FFCP PHASE1:Mm9::chrX:7258128..7258158,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=54634|HGNC=|MCL_coexpression_id=8|UniProt=Q4KL35,Q3TZ57|association_with_transcript=56bp_to_ENSMUST00000115695,NM_018832,uc009sly.1_5end|description=CAGE_peak_1_at_Magix_5end|id=chrX:7258128..7258158,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000182,9.85e-09,5|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!4.88e-13!22;UBERON:0007499!4.88e-13!22;UBERON:0006925!4.88e-13!22;UBERON:0009497!4.88e-13!22;UBERON:0000015!4.88e-13!22;UBERON:0002423!4.88e-13!22;UBERON:0006235!4.88e-13!22;UBERON:0008835!4.88e-13!22;UBERON:0003894!4.88e-13!22;UBERON:0004161!4.88e-13!22;UBERON:0008836!4.88e-13!22;UBERON:0009569!1.03e-12!66;UBERON:0002365!2.52e-12!25;UBERON:0002330!2.52e-12!25;UBERON:0009854!3.31e-12!23;UBERON:0009856!3.31e-12!23;UBERON:0005177!1.07e-11!85;UBERON:0003914!1.34e-11!47;UBERON:0005172!5.67e-11!49;UBERON:0005173!5.67e-11!49;UBERON:0002417!5.67e-11!49;UBERON:0000916!5.67e-11!49;UBERON:0000466!4.69e-10!79;UBERON:0003104!6.29e-10!131;UBERON:0009142!6.29e-10!131;UBERON:0002100!3.11e-09!98;UBERON:0005256!1.02e-08!47;UBERON:0000926!1.37e-07!193;UBERON:0004120!1.37e-07!193;UBERON:0006603!1.37e-07!193;UBERON:0000077!1.60e-07!97;UBERON:0004111!2.22e-07!122;UBERON:0001041!2.67e-07!92|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.28e-20,22;UBERON:0007499,3.28e-20,22;UBERON:0006925,3.28e-20,22;UBERON:0009497,3.28e-20,22;UBERON:0000015,3.28e-20,22;UBERON:0002423,3.28e-20,22;UBERON:0006235,3.28e-20,22;UBERON:0008835,3.28e-20,22;UBERON:0003894,3.28e-20,22;UBERON:0004161,3.28e-20,22;UBERON:0008836,3.28e-20,22;UBERON:0002365,5.29e-20,25;UBERON:0002330,5.29e-20,25;UBERON:0009854,3.47e-19,23;UBERON:0009856,3.47e-19,23;UBERON:0003914,5.01e-19,47;UBERON:0005172,4.26e-14,49;UBERON:0005173,4.26e-14,49;UBERON:0002417,4.26e-14,49;UBERON:0000916,4.26e-14,49;UBERON:0003104,4.23e-13,61;UBERON:0009142,4.23e-13,61;UBERON:0005256,2.13e-12,45;UBERON:0009569,2.56e-09,66;UBERON:0005177,5.48e-09,79;UBERON:0002100,3.29e-08,90;UBERON:0004111,5.95e-08,122;UBERON:0002530,1.97e-07,65;UBERON:0003929,3.80e-07,55|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0.579728977403356,18.9293252935905,2.719885334831,18.8896117073236,29.8897152025928,23.7454250161588,12.2186645514624,0,0,0,0,0,0,0,0,0.760079596425296,0.505524445014783,4.33898742932428,0,0.29688427812965,0,0,0,0,0,0.251333182659351,0,1.44599356919912,2.65383165584962,0.161766849947409,0.662524555381181,0.969750506270444,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0.324482526135515,0.101839363850316,1.7416975885413,0.758168275301024,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,2.79084688934462,8.18794976413143,14.1813987802572,11.4166059951346,12.0785776884335,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0.69560190836683,1.91893192373483,2.04098346193787,3.70191491765402,20.7516838961004,0,0,0,0,0,0.763877555344259,1.15078454980324,0.648540907100142,4.3929826110093,8.62609239164127,7.07067800570156,9.67316786655138,19.7011524798747,15.2487801493625,27.0168371963486,0.554259570499814,0,0,0,0,0,0.714130922658041,0.195133647857799,0,0,0.478364305972461,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0,0.160550589987792,0.117211686592