FFCP PHASE1:Hg19::chr17:47210125..47210136,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=124872 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24136 | |||
|TSSclassifier=strong | |||
|UniProt=B4DZE4,Q8NHY0 | |||
|association_with_transcript=0bp_to_ENST00000393354,NM_001159387,uc010wlu.1_5end | |||
|cluster_id=chr17:47210125..47210136,+ | |||
|coexpression_cluster_id=C542 | |||
|description=CAGE_peak_1_at_B4GALNT2_5end | |||
|id=chr17:47210125..47210136,+ | |||
|ontology_enrichment_celltype=CL:0000066!1.21e-15!254;CL:0002076!5.64e-10!43;CL:0002159!1.19e-09!13;CL:0000244!5.01e-08!4;CL:0000731!5.01e-08!4;CL:0000223!8.70e-07!59 | |||
|ontology_enrichment_celltype_v019=CL:0000244;2.24e-10;4!CL:0000731;2.24e-10;4!CL:0000317;2.46e-09;2!CL:1000448;2.46e-09;2!CL:0002308;2.46e-09;2!CL:0002140;2.46e-09;2!CL:0002159;2.38e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.85e-10,4;CL:0000731,1.85e-10,4;CL:0000066,1.24e-09,253;CL:0000317,1.34e-09,2;CL:1000448,1.34e-09,2;CL:0002308,1.34e-09,2;CL:0002140,1.34e-09,2;CL:0002159,2.09e-07,14;CL:0002076,6.19e-07,42 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.94e-07;10!UBERON:0007687;2.94e-07;10 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001008!7.01e-20!45;UBERON:0004119!1.18e-19!169;UBERON:0000925!1.18e-19!169;UBERON:0006595!1.18e-19!169;UBERON:0006554!9.64e-19!44;UBERON:0001007!5.82e-14!155;UBERON:0001555!5.82e-14!155;UBERON:0007026!5.82e-14!155;UBERON:0003064!2.48e-13!37;UBERON:0000162!4.99e-13!14;UBERON:0001353!4.99e-13!14;UBERON:0000163!4.99e-13!14;UBERON:0006866!4.99e-13!14;UBERON:0000164!4.99e-13!14;UBERON:0000931!4.99e-13!14;UBERON:0000161!1.83e-12!35;UBERON:0004122!5.63e-12!15;UBERON:0002367!1.82e-11!11;UBERON:0010147!1.82e-11!11;UBERON:0009846!1.82e-11!11;UBERON:0003353!1.82e-11!11;UBERON:0004902!1.82e-11!11;UBERON:0003820!1.82e-11!11;UBERON:0009847!1.82e-11!11;UBERON:0001046!6.20e-11!19;UBERON:0003937!2.41e-10!12;UBERON:0005399!2.41e-10!12;UBERON:0004921!3.25e-10!129;UBERON:0004185!3.25e-10!129;UBERON:0000481!3.37e-10!347;UBERON:0000365!1.73e-09!5;UBERON:0005911!1.54e-08!82;UBERON:0003101!1.66e-08!22;UBERON:0000079!1.66e-08!22;UBERON:0000922!6.39e-08!612;UBERON:0005910!8.29e-08!6;UBERON:0003929!4.31e-07!54;UBERON:0003102!4.52e-07!95;UBERON:0000077!5.17e-07!130;UBERON:0003104!6.53e-07!238;UBERON:0009142!6.53e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0000160;7.34e-15;17!UBERON:0005409;2.62e-14;22!UBERON:0004921;1.05e-10;33!UBERON:0006554;3.67e-10;30!UBERON:0001008;3.67e-10;30!UBERON:0002294;4.58e-10;7!UBERON:0001173;4.58e-10;7!UBERON:0002419;2.46e-09;2!UBERON:0007771;2.46e-09;2!UBERON:0003297;2.46e-09;2!UBERON:0001821;2.46e-09;2!UBERON:0003487;2.46e-09;2!UBERON:0001820;2.46e-09;2!UBERON:0001155;1.60e-08;9!UBERON:0000365;2.17e-08;5!UBERON:0005910;4.64e-07;6!UBERON:0000059;5.67e-07;11!UBERON:0002110;7.16e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,8.47e-15,17;UBERON:0005409,2.05e-12,25;UBERON:0004119,2.53e-11,160;UBERON:0000925,2.53e-11,160;UBERON:0006595,2.53e-11,160;UBERON:0006554,9.78e-11,47;UBERON:0001008,1.84e-10,48;UBERON:0002419,1.34e-09,2;UBERON:0007771,1.34e-09,2;UBERON:0003297,1.34e-09,2;UBERON:0001821,1.34e-09,2;UBERON:0003487,1.34e-09,2;UBERON:0001820,1.34e-09,2;UBERON:0005089,1.34e-09,2;UBERON:0005088,1.34e-09,2;UBERON:0005911,1.46e-08,82;UBERON:0001155,1.61e-08,9;UBERON:0000365,1.86e-08,5;UBERON:0002294,8.65e-08,9;UBERON:0001173,8.65e-08,9;UBERON:0004912,8.65e-08,9;UBERON:0003929,1.49e-07,54;UBERON:0001007,1.72e-07,145;UBERON:0001555,1.72e-07,145;UBERON:0007026,1.72e-07,145;UBERON:0005910,4.09e-07,6;UBERON:0000059,5.72e-07,11;UBERON:0002110,6.56e-07,3;UBERON:0006242,6.56e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.495065411840187,0,0,0,0,0,0,0.408001382488506,0,0,0,0,0,0,0,0,0,0,1.83884244895785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,2.91436230634034,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0.24666754841716,0,0,0,0,0,0.234321431833797,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0.206651562351531,0,0,0,0,0,0,0,0,0.30648779579902,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0,0.132529768321485,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0.118306800039844,0.337169380156203,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,1.47586126251736,0,0.219500570817251,1.1240175325762,0,1.75918045801206,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,1.34385702559088,0.283550