FFCP PHASE1:Hg19::chr11:117014993..117015017,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5049 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8575 | |||
|TSSclassifier=strong | |||
|UniProt=P68402,E9PEJ5,A8DPS6,A8DPS7,E9PLP3,Q6IBR6 | |||
|association_with_transcript=0bp_to_ENST00000304808,ENST00000419197,ENST00000529887,NM_001184746,NM_001184747,NM_001184748,NM_002572_5end | |||
|cluster_id=chr11:117014993..117015017,+ | |||
|description=CAGE_peak_1_at_PAFAH1B2_5end | |||
|id=chr11:117014993..117015017,+ | |||
|ontology_enrichment_celltype=CL:0000220!2.91e-08!246;CL:0002321!6.32e-08!248;CL:0000071!6.04e-07!18;CL:0002546!6.04e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000071;5.99e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0002321,3.80e-08,250;CL:0000071,6.04e-07,18;CL:0002546,6.04e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002546;5.99e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!2.38e-21!57;UBERON:0005068!2.38e-21!57;UBERON:0006241!2.38e-21!57;UBERON:0007135!2.38e-21!57;UBERON:0000025!6.56e-21!194;UBERON:0002616!2.66e-18!59;UBERON:0000073!9.34e-18!94;UBERON:0001016!9.34e-18!94;UBERON:0004111!1.23e-17!241;UBERON:0003075!4.42e-17!86;UBERON:0007284!4.42e-17!86;UBERON:0003080!1.39e-16!42;UBERON:0001017!4.02e-16!82;UBERON:0002780!4.38e-16!41;UBERON:0001890!4.38e-16!41;UBERON:0006240!4.38e-16!41;UBERON:0002346!6.14e-16!90;UBERON:0000467!1.51e-15!625;UBERON:0000480!2.67e-15!626;UBERON:0005743!4.71e-15!86;UBERON:0000119!5.23e-15!312;UBERON:0004121!6.29e-15!169;UBERON:0000955!1.09e-14!69;UBERON:0006238!1.09e-14!69;UBERON:0000483!1.27e-14!309;UBERON:0000924!2.61e-14!173;UBERON:0006601!2.61e-14!173;UBERON:0000477!3.84e-14!286;UBERON:0002020!1.18e-13!34;UBERON:0003528!1.18e-13!34;UBERON:0001893!2.09e-13!34;UBERON:0002791!4.96e-13!33;UBERON:0000468!5.89e-13!659;UBERON:0001869!1.64e-12!32;UBERON:0003056!4.68e-12!61;UBERON:0002050!1.33e-11!605;UBERON:0005423!1.33e-11!605;UBERON:0000923!1.41e-11!604;UBERON:0005291!1.41e-11!604;UBERON:0006598!1.41e-11!604;UBERON:0002532!1.41e-11!604;UBERON:0000922!4.45e-11!612;UBERON:0000033!8.66e-11!123;UBERON:0000956!1.06e-09!25;UBERON:0000203!1.06e-09!25;UBERON:0002619!1.55e-09!22;UBERON:0001981!1.57e-09!60;UBERON:0007500!1.57e-09!60;UBERON:0004537!1.57e-09!60;UBERON:0006965!1.57e-09!60;UBERON:0000153!3.18e-09!129;UBERON:0007811!3.18e-09!129;UBERON:0000055!3.82e-09!69;UBERON:0007023!7.02e-09!115;UBERON:0001950!1.12e-08!20;UBERON:0004872!1.42e-08!84;UBERON:0002049!7.00e-08!79;UBERON:0007798!7.00e-08!79;UBERON:0000062!4.69e-07!511;UBERON:0001637!4.80e-07!42;UBERON:0003509!4.80e-07!42;UBERON:0004572!4.80e-07!42;UBERON:0001986!6.04e-07!18;UBERON:0004638!6.04e-07!18;UBERON:0004852!6.04e-07!18;UBERON:0000487!6.41e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0000073;8.21e-12;53!UBERON:0002616;8.21e-12;53!UBERON:0003528;8.91e-12;34!UBERON:0002020;8.91e-12;34!UBERON:0002780;1.01e-11;41!UBERON:0001890;1.01e-11;41!UBERON:0001893;1.26e-11;34!UBERON:0002791;2.31e-11;32!UBERON:0001869;2.39e-11;32!UBERON:0000956;1.03e-09;25!UBERON:0000203;1.03e-09;25!UBERON:0002619;1.53e-09;22!UBERON:0001950;1.09e-08;20!UBERON:0001017;9.33e-08;75!UBERON:0001016;1.03e-07;83!UBERON:0000955;1.04e-07;68!UBERON:0004638;5.99e-07;18!UBERON:0001986;5.99e-07;18!UBERON:0004852;5.99e-07;18!UBERON:0000487;6.25e-07;22!UBERON:0000490;6.72e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.69e-21,56;UBERON:0005068,7.69e-21,56;UBERON:0006241,7.69e-21,56;UBERON:0007135,7.69e-21,56;UBERON:0000025,1.92e-20,192;UBERON:0000073,1.95e-19,53;UBERON:0002616,1.95e-19,53;UBERON:0001016,1.99e