203,0,13.6334300690361,0.315508219416257,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,1.15479086080775,1.32745138339963,0,0,0,0.295301892880773,0,0,0,0,0.948110273807448,0,3.09406629744561,0.680879211507576,0,0,0,0,0,0,0,0,0,2.64634077665954,1.48397627647332,0,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,2.86401185404534,0,0,0,0,0,0.134864346384821,0.743881101528023,2.09404753587224,0,3.10669656543463,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,7.9355634265324,0,0,0,0.19318959403219,0,0.549454872801795,0,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0,0.365855945745545,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0.220591419119515,0.695603506861264|short_description=p1@Magix}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:54634 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q4KL35,uniprot:Q3TZ57 | |||
|association_with_transcript=56bp_to_ENSMUST00000115695,NM_018832,uc009sly.1_5end | |||
|cluster_id=chrX:7258128..7258158,- | |||
|description=CAGE_peak_1_at_Magix_5end | |||
|id=chrX:7258128..7258158,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,9.85e-09,5 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!4.88e-13!22;UBERON:0007499!4.88e-13!22;UBERON:0006925!4.88e-13!22;UBERON:0009497!4.88e-13!22;UBERON:0000015!4.88e-13!22;UBERON:0002423!4.88e-13!22;UBERON:0006235!4.88e-13!22;UBERON:0008835!4.88e-13!22;UBERON:0003894!4.88e-13!22;UBERON:0004161!4.88e-13!22;UBERON:0008836!4.88e-13!22;UBERON:0009569!1.03e-12!66;UBERON:0002365!2.52e-12!25;UBERON:0002330!2.52e-12!25;UBERON:0009854!3.31e-12!23;UBERON:0009856!3.31e-12!23;UBERON:0005177!1.07e-11!85;UBERON:0003914!1.34e-11!47;UBERON:0005172!5.67e-11!49;UBERON:0005173!5.67e-11!49;UBERON:0002417!5.67e-11!49;UBERON:0000916!5.67e-11!49;UBERON:0000466!4.69e-10!79;UBERON:0003104!6.29e-10!131;UBERON:0009142!6.29e-10!131;UBERON:0002100!3.11e-09!98;UBERON:0005256!1.02e-08!47;UBERON:0000926!1.37e-07!193;UBERON:0004120!1.37e-07!193;UBERON:0006603!1.37e-07!193;UBERON:0000077!1.60e-07!97;UBERON:0004111!2.22e-07!122;UBERON:0001041!2.67e-07!92 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,3.28e-20,22;UBERON:0007499,3.28e-20,22;UBERON:0006925,3.28e-20,22;UBERON:0009497,3.28e-20,22;UBERON:0000015,3.28e-20,22;UBERON:0002423,3.28e-20,22;UBERON:0006235,3.28e-20,22;UBERON:0008835,3.28e-20,22;UBERON:0003894,3.28e-20,22;UBERON:0004161,3.28e-20,22;UBERON:0008836,3.28e-20,22;UBERON:0002365,5.29e-20,25;UBERON:0002330,5.29e-20,25;UBERON:0009854,3.47e-19,23;UBERON:0009856,3.47e-19,23;UBERON:0003914,5.01e-19,47;UBERON:0005172,4.26e-14,49;UBERON:0005173,4.26e-14,49;UBERON:0002417,4.26e-14,49;UBERON:0000916,4.26e-14,49;UBERON:0003104,4.23e-13,61;UBERON:0009142,4.23e-13,61;UBERON:0005256,2.13e-12,45;UBERON:0009569,2.56e-09,66;UBERON:0005177,5.48e-09,79;UBERON:0002100,3.29e-08,90;UBERON:0004111,5.95e-08,122;UBERON:0002530,1.97e-07,65;UBERON:0003929,3.80e-07,55 