FFCP PHASE1:Mm9::chr13:55629923..55629941,-: Difference between revisions
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{{FFCP|EntrezGene=27261|HGNC=|MCL_coexpression_id=3|UniProt=Q3T9H7|association_with_transcript=-6bp_to_uc007qrn.1_5end|description=CAGE_peak_2_at_Dok3_5end|id=chr13:55629923..55629941,-|ontology_enrichment_celltype=CL:0000049!1.75e-09!19;CL:0000763!5.94e-09!16;CL:0000557!3.56e-07!7;CL:0000839!8.29e-07!13|ontology_enrichment_celltype_v019_2=CL:0000763,3.37e-18,16;CL:0000049,7.53e-18,19;CL:0000988,1.53e-15,32;CL:0002032,1.53e-15,32;CL:0000037,1.53e-15,32;CL:0000837,1.53e-15,32;CL:0000839,2.18e-15,13;CL:0002320,5.38e-15,46;CL:0000134,5.38e-15,46;CL:0000557,3.37e-13,7;CL:0002031,4.14e-13,25;CL:0000219,3.52e-12,54;CL:0000553,3.58e-11,6;CL:0000556,3.58e-11,6;CL:0002194,4.77e-11,4;CL:0000766,4.77e-11,4;CL:0000234,4.77e-11,4;CL:0000576,4.77e-11,4;CL:0000235,4.77e-11,4;CL:0000864,4.77e-11,4;CL:0002009,4.77e-11,4;CL:0000040,4.77e-11,4;CL:0000559,4.77e-11,4;CL:0002092,5.35e-09,3;CL:0002540,5.35e-09,3;CL:0000723,1.18e-08,91;CL:0000048,1.18e-08,91;CL:0000034,7.78e-08,97;CL:0000050,2.45e-07,9;CL:0000738,7.67e-07,17;CL:0002087,7.67e-07,17|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0060100,1.03e-09,3;DOID:4045,1.03e-09,3|ontology_enrichment_uberon=UBERON:0002204!4.36e-16!32;UBERON:0001474!2.66e-15!22;UBERON:0004765!2.66e-15!22;UBERON:0001434!2.66e-15!22;UBERON:0002371!6.44e-15!16;UBERON:0002405!3.29e-09!70;UBERON:0002193!2.45e-08!48;UBERON:0002390!9.13e-07!45;UBERON:0003061!9.13e-07!45|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.72e-30,16;UBERON:0001474,2.44e-24,22;UBERON:0004765,2.44e-24,22;UBERON:0001434,2.44e-24,22;UBERON:0002204,6.73e-24,32;UBERON:0002193,1.07e-19,48;UBERON:0002405,1.07e-19,48;UBERON:0002390,2.08e-15,45;UBERON:0003061,2.08e-15,45;UBERON:0002384,5.38e-15,46;UBERON:0002465,1.30e-07,3;UBERON:0002106,3.59e-07,6;UBERON:0004457,3.59e-07,6;UBERON:0000042,3.59e-07,6;UBERON:0004854,3.59e-07,6;UBERON:0009034,3.59e-07,6;UBERON:0002095,3.59e-07,6;UBERON:0004782,3.59e-07,6;UBERON:0003281,3.59e-07,6;UBERON:0009664,3.59e-07,6;UBERON:0002296,3.59e-07,6;UBERON:0005602,3.59e-07,6;UBERON:0001179,3.59e-07,6;UBERON:0006293,3.59e-07,6;UBERON:0003081,5.96e-07,87|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.999329285446988,1.01237633694913,1.39912375625629,6.94016763788123,6.30726394586398,5.09267582157636,0.425216450755349,1.88652807281682,1.30599894569468,1.11994695955385,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,17.5783284909501,7.813353445238,12.5645698553712,21.7645650571475,22.5405010036287,22.3334762394331,0,0,0,0.782391344348039,0,0,0,0,0,5.5368259999053,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,4.94944844504769,4.94433181283487,2.1314403448383,2.09720077362883,1.53687322128622,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.03575153458869,0,0.173485326766136,0,0,0.60289056221049,0.352766121407114,0,0.247194967734374,0.289198713839823,0.884610551949874,0.970601099684455,1.32504911076236,0.484875253135222,0,0,0.209446706813455,0,0.599075622529601,0,1.52484272487678,0.149790639404823,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,2.84163499395593,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0.502670417600539,0,0,0.898819408654221,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,0.482354319504834,0,0.863088412352432,1.13494658742525,0,0,2.23284568601102,0.312037673114561,0,0,0.482443521363367,0.739012760666419,0,