FFCP PHASE1:Hg19::chr17:48264399..48264490,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1277 | |EntrezGene=1277 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2197 | |HGNC=2197 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-225bp_to_ENST00000510710_5end | |association_with_transcript=-225bp_to_ENST00000510710_5end | ||
|cluster_id=chr17:48264399..48264490,- | |||
|coexpression_cluster_id=C59 | |||
|description=CAGE_peak_11_at_COL1A1_5end | |description=CAGE_peak_11_at_COL1A1_5end | ||
|id=chr17:48264399..48264490,- | |id=chr17:48264399..48264490,- | ||
|ontology_enrichment_celltype=CL:0000055!1.18e-40!180;CL:0000057!2.76e-24!75;CL:0000183!2.50e-16!59;CL:0000680!6.39e-16!57;CL:0000056!6.39e-16!57;CL:0000355!6.39e-16!57;CL:0000187!2.61e-15!54;CL:0000393!3.03e-14!60;CL:0000211!3.03e-14!60;CL:0000192!1.18e-11!42;CL:0000514!1.18e-11!42;CL:0000048!2.76e-09!430;CL:0000723!1.11e-08!436;CL:0000499!2.54e-08!27;CL:0002620!2.58e-08!23;CL:0000034!3.13e-08!444;CL:0000359!7.05e-08!32;CL:0002334!9.51e-08!12;CL:0002371!1.35e-07!591;CL:0000222!1.47e-07!119;CL:0000144!1.73e-07!625;CL:0000327!3.12e-07!14 | |ontology_enrichment_celltype=CL:0000055!1.18e-40!180;CL:0000057!2.76e-24!75;CL:0000183!2.50e-16!59;CL:0000680!6.39e-16!57;CL:0000056!6.39e-16!57;CL:0000355!6.39e-16!57;CL:0000187!2.61e-15!54;CL:0000393!3.03e-14!60;CL:0000211!3.03e-14!60;CL:0000192!1.18e-11!42;CL:0000514!1.18e-11!42;CL:0000048!2.76e-09!430;CL:0000723!1.11e-08!436;CL:0000499!2.54e-08!27;CL:0002620!2.58e-08!23;CL:0000034!3.13e-08!444;CL:0000359!7.05e-08!32;CL:0002334!9.51e-08!12;CL:0002371!1.35e-07!591;CL:0000222!1.47e-07!119;CL:0000144!1.73e-07!625;CL:0000327!3.12e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000134;8.89e-11;55!CL:0000187;3.30e-10;55!CL:0000048;4.27e-10;58!CL:0000723;6.96e-10;61!CL:0000192;7.32e-10;43!CL:0000057;9.65e-10;73!CL:0002320;1.21e-09;188!CL:0002334;1.06e-08;12!CL:0000359;1.43e-08;32!CL:0000499;3.31e-08;28!CL:0000393;8.29e-08;61!CL:0000211;8.29e-08;61!CL:0002620;1.67e-07;23!CL:0000327;1.98e-07;15!CL:0002494;4.40e-07;16!CL:0000034;4.59e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.45e-26,76;CL:0000680,1.43e-18,58;CL:0000056,1.43e-18,58;CL:0000355,1.43e-18,58;CL:0000187,7.22e-18,55;CL:0000048,6.85e-16,427;CL:0000723,7.83e-15,433;CL:0000393,2.51e-14,61;CL:0000211,2.51e-14,61;CL:0000192,1.18e-13,43;CL:0000514,1.18e-13,43;CL:0000034,1.72e-13,441;CL:0000359,6.33e-09,32;CL:0002334,1.15e-08,12;CL:0000499,2.93e-08,28;CL:0000222,6.60e-08,121;CL:0002620,1.68e-07,23;CL:0002320,1.91e-07,361;CL:0000327,1.91e-07,15;CL:0002494,4.91e-07,16 | |||
|ontology_enrichment_development_v019=CL:0000355;3.20e-10;58!CL:0000514;7.32e-10;43 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!6.61e-19!83;UBERON:0002329!6.61e-19!83;UBERON:0003077!6.61e-19!83;UBERON:0003059!6.61e-19!83;UBERON:0007282!6.61e-19!83;UBERON:0009618!6.61e-19!83;UBERON:0007285!6.61e-19!83;UBERON:0004290!5.12e-17!70;UBERON:0001134!7.72e-16!61;UBERON:0002036!7.72e-16!61;UBERON:0003082!7.72e-16!61;UBERON:0002385!9.45e-16!63;UBERON:0001015!9.45e-16!63;UBERON:0000383!9.45e-16!63;UBERON:0005256!1.98e-14!143;UBERON:0000486!3.01e-14!82;UBERON:0002100!6.11e-10!216;UBERON:0000475!4.03e-09!365;UBERON:0003102!4.23e-08!95;UBERON:0002199!7.04e-08!45;UBERON:0002416!7.04e-08!45;UBERON:0001013!1.52e-07!14;UBERON:0004872!1.68e-07!84;UBERON:0000481!6.89e-07!347;UBERON:0000948!8.03e-07!24;UBERON:0005498!8.03e-07!24;UBERON:0004140!8.03e-07!24;UBERON:0009881!8.03e-07!24;UBERON:0004141!8.03e-07!24;UBERON:0003084!8.03e-07!24;UBERON:0007005!8.03e-07!24;UBERON:0004139!8.03e-07!24;UBERON:0004291!8.03e-07!24;UBERON:0003104!8.69e-07!238;UBERON:0009142!8.69e-07!238 | |||