194484773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.271265023699736,0,0,0,0,0,0,0,0,0,0.0868836144680828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.725156697549733,2.80709058424599,1.10497186723076,2.18147451512753,0.364182336013434,0.393373244878272,0.902399225814824,1.61732207919271,0,0,0.844413031143006,0,0,0.215915916102139,0,0,0,1.01950509218015,0.831076008928724,0.223874754722178,0,0,0.256450125116389,0,0,0,0,0,1.72279661398852,1.95018073810956,0,0,0,0,0,0,0,0,0,0.330569830721956,0.960950336825531,4.33883222481586,3.6416801107998,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.682499557039929,0.848432591722276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0,1.72202149068492,1.68471475667626,0.443430153536676,7.3511488066227,0,0,0,0,0,0,0,0,0,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.2616279454951,0,0,0,0,1.16828856491525,0,0,0,0,0,0,0,0,0,1.22443999994674,0,0.455173793141999,0,0,0,0,0,0,0,0,0,0,0,0,3.20674611840788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.979396848954886,0,0,32.8436437255907,3.27292988662355,6.11030144933625,0,0,0,0,0,0,0,0.586993856796269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.05784034570193,0.783532859223623,0,0,0,0,0,0,0,0,0,0,0,9.58201775400535,0,1.70762395791482,0.19980960958213,0.144090417154106,0,0,0,0,13.4345599731573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0.2249738915515,0,0,0,2.99461687736953,1.25891011523995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110929051536852,0,0.138348634936231,0,0,0,5.17584803335978,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0.192619830407303,0.643324774124777,0,0,0.231522474323834,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.19638523158333,0,0,0,0,0,0,0,0,0,0,0,0,0,3.062454773532,0,0,0,0,0,0,0,0,0,0,0.550285795565037,0,0,7.59395918666111,0,0,0.20170506870352,0,0,0,1.18284868973636,0,0,0,0,0,0,0,0,14.0538670403555,0,0,0,0,0.0887023701626388,0,0,0,0,0,0.111231401892069,0,0,0,0,2.59113109462346,12.4215438850633,0.142953088353313,0,0,0,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0.223710863595585,0,0,0,0,0,0,0,0,0,0,0,0,4.09023037972107,0.437119121007915,0,0,9.66273843116666,0.392616934229891,0,0,0,0,0,0,62.6724324505858,0,0,2.19100916473955,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0.305966489225945,0.26721740526556,0,0.250707539292375,0,0,0,0,0,1.1903221573187,0,0,0,3.4369465470209,7.88257036937055,0,0.684466602170562,0.26940821205835,0.645499848534087,0,0.814032686109745,0,0,0,0,0,0,0.665756774185513,0,0 | |||
|short_description=p1@B4GALNT2 | |||
}} |
Latest revision as of 19:57, 15 September 2015
Short description: | p1@B4GALNT2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_B4GALNT2_5end |
Coexpression cluster: | C542_squamous_colon_pharyngeal_ductal_renal_gall_peripheral |
Association with transcript: | 0bp_to_ENST00000393354, NM_001159387, uc010wlu.1_5end |
EntrezGene: | B4GALNT2 |
HGNC: | 24136 |
UniProt: | B4DZE4Q8NHY0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.85e-10 | 4 |
urothelial cell | 1.85e-10 | 4 |
epithelial cell | 1.24e-09 | 253 |
sebum secreting cell | 1.34e-09 | 2 |
epithelial cell of sweat gland | 1.34e-09 | 2 |
epithelial cell of skin gland | 1.34e-09 | 2 |
acinar cell of sebaceous gland | 1.34e-09 | 2 |
general ecto-epithelial cell | 2.09e-07 | 14 |
endo-epithelial cell | 6.19e-07 | 42 |
Ontology term | p-value | n |
---|---|---|
intestine | 8.47e-15 | 17 |
gastrointestinal system | 2.05e-12 | 25 |
endoderm-derived structure | 2.53e-11 | 160 |
endoderm | 2.53e-11 | 160 |
presumptive endoderm | 2.53e-11 | 160 |
urinary system structure | 9.78e-11 | 47 |
renal system | 1.84e-10 | 48 |
skin gland | 1.34e-09 | 2 |
epidermis gland | 1.34e-09 | 2 |
gland of integumental system | 1.34e-09 | 2 |
sebaceous gland | 1.34e-09 | 2 |
skin sebaceous gland | 1.34e-09 | 2 |
sweat gland | 1.34e-09 | 2 |
sweat gland placode | 1.34e-09 | 2 |
sebaceous gland placode | 1.34e-09 | 2 |
endo-epithelium | 1.46e-08 | 82 |
colon | 1.61e-08 | 9 |
urothelium | 1.86e-08 | 5 |
biliary system | 8.65e-08 | 9 |
biliary tree | 8.65e-08 | 9 |
biliary bud | 8.65e-08 | 9 |
gut epithelium | 1.49e-07 | 54 |
digestive system | 1.72e-07 | 145 |
digestive tract | 1.72e-07 | 145 |
primitive gut | 1.72e-07 | 145 |
transitional epithelium | 4.09e-07 | 6 |
large intestine | 5.72e-07 | 11 |
gallbladder | 6.56e-07 | 3 |
gall bladder primordium | 6.56e-07 | 3 |