FFCP PHASE1:Hg19::chr12:91505206..91505228,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4060 | |EntrezGene=4060 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6724 | |HGNC=6724 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000546642_5end | |association_with_transcript=0bp_to_ENST00000546642_5end | ||
|cluster_id=chr12:91505206..91505228,- | |||
|coexpression_cluster_id=C1371 | |||
|description=CAGE_peak_2_at_LUM_5end | |description=CAGE_peak_2_at_LUM_5end | ||
|id=chr12:91505206..91505228,- | |id=chr12:91505206..91505228,- | ||
|ontology_enrichment_celltype=CL:0000055!6.13e-23!180;CL:0000057!6.09e-16!75;CL:0002620!1.00e-09!23;CL:0000680!2.04e-08!57;CL:0000056!2.04e-08!57;CL:0000355!2.04e-08!57;CL:0000187!8.81e-08!54;CL:0000499!6.82e-07!27 | |ontology_enrichment_celltype=CL:0000055!6.13e-23!180;CL:0000057!6.09e-16!75;CL:0002620!1.00e-09!23;CL:0000680!2.04e-08!57;CL:0000056!2.04e-08!57;CL:0000355!2.04e-08!57;CL:0000187!8.81e-08!54;CL:0000499!6.82e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.78e-10;23!CL:0000134;1.17e-08;55!CL:0000723;4.66e-08;61!CL:0000048;1.78e-07;58!CL:0000349;2.00e-07;19!CL:0000499;3.93e-07;28!CL:0002334;5.17e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.81e-17,76;CL:0002620,1.58e-10,23;CL:0000680,1.26e-07,58;CL:0000056,1.26e-07,58;CL:0000355,1.26e-07,58;CL:0000349,2.04e-07,19;CL:0000499,3.42e-07,28;CL:0002334,5.05e-07,12;CL:0000187,5.74e-07,55;CL:0000136,8.57e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.54e-11!83;UBERON:0002329!1.54e-11!83;UBERON:0003077!1.54e-11!83;UBERON:0003059!1.54e-11!83;UBERON:0007282!1.54e-11!83;UBERON:0009618!1.54e-11!83;UBERON:0007285!1.54e-11!83;UBERON:0004290!3.14e-10!70;UBERON:0000468!9.64e-10!659;UBERON:0002385!1.44e-09!63;UBERON:0001015!1.44e-09!63;UBERON:0000383!1.44e-09!63;UBERON:0003104!2.28e-09!238;UBERON:0009142!2.28e-09!238;UBERON:0001134!6.94e-09!61;UBERON:0002036!6.94e-09!61;UBERON:0003082!6.94e-09!61;UBERON:0000486!1.63e-08!82;UBERON:0004923!2.12e-08!57;UBERON:0000481!2.30e-08!347;UBERON:0005256!2.67e-08!143;UBERON:0002199!1.11e-07!45;UBERON:0002416!1.11e-07!45;UBERON:0007100!1.19e-07!27;UBERON:0003102!2.24e-07!95;UBERON:0000948!3.23e-07!24;UBERON:0005498!3.23e-07!24;UBERON:0004140!3.23e-07!24;UBERON:0009881!3.23e-07!24;UBERON:0004141!3.23e-07!24;UBERON:0003084!3.23e-07!24;UBERON:0007005!3.23e-07!24;UBERON:0004139!3.23e-07!24;UBERON:0004291!3.23e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0007100;4.24e-07;25!UBERON:0004457;6.18e-07;9!UBERON:0000042;6.18e-07;9!UBERON:0002384;6.99e-07;198!UBERON:0000478;8.76e-07;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007524,9.31e-10,73;UBERON:0002329,1.23e-09,71;UBERON:0003059,1.23e-09,71;UBERON:0007282,1.23e-09,71;UBERON:0004290,1.23e-09,71;UBERON:0009618,1.23e-09,71;UBERON:0003077,2.88e-09,72;UBERON:0007285,2.88e-09,72;UBERON:0002199,3.29e-09,46;UBERON:0002416,3.29e-09,46;UBERON:0002385,6.73e-09,64;UBERON:0001015,6.73e-09,64;UBERON:0000383,6.73e-09,64;UBERON:0003104,3.24e-08,160;UBERON:0009142,3.24e-08,160;UBERON:0001134,3.38e-08,62;UBERON:0002036,3.38e-08,62;UBERON:0003082,3.38e-08,62;