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.425216450755349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279182999001381,0,0,0,0,0,0,0,0.579728977403356,18.9293252935905,2.719885334831,18.8896117073236,29.8897152025928,23.7454250161588,12.2186645514624,0,0,0,0,0,0,0,0,0.760079596425296,0.505524445014783,4.33898742932428,0,0.29688427812965,0,0,0,0,0,0.251333182659351,0,1.44599356919912,2.65383165584962,0.161766849947409,0.662524555381181,0.969750506270444,0,0.292780797011547,0.41889341362691,0,0,0,0,0,0,0,0,0,0,0.324482526135515,0.101839363850316,1.7416975885413,0.758168275301024,0.420883711772948,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.268273401399619,0,0,2.79084688934462,8.18794976413143,14.1813987802572,11.4166059951346,12.0785776884335,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0.19496408711912,0,0,0.199141273254367,0,0,0,0,0,0,0.69560190836683,1.91893192373483,2.04098346193787,3.70191491765402,20.7516838961004,0,0,0,0,0,0.763877555344259,1.15078454980324,0.648540907100142,4.3929826110093,8.62609239164127,7.07067800570156,9.67316786655138,19.7011524798747,15.2487801493625,27.0168371963486,0.554259570499814,0,0,0,0,0,0.714130922658041,0.195133647857799,0,0,0.478364305972461,0.327726629431476,0.172684981865896,0.433947175744535,0,0,0,0,0.160550589987792,0.117211686592203,0,13.6334300690361,0.315508219416257,0,0,0,0,0,0,0,0,0,0.283880170416537,0,0,1.15479086080775,1.32745138339963,0,0,0,0.295301892880773,0,0,0,0,0.948110273807448,0,3.09406629744561,0.680879211507576,0,0,0,0,0,0,0,0,0,2.64634077665954,1.48397627647332,0,0.0603129249281559,0,0.164140899745061,0,0.18542530201051,0,0,0,0,0.136694227721025,0,0,0,0,2.86401185404534,0,0,0,0,0,0.134864346384821,0.743881101528023,2.09404753587224,0,3.10669656543463,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0.316011120628178,0,0,0,0,0,0,0,0,0,0.100826185136841,0,0,0,7.9355634265324,0,0,0,0.19318959403219,0,0.549454872801795,0,3.51100472824754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0,0,0,0,0,0,0,0.238436189947321,0.145346416632329,0,0,0.365855945745545,0,0,0.561142271657738,0,0,0,0,0,0,0,0,0,0.220591419119515,0.695603506861264 | |||
|short_description=p1@Magix | |||
}} |
Revision as of 10:39, 6 August 2015
Short description: | p1@Magix |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Magix_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 56bp_to_ENSMUST00000115695, NM_018832, uc009sly.1_5end |
EntrezGene: | 54634 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 9.85e-09 | 5 |
Ontology term | p-value | n |
---|---|---|
liver | 3.28e-20 | 22 |
epithelial sac | 3.28e-20 | 22 |
digestive gland | 3.28e-20 | 22 |
epithelium of foregut-midgut junction | 3.28e-20 | 22 |
anatomical boundary | 3.28e-20 | 22 |
hepatobiliary system | 3.28e-20 | 22 |
foregut-midgut junction | 3.28e-20 | 22 |
hepatic diverticulum | 3.28e-20 | 22 |
liver primordium | 3.28e-20 | 22 |
septum transversum | 3.28e-20 | 22 |
liver bud | 3.28e-20 | 22 |
exocrine gland | 5.29e-20 | 25 |
exocrine system | 5.29e-20 | 25 |
digestive tract diverticulum | 3.47e-19 | 23 |
sac | 3.47e-19 | 23 |
epithelial tube | 5.01e-19 | 47 |
abdomen element | 4.26e-14 | 49 |
abdominal segment element | 4.26e-14 | 49 |
abdominal segment of trunk | 4.26e-14 | 49 |
abdomen | 4.26e-14 | 49 |
mesenchyme | 4.23e-13 | 61 |
entire embryonic mesenchyme | 4.23e-13 | 61 |
trunk mesenchyme | 2.13e-12 | 45 |
subdivision of trunk | 2.56e-09 | 66 |
trunk region element | 5.48e-09 | 79 |
trunk | 3.29e-08 | 90 |
anatomical conduit | 5.95e-08 | 122 |
gland | 1.97e-07 | 65 |
gut epithelium | 3.80e-07 | 55 |