FFCP PHASE1:Hg19::chr12:104443890..104443971,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=83468 | |EntrezGene=83468 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24890 | |HGNC=24890 | ||
|TSSclassifier=strong | |||
|UniProt=Q9H1C3,F8VZP2,F8VU19 | |UniProt=Q9H1C3,F8VZP2,F8VU19 | ||
|association_with_transcript=0bp_to_ENST00000360814,ENST00000546851,ENST00000547583,NM_031302_5end | |association_with_transcript=0bp_to_ENST00000360814,ENST00000546851,ENST00000547583,NM_031302_5end | ||
|cluster_id=chr12:104443890..104443971,- | |||
|coexpression_cluster_id=C811 | |||
|description=CAGE_peak_1_at_GLT8D2_5end | |description=CAGE_peak_1_at_GLT8D2_5end | ||
|id=chr12:104443890..104443971,- | |id=chr12:104443890..104443971,- | ||
|ontology_enrichment_celltype=CL:0000055!3.66e-38!180;CL:0000057!5.44e-24!75;CL:0000680!3.95e-17!57;CL:0000056!3.95e-17!57;CL:0000355!3.95e-17!57;CL:0000187!1.57e-16!54;CL:0000393!1.41e-15!60;CL:0000211!1.41e-15!60;CL:0000183!4.19e-15!59;CL:0000192!2.65e-13!42;CL:0000514!2.65e-13!42;CL:0000359!6.51e-11!32;CL:0002620!1.44e-10!23;CL:0002334!3.18e-07!12;CL:0000222!4.86e-07!119;CL:0002494!8.61e-07!16 | |ontology_enrichment_celltype=CL:0000055!3.66e-38!180;CL:0000057!5.44e-24!75;CL:0000680!3.95e-17!57;CL:0000056!3.95e-17!57;CL:0000355!3.95e-17!57;CL:0000187!1.57e-16!54;CL:0000393!1.41e-15!60;CL:0000211!1.41e-15!60;CL:0000183!4.19e-15!59;CL:0000192!2.65e-13!42;CL:0000514!2.65e-13!42;CL:0000359!6.51e-11!32;CL:0002620!1.44e-10!23;CL:0002334!3.18e-07!12;CL:0000222!4.86e-07!119;CL:0002494!8.61e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.72e-11;23!CL:0000359;9.79e-11;32!CL:0000057;6.34e-10;73!CL:0000192;9.68e-10;43!CL:0000187;2.28e-09;55!CL:0000393;8.66e-09;61!CL:0000211;8.66e-09;61!CL:0002320;7.12e-08;188!CL:0000134;1.35e-07;55!CL:0002334;1.51e-07;12!CL:0002494;3.68e-07;16!CL:0000723;4.18e-07;61!CL:0000048;5.20e-07;58!CL:0000499;6.90e-07;28 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.70e-25,76;CL:0000680,8.47e-18,58;CL:0000056,8.47e-18,58;CL:0000355,8.47e-18,58;CL:0000187,3.71e-17,55;CL:0000393,3.42e-16,61;CL:0000211,3.42e-16,61;CL:0000192,9.88e-14,43;CL:0000514,9.88e-14,43;CL:0000359,1.79e-11,32;CL:0002620,4.14e-11,23;CL:0002334,1.45e-07,12;CL:0002494,4.16e-07,16;CL:0000499,6.12e-07,28 | |||
|ontology_enrichment_development_v019=CL:0000514;9.68e-10;43!CL:0000355;2.98e-09;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!2.98e-24!83;UBERON:0002329!2.98e-24!83;UBERON:0003077!2.98e-24!83;UBERON:0003059!2.98e-24!83;UBERON:0007282!2.98e-24!83;UBERON:0009618!2.98e-24!83;UBERON:0007285!2.98e-24!83;UBERON:0004290!1.19e-19!70;UBERON:0000486!6.40e-19!82;UBERON:0002385!1.14e-17!63;UBERON:0001015!1.14e-17!63;UBERON:0000383!1.14e-17!63;UBERON:0001134!1.91e-17!61;UBERON:0002036!1.91e-17!61;UBERON:0003082!1.91e-17!61;UBERON:0000468!8.41e-14!659;UBERON:0005256!6.84e-13!143;UBERON:0000481!1.19e-12!347;UBERON:0003102!1.25e-12!95;UBERON:0004872!3.65e-12!84;UBERON:0000475!4.69e-12!365;UBERON:0003104!9.59e-10!238;UBERON:0009142!9.59e-10!238;UBERON:0002100!1.09e-09!216;UBERON:0000467!2.88e-09!625;UBERON:0000480!4.58e-09!626;UBERON:0004573!5.33e-09!33;UBERON:0004571!5.33e-09!33;UBERON:0001637!5.46e-09!42;UBERON:0003509!5.46e-09!42;UBERON:0004572!5.46e-09!42;UBERON:0002049!1.01e-08!79;UBERON:0007798!1.01e-08!79;UBERON:0007100!1.17e-08!27;UBERON:0000948!1.77e-08!24;UBERON:0005498!1.77e-08!24;UBERON:0004140!1.77e-08!24;UBERON:0009881!1.77e-08!24;UBERON:0004141!1.77e-08!24;UBERON:0003084!1.77e-08!24;UBERON:0007005!1.77e-08!24;UBERON:0004139!1.77e-08!24;UBERON:0004291!1.77e-08!24;UBERON:0002199!4.44e-08!45;UBERON:0002416!4.44e-08!45;UBERON:0001981!5.22e-08!60;UBERON:0007500!5.22e-08!60;UBERON:0004537!5.22e-08!60;UBERON:0006965!5.22e-08!60;UBERON:0002097!5.77e-08!40;UBERON:0001009!1.58e-07!113;UBERON:0000490!1.68e-07!138;UBERON:0000119!1.68e-07!312;UBERON:0004535!3.25e-07!110;UBERON:0000922!4.31e-07!612;UBERON:0000483!4.98e-07!309;UBERON:0000479!5.72e-07!787 | |||
|ontology_enrichment_uberon_v019=UBERON:0002385;1.21e-08;31!UBERON:0001015;1.21e-08;31!UBERON:0000383;1.21e-08;31!UBERON:0007100;1.41e-08;25!UBERON:0004573;2.10e-08;33!UBERON:0004571;2.10e-08;33!UBERON:0000948;2.19e-08;22!UBERON:0002384;3.09e-08;198!UBERON:0002204;3.92e-07;70!UBERON:0002097;4.08e-07;41!UBERON:0000075;9.68e-07;16 | |||
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|phase1_expression=17.4411244099734,14.7729361484778,22.2707958471634,12.0087958023756,9.83314407740033,18.3191090061077,0,3.79031924056099,2.35067065379855,0.245733936501509,0.697801167972428,4.58726881473362,2.37390280405608,31.931719063692,20.8780346708587,13.4465029290355,16.8754467846714,14.6062018077475,13.6621183661342,3.44738962615006,4.08001382488506,0.940364164434263,1.71741592278634,0.684372125364421,2.00868223351684,0,0,0,0,0,0,1.83884244895785,1.204823675113,1.10926203050036,0,0,0,0.553995408531877,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,17.0664806419773,29.51083782696,18.1564837817813,26.0236189716888,21.0561922467074,39.1085601194224,53.2841584524236,20.4386645527107,8.2245290932739,5.76496433402666,4.12823492757692,4.06035134042909,0,0.370784442784429,0,0,0,0,0,0,1.78886166630035,3.4409383804245,1.04142150482278,0,1.25849830862972,0.275118041940067,0.208994966536811,0,0,0.33472061276467,3.22263453687318,3.04108842287405,2.4406205754817,1.47065232138347,0.81014194788176,2.94689103337463,2.02076435363553,1.23872628531654,0,0,0,0,0,0,18.8849341644221,26.4657769378972,19.993786302796,75.438031256938,16.3147455811244,11.2135520028461,6.4049397437823,4.44001587150888,25.8305159381806,18.7247834176866,14.2211855708709,16.0438873303627,13.82822218752,6.56100009134631,7.80400192075801,9.12754914471119,11.2086510413851,5.28455243896942,5.01806127541208,4.77532742787645,28.7857381469399,13.2661062696709,14.4656093646072,17.8200428592308,15.5778165445491,3.64064544775211,1.43723628363248,12.793544660509,14.01327422566,23.2733857006714,24.1437691484461,21.1476579101324,11.7185685947146,6.69249880644124,35.8779271377724,42.0708055972578,20.1335306101584,71.4216808680877,42.8698521631906,41.4801269473463,33.3149172833546,46.7510440308307,31.4721526670672,36.6028972653966,32.9538637139432,20.3674031591703,51.8314005074257,16.4225920111054,17.8038621926012,4.25173876959253,7.63689137654337,4.58887352622406,0.731842236777572,1.72288698817931,1.04574548582567,0.518305275076852,0.252320850875628,1.45990943630332,25.0319251727706,30.8755650332585,13.8134921352481,18.1103491932472,20.2126254867484,10.7659188036258,10.4522507848423,9.15841913557232,9.1543997367887,11.7654899809899,10.2026366217772,10.7865046528132,13.5392810936489,10.0034260806062,1.4763109092493,0,7.8199062152966,5.88034845542168,0,0,2.36315962672562,0,0,7.20584803253807,4.17051084552777,0,0,2.87024179991442,3.9096996637239,8.31947828223663,4.3299402607582,3.4779121492523,15.9675824160717,0.577465791044295