FFCP PHASE1:Mm9::chr8:102187902..102187909,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(4 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene= | |EntrezGene= | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=550 | |||
|TSSclassifier=NA | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-9bp_to_ENSMUST00000118240_5end | |association_with_transcript=-9bp_to_ENSMUST00000118240_5end | ||
|cluster_id=chr8:102187902..102187909,+ | |||
|description=CAGE_peak_2_at_ENSMUST00000118240_5end | |description=CAGE_peak_2_at_ENSMUST00000118240_5end | ||
|id=chr8:102187902..102187909,+ | |id=chr8:102187902..102187909,+ | ||
|ontology_enrichment_celltype=CL:0000239!1.91e-31!6;CL:0000677!1.91e-31!6;CL:0000212!1.91e-31!6;CL:0000584!1.91e-31!6;CL:0000075!6.43e-27!7;CL:0002563!7.15e-21!9;CL:0002251!7.15e-21!9;CL:0000473!2.78e-16!3;CL:0000627!2.78e-16!3;CL:0000682!2.78e-16!3;CL:0000066!5.37e-16!25;CL:0002076!2.22e-12!15;CL:0000223!3.51e-09!20 | |ontology_enrichment_celltype=CL:0000239!1.91e-31!6;CL:0000677!1.91e-31!6;CL:0000212!1.91e-31!6;CL:0000584!1.91e-31!6;CL:0000075!6.43e-27!7;CL:0002563!7.15e-21!9;CL:0002251!7.15e-21!9;CL:0000473!2.78e-16!3;CL:0000627!2.78e-16!3;CL:0000682!2.78e-16!3;CL:0000066!5.37e-16!25;CL:0002076!2.22e-12!15;CL:0000223!3.51e-09!20 | ||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.79e-15,6;CL:0000677,1.79e-15,6;CL:0000584,1.79e-15,6;CL:0000682,1.20e-13,3;CL:0000075,2.31e-13,7;CL:0002563,1.54e-10,9;CL:0002251,1.54e-10,9;CL:0000066,6.72e-10,25 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!1.64e-41!15;UBERON:0001242!8.36e-32!13;UBERON:0000060!8.36e-32!13;UBERON:0001262!8.36e-32!13;UBERON:0004786!8.36e-32!13;UBERON:0004923!1.99e-25!24;UBERON:0003350!7.15e-21!9;UBERON:0004808!7.15e-21!9;UBERON:0001277!7.15e-21!9;UBERON:0000485!5.11e-17!11;UBERON:0000160!9.99e-16!43;UBERON:0001962!3.84e-12!2;UBERON:0001961!3.84e-12!2;UBERON:0001744!3.84e-12!2;UBERON:0005409!5.25e-11!59;UBERON:0002465!2.23e-08!3;UBERON:0000331!4.62e-08!3;UBERON:0002116!4.62e-08!3;UBERON:0001204!4.62e-08!3;UBERON:0001168!4.62e-08!3;UBERON:0003199!6.50e-07!1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,8.29e-32,15;UBERON:0001962,6.43e-21,2;UBERON:0001961,6.43e-21,2;UBERON:0001744,6.43e-21,2;UBERON:0004923,6.92e-20,24;UBERON:0001242,6.77e-19,13;UBERON:0001262,6.77e-19,13;UBERON:0004786,6.77e-19,13;UBERON:0002465,2.70e-14,3;UBERON:0000331,1.04e-13,3;UBERON:0002116,1.04e-13,3;UBERON:0001204,1.04e-13,3;UBERON:0001168,1.04e-13,3;UBERON:0003199,2.31e-11,1;UBERON:0003350,1.54e-10,9;UBERON:0004808,1.54e-10,9;UBERON:0001277,1.54e-10,9;UBERON:0002108,1.58e-10,4;UBERON:0000485,9.84e-09,11;UBERON:0000160,5.10e-08,31 | |||
|phase1_expression=0,0.697950815278722,1.36499771816861,8.16653370528441,12.0214975187123,0.503637815735669,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.5995453676044,10.0940083669555,1.14846392823004,1.29228598847722,0.646413698057667,2.66032787238923,1.00812051903972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.697950815278722,1.36499771816861,8.16653370528441,12.0214975187123,0.503637815735669,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.5995453676044,10.0940083669555,1.14846392823004,1.29228598847722,0.646413698057667,2.66032787238923,1.00812051903972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.660837565967596,0,0,0,0,0,0,0,0,0.164698954724011,0.251335208800269,0,0,0,0,0.398282546508734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@ENSMUST00000118240 | |short_description=p2@ENSMUST00000118240 | ||
}} | }} |
Latest revision as of 18:55, 5 August 2015
Short description: | p2@ENSMUST00000118240 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_ENSMUST00000118240_5end |
Coexpression cluster: | MCL_coexpression_mm9:550 |
Association with transcript: | -9bp_to_ENSMUST00000118240_5end |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.79e-15 | 6 |
gut absorptive cell | 1.79e-15 | 6 |
enterocyte | 1.79e-15 | 6 |
M cell of gut | 1.20e-13 | 3 |
columnar/cuboidal epithelial cell | 2.31e-13 | 7 |
intestinal epithelial cell | 1.54e-10 | 9 |
epithelial cell of alimentary canal | 1.54e-10 | 9 |
epithelial cell | 6.72e-10 | 25 |
Ontology term | p-value | n |
---|---|---|
mucosa | 8.29e-32 | 15 |
gut-associated lymphoid tissue | 6.43e-21 | 2 |
mucosa-associated lymphoid tissue | 6.43e-21 | 2 |
lymphoid tissue | 6.43e-21 | 2 |
organ component layer | 6.92e-20 | 24 |
intestinal mucosa | 6.77e-19 | 13 |
wall of intestine | 6.77e-19 | 13 |
gastrointestinal system mucosa | 6.77e-19 | 13 |
lymphoid system | 2.70e-14 | 3 |
ileal mucosa | 1.04e-13 | 3 |
ileum | 1.04e-13 | 3 |
mucosa of small intestine | 1.04e-13 | 3 |
wall of small intestine | 1.04e-13 | 3 |
egg chamber | 2.31e-11 | 1 |
epithelium of mucosa | 1.54e-10 | 9 |
gastrointestinal system epithelium | 1.54e-10 | 9 |
intestinal epithelium | 1.54e-10 | 9 |
small intestine | 1.58e-10 | 4 |
simple columnar epithelium | 9.84e-09 | 11 |
intestine | 5.10e-08 | 31 |