FFCP PHASE1:Mm9::chr18:82753958..82753970,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=42 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr18:82753958..82753970,+ | |||
|description=CAGE_peak_at_chr18:82753958..82753970,+ | |description=CAGE_peak_at_chr18:82753958..82753970,+ | ||
|id=chr18:82753958..82753970,+ | |id=chr18:82753958..82753970,+ | ||
|ontology_enrichment_celltype=CL:0002610!1.14e-08!3;CL:0002614!2.40e-08!3;CL:0000221!4.03e-08!44;CL:0000133!4.03e-08!44;CL:0000117!1.50e-07!23;CL:0000337!1.50e-07!23;CL:0000215!2.75e-07!3;CL:0002319!3.29e-07!43;CL:0000630!3.74e-07!3 | |ontology_enrichment_celltype=CL:0002610!1.14e-08!3;CL:0002614!2.40e-08!3;CL:0000221!4.03e-08!44;CL:0000133!4.03e-08!44;CL:0000117!1.50e-07!23;CL:0000337!1.50e-07!23;CL:0000215!2.75e-07!3;CL:0002319!3.29e-07!43;CL:0000630!3.74e-07!3 | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,2.30e-19,3;CL:0002611,9.45e-14,2;CL:0000878,2.61e-13,2;CL:0000129,2.61e-13,2;CL:0000117,1.15e-09,23;CL:0000337,1.15e-09,23;CL:0002319,1.19e-08,43;CL:0000221,1.95e-08,44;CL:0000133,1.95e-08,44;CL:0002194,4.23e-07,4;CL:0000766,4.23e-07,4;CL:0000234,4.23e-07,4;CL:0000576,4.23e-07,4;CL:0000235,4.23e-07,4;CL:0000864,4.23e-07,4;CL:0002009,4.23e-07,4;CL:0000040,4.23e-07,4;CL:0000559,4.23e-07,4 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!2.37e-20!75;UBERON:0001016!2.37e-20!75;UBERON:0001017!8.41e-18!73;UBERON:0005743!8.41e-18!73;UBERON:0004121!7.14e-17!102;UBERON:0000924!7.14e-17!102;UBERON:0006601!7.14e-17!102;UBERON:0000955!1.42e-15!50;UBERON:0006238!1.42e-15!50;UBERON:0002298!2.70e-15!6;UBERON:0001049!7.82e-15!52;UBERON:0005068!7.82e-15!52;UBERON:0006241!7.82e-15!52;UBERON:0007135!7.82e-15!52;UBERON:0002616!2.63e-14!49;UBERON:0000033!5.38e-14!63;UBERON:0003076!6.22e-13!12;UBERON:0003057!6.22e-13!12;UBERON:0002346!7.40e-12!71;UBERON:0003075!7.40e-12!71;UBERON:0007284!7.40e-12!71;UBERON:0002950!1.81e-10!4;UBERON:0001891!1.81e-10!4;UBERON:0009616!1.81e-10!4;UBERON:0007811!7.01e-10!86;UBERON:0004684!1.14e-08!3;UBERON:0002275!1.14e-08!3;UBERON:0000153!1.36e-08!94;UBERON:0002038!2.40e-08!3;UBERON:0002308!2.40e-08!3;UBERON:0009663!2.40e-08!3;UBERON:0009661!2.40e-08!3;UBERON:0006331!2.40e-08!3;UBERON:0000125!2.40e-08!3;UBERON:0002020!6.14e-08!34;UBERON:0004733!2.33e-07!6;UBERON:0004732!2.33e-07!6;UBERON:0002028!2.33e-07!6;UBERON:0007277!2.33e-07!6;UBERON:0002240!4.35e-07!6;UBERON:0005174!4.35e-07!6;UBERON:0001137!4.35e-07!6 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,2.30e-19,3;UBERON:0002275,2.30e-19,3;UBERON:0003076,4.24e-19,12;UBERON:0003057,4.24e-19,12;UBERON:0001017,1.24e-15,73;UBERON:0001016,3.51e-15,75;UBERON:0001896,8.16e-14,2;UBERON:0002298,8.16e-14,2;UBERON:0005290,8.16e-14,2;UBERON:0010096,8.16e-14,2;UBERON:0002256,9.45e-14,2;UBERON:0000073,4.97e-13,54;UBERON:0004121,1.10e-11,95;UBERON:0000924,1.10e-11,95;UBERON:0006601,1.10e-11,95;UBERON:0004733,2.15e-10,6;UBERON:0004732,2.15e-10,6;UBERON:0002028,2.15e-10,6;UBERON:0007277,2.15e-10,6;UBERON:0002240,3.32e-10,6;UBERON:0005174,3.32e-10,6;UBERON:0001137,3.32e-10,6;UBERON:0001049,5.13e-09,52;UBERON:0005068,5.13e-09,52;UBERON:0006241,5.13e-09,52;UBERON:0007135,5.13e-09,52;UBERON:0002346,3.92e-07,64;UBERON:0003075,3.92e-07,64;UBERON:0007284,3.92e-07,64 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,1.53687322128622,0,0,0,1.42825492201902,1.98781686856452,0,0,0,1.10115880999389,1.91531007127782,1.84327839907492,0,0,0,2.23346399201105,0.56276261003168,0.916789486660861,0,0.284743361598206,0,0.530083353332288,0.151143120213571,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,11.51956887474,0,0,0,0,0.599162557619291,0.915001205637253,0,0,0,1.24672826735736,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,2.34423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695603506861264 