|ontology_enrichment_uberon_v019=UBERON:0002384;7.11e-10;198!UBERON:0001013;1.98e-08;14!UBERON:0002385;2.01e-07;31!UBERON:0001015;2.01e-07;31!UBERON:0000383;2.01e-07;31!UBERON:0000948;5.16e-07;22!UBERON:0002204;5.83e-07;70 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.03e-18,62;UBERON:0002036,1.03e-18,62;UBERON:0003082,1.03e-18,62;UBERON:0007524,1.89e-18,73;UBERON:0002329,2.29e-18,71;UBERON:0003059,2.29e-18,71;UBERON:0007282,2.29e-18,71;UBERON:0004290,2.29e-18,71;UBERON:0009618,2.29e-18,71;UBERON:0002385,3.58e-18,64;UBERON:0001015,3.58e-18,64;UBERON:0000383,3.58e-18,64;UBERON:0007503,6.69e-18,78;UBERON:0003077,8.26e-18,72;UBERON:0007285,8.26e-18,72;UBERON:0003104,1.81e-14,160;UBERON:0009142,1.81e-14,160;UBERON:0000486,1.85e-14,83;UBERON:0005256,5.88e-14,122;UBERON:0000926,5.68e-09,315;UBERON:0004120,5.68e-09,315;UBERON:0006603,5.68e-09,315;UBERON:0004872,8.21e-09,83;UBERON:0001013,1.97e-08,14;UBERON:0002199,3.18e-08,46;UBERON:0002416,3.18e-08,46;UBERON:0002384,5.48e-08,371;UBERON:0002100,8.78e-08,199;UBERON:0000948,1.01e-07,24;UBERON:0005498,1.01e-07,24;UBERON:0004140,1.01e-07,24;UBERON:0009881,1.01e-07,24;UBERON:0004141,1.01e-07,24;UBERON:0003084,1.01e-07,24;UBERON:0007005,1.01e-07,24;UBERON:0004139,1.01e-07,24;UBERON:0004291,1.01e-07,24;UBERON:0000490,1.14e-07,148;UBERON:0003102,7.38e-07,99 | |||
|phase1_expression=29.0685406832891,40.8932000631778,46.0920901393826,24.0175916047513,50.5066036702835,34.0212024399144,91.1879561405918,5.05375898741465,1.82829939739887,1.96587149201207,0.697801167972428,3.49506195408276,18.9912224324487,10.2726072956839,14.5814845320283,6.72325146451775,9.04041792035965,5.84248072309899,2.43966399395253,9.35720041383588,16.116054608296,17.5534644027729,0.572471974262113,1.23186982565596,2.25976751270645,0,0.0821005894499457,0.157421562627358,0,0,0.928896739896456,0,0,0,0,0.142169232487422,0,1.66198622559563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,36.5710299470943,15.4261197731836,14.704194612006,18.4333967716129,41.6110465827788,37.5152484108533,76.3474509169055,41.363963975724,2.26883561193763,9.53436409089025,8.0808002837676,0.654895377488563,0.364295288292542,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183201743930407,0,0,0,92.4367830153292,21.2739259596494,9.1362334761121,120.184544093753,31.5654860156538,11.2135520028461,23.4847790605351,76.7136075577367,3.7345324247972,4.04132016209064,4.25000948094993,28.4551963972471,26.5040925260799,2.10889288650417,0.936480230490962,0.570471821544449,3.43731965269142,1.64408298101271,0.971237666208789,1.12360645361799,3.0623125688234,4.66770405784718,4.64966015290945,60.5881457213847,91.488763833066,28.2150022200788,43.1170885089743,1.0100166837244,4.12891115577482,1.93944880838928,24.1437691484461,37.0850232916814,33.0523729594513,7.0327953559213,30.1374587957288,41.0030186531649,27.3392152495835,40.5122979713943,18.2402976752037,35.2967539862512,21.775672190796,28.1856474842915,19.1950900167561,19.6898343910409,19.1463789175983,23.9236164091842,47.9262949897429,11.1834829032681,7.96934783859292,0,0.272746120590835,0.286804595389004,0.365921118388786,0,0.232387885739037,0.518305275076852,0.504641701751257,0,10.9514672630871,36.0214925388016,5.52539685409922,13.9310378409594,13.7157101517221,0.236613600079688,0,0,0,0,0,0,0,0,0,15.426595118379,41.9805491558028,77.9146170343372,0,0,2.36315962672562,0,0,6.17644117074692,0.219500570817251,0,0,0.0925884451585296,4.56131627434455,5.19967392639789,7.21656710126366,1.15930404975077,12.0930955062896,0.144366447761074,0,0,0,0,0,0,0,0,3.52762469217605,0.283550194484773,0,0,1.53353071666084,0,0,0,0,0,0.126995788584338,0,0,1.71072446022705,1.33675740514321,0,0,6.839996145067,13.5147621338317,10.4873748723959,15.7711493224489,53.6484668777824