CNhs11108.762-6C40.00
small intestine, neonate N16.CNhs11114.790-21I10.00
spinal cord, adult.CNhs10505.24-13C90.93
spleen, adult.CNhs10465.25-2G20.00
spleen, embryo E16.CNhs11035.461-43C10.21
spleen, embryo E18.CNhs11011.1271-21F20.37
spleen, neonate N10.CNhs11116.752-24D10.00
spleen, neonate N20.CNhs11112.824-19H10.00
spleen, neonate N25.CNhs11099.1354-25G30.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C60.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C90.00
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D30.00
stomach, adult.CNhs10503.33-1H60.00
stomach, embryo E12.CNhs10588.356-43E31.27
stomach, embryo E15.CNhs10603.1252-16G81.83
stomach, embryo E16.CNhs11022.459-17D40.86
stomach, embryo E17.CNhs11006.1035-18D50.21
stomach, embryo E18.CNhs10999.1286-20C60.44
stomach, neonate N03.CNhs11193.1340-24B80.13
stomach, neonate N07.CNhs11210.718-18A90.25
stomach, neonate N25.CNhs11104.1355-25E40.00
stomach, neonate N30.CNhs11134.1386-42I10.00
submandibular gland, adult.CNhs10469.59-29C10.00
testis, adult.CNhs10504.57-7G50.00
testis, embryo E13.CNhs11031.389-23F51.50
testis, embryo E15.CNhs11034.443-27C50.66
testis, embryo E16.CNhs11033.470-26G50.58
testis, embryo E17.CNhs11029.486-18I50.77
testis, embryo E18.CNhs11027.503-18G50.51
testis, neonate N00.CNhs11189.1300-22B71.29
testis, neonate N07.CNhs11222.726-26I40.65
testis, neonate N10.CNhs11204.763-44D90.52
testis, neonate N20.CNhs11110.839-18H30.24
testis, neonate N30.CNhs11130.1391-42E20.00
thymus, adult.CNhs10471.38-12B50.00
thymus, embryo E14.CNhs11041.402-44I40.61
thymus, embryo E15.CNhs11005.430-45I20.41
thymus, embryo E16.CNhs11002.456-26C50.13
thymus, embryo E17.CNhs10581.478-18C10.00
thymus, embryo E18.CNhs10595.1273-19G40.00
thymus, neonate N02.CNhs11181.1541-43F80.00
thymus, neonate N03.CNhs11137.2104-43C70.00
thymus, neonate N06.CNhs11197.681-26C40.00
thymus, neonate N07.CNhs11211.713-19D30.00
thymus, neonate N10.CNhs11194.748-24E40.00
thymus, neonate N20.CNhs11186.820-7A20.00
thymus, neonate N25.CNhs11125.1362-25G70.00
thymus, neonate N30.CNhs11132.1393-42G20.00
tongue, adult.CNhs10499.32-1B40.00
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H30.00
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F70.00
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G50.00
urinary bladder, adult.CNhs10481.879-12E40.00
uterus, adult pregnant day19.CNhs10497.590-15F50.00
uterus, adult.CNhs10509.92-27E50.00
vagina, adult.CNhs10502.89-27D50.00
vesicular gland, adult.CNhs10491.51-27F80.00
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A12.82
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A22.76
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A34.58
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D71.03
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A41.37
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A50.76
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A60.68
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A70.90
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A81.36
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A91.04
whole body, embryo E11.CNhs11014.324-5I80.31
whole body, embryo E12.CNhs10587.857-27C93.99
whole body, embryo E13.CNhs10512.372-23H22.90
whole body, embryo E14.5.CNhs10578.420-27D23.16
whole body, embryo E14.CNhs10519.395-14B11.47
whole body, embryo E16.CNhs10514.453-14F20.18
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G50.67
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G50.62
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G51.28
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G50.51
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G50.76
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G51.13
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G51.31
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G51.09
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G50.46
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G52.38
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G50.58
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G50.39
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G51.65
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G50.59
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G50.69
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G51.24
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G50.95
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G51.45
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G51.32
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G51.18
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G50.91
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G51.84
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G50.81
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G52.24
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G50.83
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G50.89
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G50.41
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G50.77
whole body, embryo E17.5.CNhs10513.490-9F91.16
whole body, embryo E17.CNhs10517.475-3I51.75
whole body, embryo E18.CNhs10516.493-3B30.70
whole body, neonate N00.CNhs10525.657-19C21.07
whole body, neonate N01.CNhs10576.659-23C61.34
whole body, neonate N06.CNhs10515.692-21D10.22
whole body, neonate N10.CNhs10518.761-6B40.23





  • Click each plot point to find sample in table


Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
pre-chordal neural plate1.10e-1549
neurectoderm4.77e-1364
neural plate4.77e-1364
presumptive neural plate4.77e-1364
brain5.67e-1347
future brain5.67e-1347
central nervous system6.05e-1373
anterior neural tube2.02e-1240
ectoderm-derived structure2.14e-1295
ectoderm2.14e-1295
presumptive ectoderm2.14e-1295
nervous system2.50e-1275
regional part of brain2.65e-1246
regional part of forebrain8.75e-1239
forebrain8.75e-1239
future forebrain8.75e-1239
regional part of nervous system3.42e-1154
ecto-epithelium2.71e-1073
neural tube5.04e-1052
neural rod5.04e-1052
future spinal cord5.04e-1052
neural keel5.04e-1052
brain grey matter9.73e-0929
regional part of telencephalon9.73e-0929
telencephalon9.73e-0929
regional part of cerebral cortex5.12e-0717
structure with developmental contribution from neural crest6.03e-0792
gray matter8.53e-0734
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