UBERON:0002097,5.54e-08,41;UBERON:0000486,6.36e-08,83;UBERON:0005256,6.87e-08,122;UBERON:0003102,1.11e-07,99;UBERON:0004923,1.37e-07,66;UBERON:0000479,1.47e-07,773;UBERON:0007100,1.79e-07,27;UBERON:0007503,2.50e-07,78;UBERON:0000948,5.56e-07,24;UBERON:0005498,5.56e-07,24;UBERON:0004140,5.56e-07,24;UBERON:0009881,5.56e-07,24;UBERON:0004141,5.56e-07,24;UBERON:0003084,5.56e-07,24;UBERON:0007005,5.56e-07,24;UBERON:0004139,5.56e-07,24;UBERON:0004291,5.56e-07,24;UBERON:0000478,8.91e-07,24 | |||
|phase1_expression=64.4958246410476,29.7599728208467,125.449419645414,31.0227224894704,109.505468134686,13.9574163856059,60.7919707603945,7.58063848112197,3.91778442299758,0.491467873003018,0,10.2667444901181,12.1332809985089,21.0402800032079,5.63375538737457,6.05092631806598,0.602694528023977,2.92124036154949,2.92759679274304,1.10808952269109,0.408001382488506,0,0.572471974262113,0,0.376627918784408,0,0,0,0,0,11.7660253720218,0,0,0,0,0,0,0,0,0.217010870715852,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,0,0,0,0,0,3.02699751316684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.954053754535364,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,302.320514229312,31.5229404060709,11.1240428803871,429.389713032865,299.298732649626,1025.36850772367,593.28331650012,1174.24994204026,1.60709189178915,4.65631734671384,6.76327849837071,37.2635469790992,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,461.189971173256,3.67228483827281,57.465584472937,55.9331410460187,10.2853830837524,43.7328528111,1.06748995729705,12.8267125176923,68.7776388233484,19.6677581221745,26.6442902074938,4.99479511228274,13.25204626304,0.234321431833797,1.5608003841516,1.71141546463335,8.07022874979726,4.3450764498193,3.88495066483516,2.66856532734272,7.55370433643105,0.491337269247072,5.57959218349133,77.2201857233335,15.5778165445491,2.73048408581408,2.87447256726495,13.6352252302794,3.75355559615892,2.21651292387346,50.4824264012964,30.955267375701,14.4228536550333,23.1401653646443,194.996533993793,736.986548812876,177.810865072872,71.7217719641721,131.288922249771,130.108472723043,269.31109111181,33.7552664482532,18.7079049909501,178.470678390589,618.483268977609,47.0390025342743,566.595309656517,234.853140968629,67.3155551472636,0,0,0,0,0.132529768321485,15.5699883445155,3.93912009058408,2.01856680700503,0,197.126410735568,106.777995740019,5.52539685409922,34.8275946023984,23.1001434134267,67.434876022711,51.5869151638991,33.500533153804,68.1616751486195,54.4698610231015,40.0987346297753,55.6853302701479,53.3722385140941,41.1679457932638,0,0,6.9967581926338,7.3504355692771,0,0.982827216677626,10.0434284135839,0,1.10689594688802,2.91665277507493,0,0,0,0.0925884451585296,0,0,4.3299402607582,5.10093781890338,107.89859000272,0.144366447761074,0,0,0,0,0,0,0,2.81201501960331,0.503946384596579,0.283550194484773,0,0,0,6.40462209264727,5.01876073875388,1.03664057770386,0.288239906833923,0.37872730027914,1.58744735730423,0,0,1.71072446022705,1.13110241973656,0,0,1.56983518083505,1.74384027533312,3.9602674343313,74.2019648449644,3.57656445851882,8.45302752556,37.2313363218819,17.