FFCP PHASE1:Hg19::chr3:149688909..149688970,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5217 | |EntrezGene=5217 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8882 | |HGNC=8882 | ||
|TSSclassifier=strong | |||
|UniProt=P35080 | |UniProt=P35080 | ||
|association_with_transcript=-13bp_to_ENST00000239940_5end | |association_with_transcript=-13bp_to_ENST00000239940_5end | ||
|cluster_id=chr3:149688909..149688970,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_PFN2_5end | |description=CAGE_peak_2_at_PFN2_5end | ||
|id=chr3:149688909..149688970,- | |id=chr3:149688909..149688970,- | ||
|ontology_enrichment_celltype=CL:0000055!1.64e-14!180;CL:0000133!9.33e-14!59;CL:0000221!7.94e-12!71;CL:0002321!4.00e-10!248;CL:0000220!8.60e-10!246;CL:0002319!9.10e-10!25;CL:0000333!2.15e-08!41 | |ontology_enrichment_celltype=CL:0000055!1.64e-14!180;CL:0000133!9.33e-14!59;CL:0000221!7.94e-12!71;CL:0002321!4.00e-10!248;CL:0000220!8.60e-10!246;CL:0002319!9.10e-10!25;CL:0000333!2.15e-08!41 | ||
|ontology_enrichment_celltype_v019=CL:0002319;6.81e-10;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000133,7.47e-14,59;CL:0000221,4.78e-12,72;CL:0002321,6.57e-10,250;CL:0002319,7.83e-10,25;CL:0000333,1.90e-08,41 | |||
|ontology_enrichment_development_v019=CL:0000133;8.37e-08;59!UBERON:0006601;3.24e-07;82 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000073!1.00e-35!94;UBERON:0001016!1.00e-35!94;UBERON:0005743!4.89e-32!86;UBERON:0001017!1.16e-31!82;UBERON:0000924!2.53e-31!173;UBERON:0006601!2.53e-31!173;UBERON:0004121!1.09e-30!169;UBERON:0000475!5.32e-30!365;UBERON:0002346!2.94e-27!90;UBERON:0003075!7.34e-27!86;UBERON:0007284!7.34e-27!86;UBERON:0000955!8.08e-26!69;UBERON:0006238!8.08e-26!69;UBERON:0000033!2.36e-25!123;UBERON:0001049!3.28e-25!57;UBERON:0005068!3.28e-25!57;UBERON:0006241!3.28e-25!57;UBERON:0007135!3.28e-25!57;UBERON:0000153!8.71e-23!129;UBERON:0007811!8.71e-23!129;UBERON:0003056!9.71e-23!61;UBERON:0002616!1.02e-22!59;UBERON:0000119!4.96e-21!312;UBERON:0000483!1.84e-20!309;UBERON:0002780!1.90e-20!41;UBERON:0001890!1.90e-20!41;UBERON:0006240!1.90e-20!41;UBERON:0000481!3.53e-20!347;UBERON:0003080!1.04e-19!42;UBERON:0001893!1.49e-19!34;UBERON:0001869!2.73e-19!32;UBERON:0002020!3.73e-19!34;UBERON:0003528!3.73e-19!34;UBERON:0002791!7.04e-19!33;UBERON:0000956!4.52e-16!25;UBERON:0000203!4.52e-16!25;UBERON:0002619!1.17e-14!22;UBERON:0001950!1.71e-13!20;UBERON:0000468!1.92e-13!659;UBERON:0000922!4.16e-13!612;UBERON:0000064!1.52e-12!219;UBERON:0000025!1.56e-11!194;UBERON:0002050!2.80e-11!605;UBERON:0005423!2.80e-11!605;UBERON:0000923!3.85e-11!604;UBERON:0005291!3.85e-11!604;UBERON:0006598!3.85e-11!604;UBERON:0002532!3.85e-11!604;UBERON:0000467!1.28e-09!625;UBERON:0004111!1.40e-09!241;UBERON:0000480!1.94e-09!626;UBERON:0000477!2.44e-09!286;UBERON:0003076!9.95e-07!15;UBERON:0003057!9.95e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;1.06e-17;32!UBERON:0001893;2.31e-17;34!UBERON:0003528;4.05e-17;34!UBERON:0002020;4.05e-17;34!UBERON:0002791;4.74e-17;32!UBERON:0000956;3.23e-16;25!UBERON:0000203;3.23e-16;25!UBERON:0002780;7.44e-15;41!UBERON:0001890;7.44e-15;41!UBERON:0002619;8.71e-15;22!UBERON:0000073;3.66e-14;53!UBERON:0002616;3.66e-14;53!UBERON:0001950;1.30e-13;20!UBERON:0000955;1.17e-12;68!UBERON:0001017;1.33e-12;75!UBERON:0001016;6.80e-12;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,3.04e-36,89;UBERON:0001017,1.53e-32,81;UBERON:0004121,3.90e-32,171;UBERON:0000924,3.90e-32,171;UBERON:0006601,3.90e-32,171;UBERON:0002346,1.49e-28,86;UBERON:0003075,3.41e-28,82;UBERON:0007284,3.41e-28,82;UBERON:0000955,1.24e-26,68;UBERON:0006238,1.24e-26,68;UBERON:0001049,4.10e-26,56;UBERON:0005068,4.10e-26,56;UBERON:0006241,4.10e-26,56;UBERON:0007135,4.10e-26,56;UBERON:0000073,6.39e-25,53;UBERON:0002616,6.39e-25,53;UBERON:0010314,1.99e-24,132;UBERON:0003056,4.19e-24,61;UBERON:0010371,9.90e-24,104;UBERON:0000119,1.82e-21,309;UBERON:0000483,6.86e-21,306;UBERON:0002780,1.34e-20,41;UBERON:0001890,1.34e-20,41;UBERON:0003080,1.34e-20,41;UBERON:0006240,1.34e-20,41;UBERON:0001893,1.07e-19,34;UBERON:0001869,1.98e-19,32;UBERON:0003528,2.71e-19,34;UBERON:0002020,2.71e-19,34;UBERON:0011216,2.91e-19,223;UBERON:0002791,1.35e-18,32;UBERON:0000956,3.46e-16,25;UBERON:0000203,3.46e-16,25;UBERON:0002619,9.23e-15,22;UBERON:0001950,1.38e-13,20;UBERON:0000922,2.01e-12,592;UBERON:0000025,1.29e-11,192;UBERON:0005423,8.66e-10,581;UBERON:0004111,9.57e-10,240;UBERON:0000923,3.26e-08,560;UBERON:0010316,3.26e-08,560;UBERON:0005291,3.26e-08,560;UBERON:0006598,3.26e-08,560;UBERON:0010317,3.26e-08,560;UBERON:0002532,3.26e-08,560;UBERON:0002050,5.56e-08,564;UBERON:0003076,9.04e-07,15;UBERON:0003057,9.04e-07,15 | |||
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| ||
|short_description=p2@PFN2 | |short_description=p2@PFN2 | ||
}} | }} |
Latest revision as of 22:58, 15 September 2015
Short description: | p2@PFN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PFN2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | -13bp_to_ENST00000239940_5end |
EntrezGene: | PFN2 |
HGNC: | 8882 |
UniProt: | P35080 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neurectodermal cell | 7.47e-14 | 59 |
ectodermal cell | 4.78e-12 | 72 |
embryonic cell | 6.57e-10 | 250 |
neural cell | 7.83e-10 | 25 |
migratory neural crest cell | 1.90e-08 | 41 |