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19840044207362,1.53687322128622,0,0,0,1.42825492201902,1.98781686856452,0,0,0,1.10115880999389,1.91531007127782,1.84327839907492,0,0,0,2.23346399201105,0.56276261003168,0.916789486660861,0,0.284743361598206,0,0.530083353332288,0.151143120213571,0.289864488701678,0,0,0,0,0,0.140444420131752,0,0,0,0.14084341977668,0,0,0,0,0,0,0.45673551887624,0,0,0,0,0,0,0,0.125666591329675,0,0,0,0,0,0,0,0.585561594023094,11.51956887474,0,0,0,0,0.599162557619291,0.915001205637253,0,0,0,1.24672826735736,0.486723789203273,0,0,0,0,0,0,0,0,0,0,0.0937017245597288,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.420579897128254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.28440471990234,2.34423373184406,0,0,0,0,0,0,0,0,0,0,0,0.321321316421807,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.8542530201051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194451188344048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147689527174577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.12950368523413,0,0.572895513439397,0.171853182343688,0,0,0,0.45032120322422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.695603506861264 | ||
|short_description=p@chr18:82753958..82753970,+ | |short_description=p@chr18:82753958..82753970,+ | ||
}} | }} |
Latest revision as of 04:50, 6 August 2015
Short description: | p@chr18:82753958..82753970, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:82753958..82753970, + |
Coexpression cluster: | MCL_coexpression_mm9:42 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 2.30e-19 | 3 |
neuron of the dorsal spinal cord | 9.45e-14 | 2 |
central nervous system macrophage | 2.61e-13 | 2 |
microglial cell | 2.61e-13 | 2 |
CNS neuron (sensu Vertebrata) | 1.15e-09 | 23 |
neuroblast (sensu Vertebrata) | 1.15e-09 | 23 |
neural cell | 1.19e-08 | 43 |
ectodermal cell | 1.95e-08 | 44 |
neurectodermal cell | 1.95e-08 | 44 |
monopoietic cell | 4.23e-07 | 4 |
myeloid leukocyte | 4.23e-07 | 4 |
phagocyte | 4.23e-07 | 4 |
monocyte | 4.23e-07 | 4 |
macrophage | 4.23e-07 | 4 |
tissue-resident macrophage | 4.23e-07 | 4 |
macrophage dendritic cell progenitor | 4.23e-07 | 4 |
monoblast | 4.23e-07 | 4 |
promonocyte | 4.23e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 2.30e-19 | 3 |
reticular formation | 2.30e-19 | 3 |
posterior neural tube | 4.24e-19 | 12 |
chordal neural plate | 4.24e-19 | 12 |
central nervous system | 1.24e-15 | 73 |
nervous system | 3.51e-15 | 75 |
medulla oblongata | 8.16e-14 | 2 |
brainstem | 8.16e-14 | 2 |
myelencephalon | 8.16e-14 | 2 |
future myelencephalon | 8.16e-14 | 2 |
dorsal horn of spinal cord | 9.45e-14 | 2 |
regional part of nervous system | 4.97e-13 | 54 |
ectoderm-derived structure | 1.10e-11 | 95 |
ectoderm | 1.10e-11 | 95 |
presumptive ectoderm | 1.10e-11 | 95 |
segmental subdivision of hindbrain | 2.15e-10 | 6 |
segmental subdivision of nervous system | 2.15e-10 | 6 |
hindbrain | 2.15e-10 | 6 |
presumptive hindbrain | 2.15e-10 | 6 |
spinal cord | 3.32e-10 | 6 |
dorsal region element | 3.32e-10 | 6 |
dorsum | 3.32e-10 | 6 |
neural tube | 5.13e-09 | 52 |
neural rod | 5.13e-09 | 52 |
future spinal cord | 5.13e-09 | 52 |
neural keel | 5.13e-09 | 52 |
neurectoderm | 3.92e-07 | 64 |
neural plate | 3.92e-07 | 64 |
presumptive neural plate | 3.92e-07 | 64 |