6812642749322,0.257207374262142,0,0,191.161577520943,128.058698872381,10.70212437815,13.6809197403369,185.514597243609,63.3561498346743,13.5647719676814,40.0905390956135,2.39935178836937,0,0,0,3.83399768786532,4.59447743336456,8.5582143024431,35.3266388268893,4.31500277355805,38.1399851700978,0,0,0,0,0.76228387266739,1.30139853857622,0,0.502548796003046,0,0,0,1.24324654030811,46.500075361554,7.00238729483548,0.542530047399471,28.9079497527822,81.8989058578972,20.9744211995133,21.6711617736519,23.4737957787621,136.444502433591,18.6251528326509,27.2332495399529,3.68738337083406,374.729029200841,0.587403472388222,0,0,0,0,4.54691357169389,43.2732142727292,26.6103458130119,259.272659170622,267.637681414381,166.431435998813,102.255041106049,243.572650555751,128.522282993742,5.93672265779964,21.5893571323718,56.6421903748875,50.4260737924788,20.2509227381612,30.5633295349693,0.241718899183244,0,0,252.017713721312,45.8869743376927,46.8114161405144,0,0,0,0,0,0,0,0.215915916102139,0,0.541892875087706,0,0,0,0,0.877039506583738,1.5686127061494,0,0.656029291399411,0,373.523667222993,34.7963966309705,60.8920109413939,0,0,80.3419649220798,4.54352375972973,2.15668063960502,3.22357716924872,5.09995318192763,29.433147093907,4.93056759308377,3.74997160630844,44.9611780016024,0,0,0,0,1.85938219718914,71.7772150773859,3.485186350803,15.7097125889805,0.532306030317022,2.60979897622522,1.11194531462352,0.286249773483982,42.4260541070021,19.2991449078423,53.9483448804424,1.27948895655667,14.5499255931533,1.90921948755562,0,215.127459269644,279.478696271304,143.848943264083,0.202182481573316,1.58510321173008,0.421258456238981,4.8763373908959,6.58026422004468,0,53.7809650947464,211.825337066662,7.910568163417,2.2054613741845,13.9322184800656,2.63070531152258,4.05142873986681,32.138842850285,0.405820753925408,4.957175969596,1.40847801266121,101.105003303856,74.0797769238933,1.07001315444375,57.8260534435074,93.7317900721629,133.69372654172,0,1.04980416073495,0,0,0,361.512194982832,0,0,0,0,0,0,0,0,0,0,0.540031437238115,0,0,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.79560539918633,64.3170907003615,0.121360521749513,0,0,21.4870036263921,392.587308060748,3.07160702099232,0,0,0,0,0,28.691710308154,36.7457607656426,0,0.102268682502155,0,162.05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| ||
|short_description=p2@LUM | |short_description=p2@LUM | ||
}} | }} |
Latest revision as of 21:05, 15 September 2015
Short description: | p2@LUM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LUM_5end |
Coexpression cluster: | C1371_tenocyte_Chondrocyte_placenta_Fibroblast_skin_mesenchymal_chorionic |
Association with transcript: | 0bp_to_ENST00000546642_5end |
EntrezGene: | LUM |
HGNC: | 6724 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.81e-17 | 76 |
skin fibroblast | 1.58e-10 | 23 |
muscle precursor cell | 1.26e-07 | 58 |
myoblast | 1.26e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.26e-07 | 58 |
extraembryonic cell | 2.04e-07 | 19 |
stromal cell | 3.42e-07 | 28 |
preadipocyte | 5.05e-07 | 12 |
muscle cell | 5.74e-07 | 55 |
fat cell | 8.57e-07 | 15 |