-18,89;UBERON:0010314,1.66e-17,132;UBERON:0004111,7.50e-17,240;UBERON:0002780,4.38e-16,41;UBERON:0001890,4.38e-16,41;UBERON:0003080,4.38e-16,41;UBERON:0006240,4.38e-16,41;UBERON:0003075,9.56e-16,82;UBERON:0007284,9.56e-16,82;UBERON:0001017,1.11e-15,81;UBERON:0002346,1.22e-14,86;UBERON:0010371,1.77e-14,104;UBERON:0000955,3.03e-14,68;UBERON:0006238,3.03e-14,68;UBERON:0000119,1.13e-13,309;UBERON:0003528,1.18e-13,34;UBERON:0002020,1.18e-13,34;UBERON:0001893,2.09e-13,34;UBERON:0000483,2.65e-13,306;UBERON:0004121,9.57e-13,171;UBERON:0000924,9.57e-13,171;UBERON:0006601,9.57e-13,171;UBERON:0002791,1.36e-12,32;UBERON:0001869,1.64e-12,32;UBERON:0002050,1.87e-12,564;UBERON:0003056,3.71e-12,61;UBERON:0005423,7.97e-12,581;UBERON:0000922,1.36e-11,592;UBERON:0000923,1.87e-11,560;UBERON:0010316,1.87e-11,560;UBERON:0005291,1.87e-11,560;UBERON:0006598,1.87e-11,560;UBERON:0010317,1.87e-11,560;UBERON:0002532,1.87e-11,560;UBERON:0000956,1.06e-09,25;UBERON:0000203,1.06e-09,25;UBERON:0002619,1.55e-09,22;UBERON:0007500,4.11e-09,59;UBERON:0001981,4.11e-09,59;UBERON:0004537,4.11e-09,59;UBERON:0006965,4.11e-09,59;UBERON:0000055,9.45e-09,68;UBERON:0001950,1.12e-08,20;UBERON:0007023,1.33e-08,114;UBERON:0004872,3.24e-08,83;UBERON:0011216,6.19e-08,223;UBERON:0002049,1.58e-07,78;UBERON:0007798,1.58e-07,78;UBERON:0001637,4.80e-07,42;UBERON:0003509,4.80e-07,42;UBERON:0004572,4.80e-07,42;UBERON:0004638,6.04e-07,18;UBERON:0001986,6.04e-07,18;UBERON:0004852,6.04e-07,18;UBERON:0000487,6.41e-07,22 | |||
|phase1_expression=49.2348407823208,58.2353424983474,56.9455792547723,59.0432460283469,61.2336699365384,63.6807122593269,25.3299878168311,49.9058700007196,45.9686705631716,79.1263275534859,35.5878595665938,124.730023486328,87.5706367718466,47.2787468307378,79.5353701746998,52.4413614232385,60.2694528023977,61.3460475925393,65.8709278367184,83.8454405502926,58.5481983871006,49.839300715016,75.566300602599,75.2809337900863,80.7239172594582,35.4558202670494,37.6020699680752,38.0173073745071,113.682276009333,83.2909793870951,87.9355580435312,102.055755917161,152.410194901795,87.6317004095287,36.6419858744827,33.8362773320063,40.8104610675438,48.7515959508052,54.1470008169383,55.9888046446898,54.4114602403016,59.9203282135112,65.6817697467176,109.921068517351,139.814099164859,141.669091733685,75.5394369943475,80.177738164256,68.1354015969228,48.0446295177991,61.4785695669842,46.8234815179399,54.4698175563857,69.7123458270532,51.4620649058499,89.979838301365,93.8797156198989,69.6642801779762,50.8099261335698,60.9765151444578,78.6384664732821,102.913605658255,92.1522098211939,100.589041125716,29.6013423401156,43.1212770765266,46.7116686746681,52.7622197039161,62.056467292004,56.0347219339201,41.7725656817024,38.6691517786943,29.1145396445614,41.1947808308286,45.7099244924844,40.6737772286249,50.2108981224833,48.8074901734896,82.4522259756021,37.9066949175861,41.971418889008,46.0313667486878,31.6793240030381,41.506534455922,37.3593886622693,39.6859106986852,43.6431625869254,39.6579183568593,36.3574680031674,41.978365199556,43.8293986214275,46.9789751496751,56.1941645344086,72.6942307184642,57.1718734241167,42.9316058183376,32.0636925285548,32.6198933081807,37.2138713189112,29.4248231887593,31.2885375968247,29.3537639555535,40.9136129656614,31.1949279278486,21.2116253381883,27.0271351392018,31.1424443329768,29.973368815808,30.5639466765714,29.1055091148507,24.8715016007264,33.037551773796,28.9158798166018,41.2012875258158,36.5874333317419,30.4802131856453,21.8435681353095,23.7102937383015,41.242209799179,40.7763730334844,34.5074230543902,32.3153695112447,55.7127940