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.655453258862952,0.863424909329478,0.433947175744535,3.01582567878545,3.80733978673097,0.491764273019036,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0.220528398054962,0,0,0,0.119372344003136,0,0.291480836629851,0,3.07567585436135,0.412773735926445,1.85194527369712,0.376736914009382,1.50363650493128,1.83022538565218,0.339956859987711,0.419854356970974,0,0,0,0.203319467126849,0,0.209088296014469,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0,0,0,0.367687016900028,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843|short_description=p2@Dok3}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:27261 | |||
|HGNC= | |||
|MCL_coexpression_id=3 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3T9H7 | |||
|association_with_transcript=-6bp_to_uc007qrn.1_5end | |||
|cluster_id=chr13:55629923..55629941,- | |||
|description=CAGE_peak_2_at_Dok3_5end | |||
|id=chr13:55629923..55629941,- | |||
|ontology_enrichment_celltype=CL:0000049!1.75e-09!19;CL:0000763!5.94e-09!16;CL:0000557!3.56e-07!7;CL:0000839!8.29e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.37e-18,16;CL:0000049,7.53e-18,19;CL:0000988,1.53e-15,32;CL:0002032,1.53e-15,32;CL:0000037,1.53e-15,32;CL:0000837,1.53e-15,32;CL:0000839,2.18e-15,13;CL:0002320,5.38e-15,46;CL:0000134,5.38e-15,46;CL:0000557,3.37e-13,7;CL:0002031,4.14e-13,25;CL:0000219,3.52e-12,54;CL:0000553,3.58e-11,6;CL:0000556,3.58e-11,6;CL:0002194,4.77e-11,4;CL:0000766,4.77e-11,4;CL:0000234,4.77e-11,4;CL:0000576,4.77e-11,4;CL:0000235,4.77e-11,4;CL:0000864,4.77e-11,4;CL:0002009,4.77e-11,4;CL:0000040,4.77e-11,4;CL:0000559,4.77e-11,4;CL:0002092,5.35e-09,3;CL:0002540,5.35e-09,3;CL:0000723,1.18e-08,91;CL:0000048,1.18e-08,91;CL:0000034,7.78e-08,97;CL:0000050,2.45e-07,9;CL:0000738,7.67e-07,17;CL:0002087,7.67e-07,17 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.03e-09,3;DOID:4045,1.03e-09,3 | |||
|ontology_enrichment_uberon=UBERON:0002204!4.36e-16!32;UBERON:0001474!2.66e-15!22;UBERON:0004765!2.66e-15!22;UBERON:0001434!2.66e-15!22;UBERON:0002371!6.44e-15!16;UBERON:0002405!3.29e-09!70;UBERON:0002193!2.45e-08!48;UBERON:0002390!9.13e-07!45;UBERON:0003061!9.13e-07!45 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.72e-30,16;UBERON:0001474,2.44e-24,22;UBERON:0004765,2.44e-24,22;UBERON:0001434,2.44e-24,22;UBERON:0002204,6.73e-24,32;UBERON:0002193,1.07e-19,48;UBERON:0002405,1.07e-19,48;UBERON:0002390,2.08e-15,45;UBERON:0003061,2.08e-15,45;UBERON:0002384,5.38e-15,46;UBERON:0002465,1.30e-07,3;UBERON:0002106,3.59e-07,6;UBERON:0004457,3.59e-07,6;UBERON:0000042,3.59e-07,6;UBERON:0004854,3.59e-07,6;UBERON:0009034,3.59e-07,6;UBERON:0002095,3.59e-07,6;UBERON:0004782,3.59e-07,6;UBERON:0003281,3.59e-07,6;UBERON:0009664,3.59e-07,6;UBERON:0002296,3.59e-07,6;UBERON:0005602,3.59e-07,6;UBERON:0001179,3.59e-07,6;UBERON:0006293,3.59e-07,6;UBERON:0003081,5.96e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0.233612640595526,0,0,0,0,0,0,0,0.999329285446988,1.01237633694913,1.39912375625629,6.94016763788123,6.30726394586398,5.09267582157636,0.425216450755349,1.88652807281682,1.30599894569468,1.11994695955385,1.14704640533585,0,0,0,0,0,0,0,0,0,0,0,0,17.5783284909501,7.813353445238,12.5645698553712,21.7645650571475,22.5405010036287,22.3334762394331,0,0,0,0.782391344348039,0,0,0,0,0,5.5368259999053,0,0,0.257259436035947,0.573066879877513,0,0,0,0,0,0,4.94944844504769,4.94433181283487,2.1314403448383,2.09720077362883,1.53687322128622,0.103689612