,1.38895653772983,2.09279567458058,0,0,0,0,0,6.56136837907439,10.2469098201304,11.4837828766333,10.2992301108276,11.6253575405585,9.58456697913028,0,0,0,0.144119953416961,0,0.190493682876507,0,0,0,0.514137463516618,1.20137223137567,0,11.7737638562629,10.4630416519987,12.9808765903082,16.9345947642689,7.15312891703765,4.22651376278,13.0309677126587,10.4007436911366,4.37252536245642,2.83698264046557,2.66422179016099,10.8663275180192,2.71310802695722,7.40916303102692,5.21177894869976,7.46323092359346,9.50342247520115,21.7036351482902,7.84380112740265,13.8962457743059,0,0,0,6.70949595376431,14.9320516584348,7.13184525203592,13.1750989067497,6.78071864416265,9.49023105171447,0,0,0,0,2.03275699377971,1.30139853857622,2.31986643833309,1.34013012267479,1.91381625495949,0,0,0,23.0660004431983,11.0037514633129,13.8345162086865,8.31883446123229,13.3821741597871,13.8778125229863,7.26276772954822,15.6491971858414,11.3703752027992,8.27784570340039,13.9487375692442,7.92787424729324,24.4142956655313,3.72022199179207,3.43143423810856,0,0,0,1.21251028578504,4.99306318531491,7.25736703991233,26.2994276287903,44.6574342268262,22.733467649079,18.4520374928209,24.5619479552018,14.1551450606375,8.90508398669946,13.7246627484363,23.4381477413328,21.5994420316318,29.0782480342828,14.0614557936551,0.241718899183244,4.81215528727884,1.56537681191024,20.6666006696292,15.4777492805709,15.8660542100903,0,0.616122696835318,0,0,1.05551628892876,0,0.510281115829547,1.94324324491925,0,2.16757150035082,0,0.764628819135115,0.831076008928724,1.11937377361089,0,0,0,0.328014645699706,1.95227036798582,4.6368455241475,1.46511143709349,1.23764249880882,3.44559322797703,0.650060246036521,38.5641431625983,15.080632053571,5.69979883324184,7.21467271212809,4.9621166094431,17.6169201583969,13.0515024522806,5.19882427238216,13.5328694183041,4.95854746082934,5.76570202095319,3.06270509987002,4.4509423576442,4.64845549297286,77.7586496671681,18.8200062943362,16.6338133295088,9.58150854570639,18.2685928335765,18.532421910392,8.87374297800346,16.747126621185,27.8413893752479,9.91277008403889,2.81487570442467,1.28381696410176,19.4103981234821,1.56989728039846,28.2399758405804,10.9814811894422,11.5456154298773,10.3113065602391,15.8510321173008,10.5314614059745,1.95053495635836,28.7581917764916,12.6780176108107,23.068485027949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| ||
|short_description=p1@GLT8D2 | |short_description=p1@GLT8D2 | ||
}} | }} |
Latest revision as of 23:28, 15 September 2015
Short description: | p1@GLT8D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GLT8D2_5end |
Coexpression cluster: | C811_Smooth_Fibroblast_Preadipocyte_Chondrocyte_hepatic_basal_Adipocyte |
Association with transcript: | 0bp_to_ENST00000360814, ENST00000546851, ENST00000547583, NM_031302_5end |
EntrezGene: | GLT8D2 |
HGNC: | 24890 |
UniProt: | Q9H1C3F8VZP2F8VU19 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.70e-25 | 76 |
muscle precursor cell | 8.47e-18 | 58 |
myoblast | 8.47e-18 | 58 |
multi-potent skeletal muscle stem cell | 8.47e-18 | 58 |
muscle cell | 3.71e-17 | 55 |
electrically responsive cell | 3.42e-16 | 61 |
electrically active cell | 3.42e-16 | 61 |
smooth muscle cell | 9.88e-14 | 43 |
smooth muscle myoblast | 9.88e-14 | 43 |
vascular associated smooth muscle cell | 1.79e-11 | 32 |
skin fibroblast | 4.14e-11 | 23 |
preadipocyte | 1.45e-07 | 12 |
cardiocyte | 4.16e-07 | 16 |
stromal cell | 6.12e-07 | 28 |