,28.740293586904,22.3388017931291,20.8014873822732,6.43018435655355,9.92943924162948,8.25908754949908,46.7538039262143,126.973455661598,24.6972101034231,10.7492940816933,31.274491489344,15.8390374586686,3.01439377059586,1.74306691720059,2.29937879718731,0,0,0,35.7041034682458,57.4309679170569,5.70547620162874,7.23906533337896,9.04095819221687,2.14873155887875,0,0,0,0,1.27047312111232,0,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0,10.0607023209695,12.5042630264919,5.42530047399471,157.641913040352,158.44494205188,95.4099610955305,35.4938487427921,37.0163702665094,34.1111256083977,14.4862299809507,20.5909935545985,18.2525476856286,9.90473204936145,32.1113898238895,53.1872306906827,0,0,0,1.81876542867756,38.2801510874143,28.7270778663196,55.3280411435872,26.3954594055467,113.947998339828,73.5518716727724,33.2609711893357,100.533700714755,20.7785293022987,16.1920178492788,31.4284253804235,7.1450625732014,14.5391240171414,13.2479831444354,0,0.802025881213139,0,18.8295694989955,26.9494928649941,29.2407445359516,0,0.0770153371044148,3.13739907670742,0,0.105551628892876,0,0,4.75015015424707,7.71136263451447,5.41892875087706,14.0473136679359,0,0.831076008928724,0.671624264166535,0,0,0,0.656029291399411,0.325378394664303,0.721287081534056,7.96654343919588,3.4653989966647,2.29706215198469,4.55042172225565,16.068392984416,8.7970353645831,3.54311819363682,4.91211759123615,3.72158745708233,10.3123435073543,13.7765859218517,4.43178462563725,55.9121183861511,0.330569830721956,1.53752053892085,0.382838137483752,0.6069466851333,19.523513070486,102.314012719958,3.485186350803,7.39280592422613,2.12922412126809,0,4.44778125849408,1.28812398067792,4.46590043231601,8.85862389212432,23.8287742404781,20.4718233049067,12.4102306529837,4.77304871888905,10.9892809627892,12.4111995732487,28.0027770330776,13.3128014650626,3.23491970517306,6.34041284692033,5.47635993110675,24.3816869544795,10.2359665645139,2.11300293513511,14.6054905206545,52.0371989589663,22.6016233240486,9.92457618383023,5.30751180192976,1.75380354101505,17.9420415622673,19.0209478093524,6.29022168584383,4.02770547529675,5.63391205064483,9.4651492454674,16.4075898491912,8.56010523555001,2.12856638442359,25.9662391416127,26.3435914367921,6.45104395401716,8.04849856563461,0,1.34060455107157,0,0.847294206991012,0,0,0,0,0,0,0,0,0,0,0,0,0.640944426764839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31857361344705,0,0,0.284136146806413,0.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| ||
|short_description=p11@COL1A1 | |short_description=p11@COL1A1 | ||
}} | }} |
Latest revision as of 00:06, 16 September 2015
Short description: | p11@COL1A1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_COL1A1_5end |
Coexpression cluster: | C59_Smooth_Fibroblast_Mesenchymal_tenocyte_Ewing_skin_hepatic |
Association with transcript: | -225bp_to_ENST00000510710_5end |
EntrezGene: | COL1A1 |
HGNC: | 2197 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.45e-26 | 76 |
muscle precursor cell | 1.43e-18 | 58 |
myoblast | 1.43e-18 | 58 |
multi-potent skeletal muscle stem cell | 1.43e-18 | 58 |
muscle cell | 7.22e-18 | 55 |
multi fate stem cell | 6.85e-16 | 427 |
somatic stem cell | 7.83e-15 | 433 |
electrically responsive cell | 2.51e-14 | 61 |
electrically active cell | 2.51e-14 | 61 |
smooth muscle cell | 1.18e-13 | 43 |
smooth muscle myoblast | 1.18e-13 | 43 |
stem cell | 1.72e-13 | 441 |
vascular associated smooth muscle cell | 6.33e-09 | 32 |
preadipocyte | 1.15e-08 | 12 |
stromal cell | 2.93e-08 | 28 |
mesodermal cell | 6.60e-08 | 121 |
skin fibroblast | 1.68e-07 | 23 |
connective tissue cell | 1.91e-07 | 361 |
extracellular matrix secreting cell | 1.91e-07 | 15 |
cardiocyte | 4.91e-07 | 16 |