308478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0.289864488701678,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0,0,0,0.22836775943812,1.03575153458869,0,0.173485326766136,0,0,0.60289056221049,0.352766121407114,0,0.247194967734374,0.289198713839823,0.884610551949874,0.970601099684455,1.32504911076236,0.484875253135222,0,0,0.209446706813455,0,0.599075622529601,0,1.52484272487678,0.149790639404823,0,0,0,0,0,0,0,0.497627882440372,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0,0,0,0,0,0,0,0.702213187313235,1.28673953557358,2.84163499395593,0,0,0,0,0,0,0,0,0,0.16455984991348,0,0.0810688095458557,0,0.219550115291051,0.268412837520744,0,0,0,0,0,0,0,0,0.22237804384487,0,0,0,0.502670417600539,0,0,0.898819408654221,0.432276099749388,0,0,0,0,0,0,0,0,0,0,0,0,0.166845105716094,0.393117990226406,0.449724224769707,0.202860121388503,0.482354319504834,0,0.863088412352432,1.13494658742525,0,0,2.23284568601102,0.312037673114561,0,0,0.482443521363367,0.739012760666419,0,0,0,0,0.167506257441816,0.238043640886014,0,0.157635144106191,0,0.318909537314974,0.655453258862952,0.863424909329478,0.433947175744535,3.01582567878545,3.80733978673097,0.491764273019036,0,0,0,0,0.757412781613119,0,0,0,0,0,0,0,0,0,0,0,0.178065603667255,0,0.329940245945071,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0.214337035031592,0,0,0,0,0,0,0.220528398054962,0,0,0,0.119372344003136,0,0.291480836629851,0,3.07567585436135,0.412773735926445,1.85194527369712,0.376736914009382,1.50363650493128,1.83022538565218,0.339956859987711,0.419854356970974,0,0,0,0.203319467126849,0,0.209088296014469,0.436725127492355,0.134864346384821,0,0,0,0,0,0,0,0,0,0,0.117357238645754,0,0,0,0,0,0,0,0.129920822977795,0.179026695667481,0,0,0,0,0,0,0.194915761479505,0,0,0,0,0,0,0,0,0.183151624267265,0.214368379079066,0,0,0,0,0,0,0,0,0,0.453142408984205,0,0,0.399024873401031,0,0,0,0.367687016900028,0.222246727801615,0,0,0.252697211763798,0,0.188626341386076,0,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.169229215783353,0.182927972872773,0,0,0,0,0,0,0,0.385813221962283,0.249810577937946,0.233931608445408,0.214871054048298,0,0.220591419119515,0.463735671240843 | |||
|short_description=p2@Dok3 | |||
}} |
Revision as of 04:05, 6 August 2015
Short description: | p2@Dok3 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Dok3_5end |
Coexpression cluster: | MCL_coexpression_mm9:3 |
Association with transcript: | -6bp_to_uc007qrn.1_5end |
EntrezGene: | 27261 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.72e-30 | 16 |
bone element | 2.44e-24 | 22 |
skeletal element | 2.44e-24 | 22 |
skeletal system | 2.44e-24 | 22 |
musculoskeletal system | 6.73e-24 | 32 |
hemolymphoid system | 1.07e-19 | 48 |
immune system | 1.07e-19 | 48 |
hematopoietic system | 2.08e-15 | 45 |
blood island | 2.08e-15 | 45 |
connective tissue | 5.38e-15 | 46 |
lymphoid system | 1.30e-07 | 3 |
spleen | 3.59e-07 | 6 |
cavity lining | 3.59e-07 | 6 |
serous membrane | 3.59e-07 | 6 |
gastrointestinal system mesentery | 3.59e-07 | 6 |
stomach region | 3.59e-07 | 6 |
mesentery | 3.59e-07 | 6 |
gastrointestinal system serosa | 3.59e-07 | 6 |
mesentery of stomach | 3.59e-07 | 6 |
gut mesentery | 3.59e-07 | 6 |
dorsal mesentery | 3.59e-07 | 6 |
dorsal mesogastrium | 3.59e-07 | 6 |
peritoneal cavity | 3.59e-07 | 6 |
spleen primordium | 3.59e-07 | 6 |
lateral plate mesoderm | 5.96e-07 | 87 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.03e-09 | 3 |
muscle cancer | 1.03e-09 | 3 |