FFCP PHASE1:Hg19::chr16:2802442..2802471,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23524 | |EntrezGene=23524 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16639 | |HGNC=16639 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UQ35,F5GWZ7 | |UniProt=Q9UQ35,F5GWZ7 | ||
|association_with_transcript=112bp_to_ENST00000301740,ENST00000382301,ENST00000396975,ENST00000544933,NM_016333,uc002crj.1,uc002crk.2_5end | |association_with_transcript=112bp_to_ENST00000301740,ENST00000382301,ENST00000396975,ENST00000544933,NM_016333,uc002crj.1,uc002crk.2_5end | ||
|cluster_id=chr16:2802442..2802471,+ | |||
|description=CAGE_peak_5_at_SRRM2_5end | |description=CAGE_peak_5_at_SRRM2_5end | ||
|id=chr16:2802442..2802471,+ | |id=chr16:2802442..2802471,+ | ||
|ontology_enrichment_celltype=CL:0000115!2.45e-08!35;CL:0002078!3.55e-08!44 | |ontology_enrichment_celltype=CL:0000115!2.45e-08!35;CL:0002078!3.55e-08!44 | ||
|ontology_enrichment_celltype_v019=CL:0000115;4.00e-07;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,2.48e-08,36;CL:0002078,4.40e-08,45 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |ontology_enrichment_uberon= | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p5@SRRM2 | |short_description=p5@SRRM2 | ||
}} | }} |
Latest revision as of 22:35, 15 September 2015
Short description: | p5@SRRM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SRRM2_5end |
Coexpression cluster: | NA |
Association with transcript: | 112bp_to_ENST00000301740, ENST00000382301, ENST00000396975, ENST00000544933, NM_016333, uc002crj.1, uc002crk.2_5end |
EntrezGene: | SRRM2 |
HGNC: | 16639 |
UniProt: | Q9UQ35F5GWZ7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 2.48e-08 | 36 |
meso-epithelial cell | 4.40e-08 | 45 |