FFCP PHASE1:Mm9::chr11:45567111..45567116,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=204 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr11:45567111..45567116,- | |||
|description=CAGE_peak_at_chr11:45567111..45567116,- | |description=CAGE_peak_at_chr11:45567111..45567116,- | ||
|id=chr11:45567111..45567116,- | |id=chr11:45567111..45567116,- | ||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000878,1.73e-30,2;CL:0000129,1.73e-30,2;CL:0002453,2.48e-17,8;CL:0002194,8.06e-16,4;CL:0000766,8.06e-16,4;CL:0000234,8.06e-16,4;CL:0000576,8.06e-16,4;CL:0000235,8.06e-16,4;CL:0000864,8.06e-16,4;CL:0002009,8.06e-16,4;CL:0000040,8.06e-16,4;CL:0000559,8.06e-16,4;CL:0000333,4.97e-14,10;CL:0000095,4.97e-14,10;CL:0000243,4.97e-14,10;CL:0000123,4.97e-14,10;CL:0000125,4.97e-14,10;CL:0000030,4.97e-14,10;CL:0000339,4.97e-14,10;CL:0000473,1.78e-09,7;CL:0000557,1.78e-09,7;CL:0002605,1.29e-08,2;CL:0002604,1.29e-08,2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002048!9.70e-12!14;UBERON:0000117!9.70e-12!14;UBERON:0000171!9.70e-12!14;UBERON:0000170!9.70e-12!14;UBERON:0005597!9.70e-12!14;UBERON:0000118!9.70e-12!14;UBERON:0005153!3.23e-09!17;UBERON:0005178!3.23e-09!17;UBERON:0005181!3.23e-09!17;UBERON:0002224!3.23e-09!17;UBERON:0000915!3.23e-09!17;UBERON:0008947!3.23e-09!17;UBERON:0003258!3.23e-09!17 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002048,5.83e-10,14;UBERON:0000117,5.83e-10,14;UBERON:0000171,5.83e-10,14;UBERON:0000170,5.83e-10,14;UBERON:0005597,5.83e-10,14;UBERON:0000118,5.83e-10,14;UBERON:0005153,2.50e-08,17;UBERON:0005178,2.50e-08,17;UBERON:0005181,2.50e-08,17;UBERON:0002224,2.50e-08,17;UBERON:0000915,2.50e-08,17;UBERON:0008947,2.50e-08,17;UBERON:0003258,2.50e-08,17;UBERON:0005157,3.53e-07,20 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,2.13872888981712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39680088414724,18.4424786554346,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.324482526135515,0,0,0.252722758433675,0,0,0,0,0,0,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0.351902248327898,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.610953983535943,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,1.00503754465089,0.952174563544055,0.585400943573396,0.315270288212382,0.44292937929755,0.318909537314974,0.327726629431476,1.03610989119537,1.15719246865209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0.169978429993855,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166234645358492,0,0,0,0,0,0,0,0,0,0,0,0.436050312760893,0,2.13872888981712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.39680088414724,18.4424786554346,0,0,0,0,0.220868540951614,0,0,0,0,0,0,0,0,0,0,0.56276261003168,0.15279824777681,0,0.427115042397309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11981512450592,0,0,0,0,0.125654352112864,0.173824320192276,0,0.20778804455956,0.324482526135515,0,0,0.252722758433675,0,0,0,0,0,0,0.12811372028485,0,0,0.215567992932842,0.189106080167819,0.351902248327898,0,0,0,0,0.199034266818493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.720332286654991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.610953983535943,0,0.210407459670956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.554259570499814,0,0,0,0,1.00503754465089,0.952174563544055,0.585400943573396,0.315270288212382,0.44292937929755,0.318909537314974,0.327726629431476,1.03610989119537,1.15719246865209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18542530201051,0,0,0,0,0,0,0.169978429993855,0.419854356970974,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.168956125490778,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0.100966449948148,0,0,0.0974578807397524,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252697211763798,0,0,0.0936415074698824,0.192075457214608,0.0574354689556133,0,0.115884325944855,0,0,0,0,0.177475806159338,0,0.145346416632329,0.0941093804153306,0.169229215783353,0.182927972872773,0.263069711437843,0.135804113845862,0,0.118635018124174,0.29551344712669,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr11:45567111..45567116,- | |short_description=p@chr11:45567111..45567116,- | ||
}} | }} |
Latest revision as of 22:33, 5 August 2015
Short description: | p@chr11:45567111..45567116, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr11:45567111..45567116, - |
Coexpression cluster: | MCL_coexpression_mm9:204 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
central nervous system macrophage | 1.73e-30 | 2 |
microglial cell | 1.73e-30 | 2 |
oligodendrocyte precursor cell | 2.48e-17 | 8 |
monopoietic cell | 8.06e-16 | 4 |
myeloid leukocyte | 8.06e-16 | 4 |
phagocyte | 8.06e-16 | 4 |
monocyte | 8.06e-16 | 4 |
macrophage | 8.06e-16 | 4 |
tissue-resident macrophage | 8.06e-16 | 4 |
macrophage dendritic cell progenitor | 8.06e-16 | 4 |
monoblast | 8.06e-16 | 4 |
promonocyte | 8.06e-16 | 4 |
migratory neural crest cell | 4.97e-14 | 10 |
neuron associated cell | 4.97e-14 | 10 |
glial cell (sensu Vertebrata) | 4.97e-14 | 10 |
neuron associated cell (sensu Vertebrata) | 4.97e-14 | 10 |
glial cell | 4.97e-14 | 10 |
glioblast | 4.97e-14 | 10 |
glioblast (sensu Vertebrata) | 4.97e-14 | 10 |
defensive cell | 1.78e-09 | 7 |
granulocyte monocyte progenitor cell | 1.78e-09 | 7 |
astrocyte of the cerebral cortex | 1.29e-08 | 2 |
astrocyte of the hippocampus | 1.29e-08 | 2 |
Ontology term | p-value | n |
---|---|---|
lung | 5.83e-10 | 14 |
respiratory tube | 5.83e-10 | 14 |
respiration organ | 5.83e-10 | 14 |
pair of lungs | 5.83e-10 | 14 |
lung primordium | 5.83e-10 | 14 |
lung bud | 5.83e-10 | 14 |
epithelial bud | 2.50e-08 | 17 |
thoracic cavity element | 2.50e-08 | 17 |
thoracic segment organ | 2.50e-08 | 17 |
thoracic cavity | 2.50e-08 | 17 |
thoracic segment of trunk | 2.50e-08 | 17 |
respiratory primordium | 2.50e-08 | 17 |
endoderm of foregut | 2.50e-08 | 17 |
epithelial fold | 3.53e-07 | 20 |