587759,52.8584704067748,39.9778324967507,32.2017062779863,43.5197838368155,36.2892137804518,35.0346656476395,40.6956574910665,197.483561714309,55.6681713554018,73.0095228126558,83.8538833532194,84.7261068974653,59.8216123308202,128.836323422278,74.9417700266059,52.1832190745655,51.4412202113148,56.1264280579075,64.1142574561303,64.1159707394874,61.9210019449997,64.2603839436273,68.7812462332106,58.6344605888195,41.9743498777402,44.0436081300698,62.4048602233669,136.748536268293,137.63753521698,122.887737569088,146.980064900242,89.7728793489199,66.0283300656162,93.4207500419543,60.7279384047923,82.1820066806301,111.127243437871,93.8592308864312,115.561360069214,77.1236101852216,128.682078121054,78.5837689445307,73.4936763777977,96.3231008566269,107.994409783506,73.591985983624,99.6728942546535,83.3567934883353,206.895255374619,190.012329432679,91.5797509499322,84.4852317882041,62.0489507156441,73.22227698971,65.3987495307295,58.5202830627289,81.8589296207768,88.6016664556551,50.813514973935,67.5327946817493,87.4272261732276,64.0770660204758,90.8144565869588,72.5981664844799,57.643072231114,76.4792188234285,61.6109567268005,52.605935554234,62.1228497825516,68.1485095789834,72.4726162583602,78.395201761879,51.7132475882543,72.2247210418601,60.5881457213847,59.3440630268536,131.973397481014,57.4894513452991,56.7292704025203,69.4407785289401,113.596287348515,96.1360989729035,56.7002422228186,81.5792659862821,56.7160915800105,61.7100346769685,49.9724289835448,54.4664985980074,56.4171260638676,82.3389708615127,63.1219323111791,68.8632368426882,56.8776239653067,90.4215407895923,64.8754799807374,41.2383545917501,72.7407255684654,63.1917074679574,95.0092286286648,65.1112674472272,84.0684711260341,111.825909442242,145.983539053003,47.935666508931,47.9757761323777,44.9670558905036,42.5010325563019,62.5755710171558,81.3899510739101,62.5798129319264,41.1674200443447,73.2115083168147,50.1517362274537,41.869009936836,51.8183784174516,59.0046415273356,60.493768500754,50.5146395114364,56.2128965758408,61.2158197306629,47.7302830886982,52.5873526535927,39.6289571654782,105.556230011325,58.9015449974472,61.73610169971,48.5128747572288,50.7020139287323,75.6776956841772,53.1710916013264,26.487785964879,98.6367277115771,75.1467009107542,80.9957106315657,65.1930168894193,91.4813648945841,84.3480735394205,80.8004597169605,62.3960871167747,66.3924173316257,91.8168807402608,121.048363757132,65.5423672835275,45.3725802325079,63.3546326941212,26.8669495306154,22.3206402144667,55.152609363577,62.4791387921765,64.6545555955968,105.919232405058,130.522113610514,122.635459114664,63.765668164428,63.3581985960437,79.7435972663639,146.813644892991,66.8287614160386,81.0652931764419,75.9512154507387,76.3766722229599,73.1495742245787,72.1958124305145,60.9530725492244,44.4788359659034,40.2055496469995,54.662436527593,70.8849552923834,96.6569947057009,102.450616175821,50.4567406448136,53.51849032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| |||
|short_description=p1@PAFAH1B2 | |||
}} |
Latest revision as of 20:23, 15 September 2015
Short description: | p1@PAFAH1B2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PAFAH1B2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000304808, ENST00000419197, ENST00000529887, NM_001184746, NM_001184747, NM_001184748, NM_002572_5end |
EntrezGene: | PAFAH1B2 |
HGNC: | 8575 |
UniProt: | P68402E9PEJ5A8DPS6A8DPS7E9PLP3Q6IBR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic cell | 3.80e-08 | 250 |
blood vessel endothelial cell | 6.04e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 6.04e-07 | 18 |