FFCP PHASE1:Hg19::chr11:117957672..117957682,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=100526771 | |EntrezGene=100526771 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-164bp_to_ENST00000527329,ENST00000527695,NR_038318,uc001prx.1,uc001pry.1,uc001prz.1,uc001psa.1,uc009yzs.1_5end | |association_with_transcript=-164bp_to_ENST00000527329,ENST00000527695,NR_038318,uc001prx.1,uc001pry.1,uc001prz.1,uc001psa.1,uc009yzs.1_5end | ||
|cluster_id=chr11:117957672..117957682,- | |||
|description=CAGE_peak_2_at_LOC100526771_5end | |description=CAGE_peak_2_at_LOC100526771_5end | ||
|id=chr11:117957672..117957682,- | |id=chr11:117957672..117957682,- | ||
|ontology_enrichment_celltype=CL:0000242!2.85e-22!2;CL:0000080!8.14e-17!6;CL:0000312!1.76e-09!5;CL:0000240!4.82e-08!6;CL:0000311!4.82e-08!6;CL:0000079!4.82e-08!6;CL:0000237!4.82e-08!6;CL:0000036!4.82e-08!6;CL:0000357!4.82e-08!6;CL:0000114!4.82e-08!6;CL:0000945!3.37e-07!24;CL:0000826!3.37e-07!24 | |ontology_enrichment_celltype=CL:0000242!2.85e-22!2;CL:0000080!8.14e-17!6;CL:0000312!1.76e-09!5;CL:0000240!4.82e-08!6;CL:0000311!4.82e-08!6;CL:0000079!4.82e-08!6;CL:0000237!4.82e-08!6;CL:0000036!4.82e-08!6;CL:0000357!4.82e-08!6;CL:0000114!4.82e-08!6;CL:0000945!3.37e-07!24;CL:0000826!3.37e-07!24 | ||
|ontology_enrichment_celltype_v019=CL:0000123;1.43e-15;2!CL:0000242;1.43e-15;2!CL:0002535;2.37e-15;2!CL:0000312;5.23e-07;5 | |ontology_enrichment_celltype_v019=CL:0000123;1.43e-15;2!CL:0000242;1.43e-15;2!CL:0002535;2.37e-15;2!CL:0000312;5.23e-07;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0000242,1.78e-15,2;CL:0002535,2.05e-15,2;CL:0000312,5.70e-07,5 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4960!2.63e-12!1;DOID:0070004!2.63e-12!1;DOID:0060058!7.87e-10!10 | |ontology_enrichment_disease=DOID:4960!2.63e-12!1;DOID:0070004!2.63e-12!1;DOID:0060058!7.87e-10!10 | ||
|ontology_enrichment_disease_v019=DOID:4960;1.15e-29;1!DOID:0070004;1.15e-29;1!DOID:4362;6.39e-07;5 | |ontology_enrichment_disease_v019=DOID:4960;1.15e-29;1!DOID:0070004;1.15e-29;1!DOID:4362;6.39e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:4960,7.48e-30,1;DOID:0070004,7.48e-30,1;DOID:4362,6.04e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0003127!3.93e-22!2;UBERON:0002331!2.57e-10!10;UBERON:0000358!2.57e-10!10;UBERON:0000307!2.57e-10!10;UBERON:0000091!2.57e-10!10;UBERON:0000087!2.57e-10!10;UBERON:0007806!2.57e-10!10;UBERON:0008780!2.57e-10!10;UBERON:0005728!2.57e-10!10;UBERON:0000178!4.88e-07!15;UBERON:0000179!4.88e-07!15;UBERON:0000463!4.88e-07!15;UBERON:0003126!5.67e-07!7;UBERON:0001005!5.67e-07!7 | |ontology_enrichment_uberon=UBERON:0003127!3.93e-22!2;UBERON:0002331!2.57e-10!10;UBERON:0000358!2.57e-10!10;UBERON:0000307!2.57e-10!10;UBERON:0000091!2.57e-10!10;UBERON:0000087!2.57e-10!10;UBERON:0007806!2.57e-10!10;UBERON:0008780!2.57e-10!10;UBERON:0005728!2.57e-10!10;UBERON:0000178!4.88e-07!15;UBERON:0000179!4.88e-07!15;UBERON:0000463!4.88e-07!15;UBERON:0003126!5.67e-07!7;UBERON:0001005!5.67e-07!7 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;3.92e-26;10!UBERON:0000178;1.04e-17;15!UBERON:0000179;1.04e-17;15!UBERON:0000463;1.04e-17;15!UBERON:0006955;2.37e-15;2!UBERON:0004801;2.37e-15;2!UBERON:0002390;2.38e-14;32!UBERON:0000478;2.35e-11;24!UBERON:0002193;2.95e-07;42 | |ontology_enrichment_uberon_v019=UBERON:0002331;3.92e-26;10!UBERON:0000178;1.04e-17;15!UBERON:0000179;1.04e-17;15!UBERON:0000463;1.04e-17;15!UBERON:0006955;2.37e-15;2!UBERON:0004801;2.37e-15;2!UBERON:0002390;2.38e-14;32!UBERON:0000478;2.35e-11;24!UBERON:0002193;2.95e-07;42 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,3.92e-26,10;UBERON:0000358,3.92e-26,10;UBERON:0000307,3.92e-26,10;UBERON:0000091,3.92e-26,10;UBERON:0000087,3.92e-26,10;UBERON:0007010,3.92e-26,10;UBERON:0007806,3.92e-26,10;UBERON:0008780,3.92e-26,10;UBERON:0005728,3.92e-26,10;UBERON:0000178,1.04e-17,15;UBERON:0000179,1.04e-17,15;UBERON:0000463,1.04e-17,15;UBERON:0006955,2.05e-15,2;UBERON:0004801,2.05e-15,2;UBERON:0000478,2.35e-11,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.314843125254717,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72371686620732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07564790076435,1.72989514525104,2.29728288912002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,2.02889440055155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41100971525142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717222053926764,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.314843125254717,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0,0,0,0,0,0,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72371686620732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.07564790076435,1.72989514525104,2.29728288912002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.314408610199332,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.468334905806882,2.02889440055155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.41100971525142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0.196308467114945,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.717222053926764,0.665320713092027,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p2@LOC100526771 | |short_description=p2@LOC100526771 | ||
}} | }} |
Latest revision as of 23:07, 15 September 2015
Short description: | p2@LOC100526771 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LOC100526771_5end |
Coexpression cluster: | NA |
Association with transcript: | -164bp_to_ENST00000527329, ENST00000527695, NR_038318, uc001prx.1, uc001pry.1, uc001prz.1, uc001psa.1, uc009yzs.1_5end |
EntrezGene: | LOC100526771 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 1.78e-15 | 2 |
epithelial cell of cervix | 2.05e-15 | 2 |
keratinocyte | 5.70e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 3.92e-26 | 10 |
blastocyst | 3.92e-26 | 10 |
blastula | 3.92e-26 | 10 |
bilaminar disc | 3.92e-26 | 10 |
inner cell mass | 3.92e-26 | 10 |
cleaving embryo | 3.92e-26 | 10 |
connecting stalk | 3.92e-26 | 10 |
inner cell mass derived epiblast | 3.92e-26 | 10 |
extraembryonic mesoderm | 3.92e-26 | 10 |
blood | 1.04e-17 | 15 |
haemolymphatic fluid | 1.04e-17 | 15 |
organism substance | 1.04e-17 | 15 |
uterine epithelium | 2.05e-15 | 2 |
cervix epithelium | 2.05e-15 | 2 |
extraembryonic structure | 2.35e-11 | 24 |
Ontology term | p-value | n |
---|---|---|
bone marrow cancer | 7.48e-30 | 1 |
myeloma | 7.48e-30 | 1 |
cervical cancer | 6.04e-07 | 5 |