FFCP PHASE1:Hg19::chr3:150690809..150690822,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(7 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7401 | |EntrezGene=7401 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12605 | |HGNC=12605 | ||
|TSSclassifier=strong | |||
|UniProt=P58418,E1ACU9 | |UniProt=P58418,E1ACU9 | ||
|association_with_transcript=-23bp_to_ENST00000327047,NM_001195794,NM_174878,uc003eyk.1_5end | |association_with_transcript=-23bp_to_ENST00000327047,NM_001195794,NM_174878,uc003eyk.1_5end | ||
|cluster_id=chr3:150690809..150690822,- | |||
|coexpression_cluster_id=C369 | |||
|description=CAGE_peak_3_at_CLRN1_5end | |description=CAGE_peak_3_at_CLRN1_5end | ||
|id=chr3:150690809..150690822,- | |id=chr3:150690809..150690822,- | ||
|ontology_enrichment_celltype=CL:0000064!5.76e-23!3;CL:0005012!5.76e-23!3;CL:0000067!5.76e-23!3;CL:0002304!5.76e-23!3;CL:0000075!2.27e-15!27;CL:0002322!4.69e-14!5;CL:0000710!1.76e-13!20;CL:0002077!2.73e-08!33;CL:0000148!1.73e-07!10;CL:0000541!1.73e-07!10;CL:0000133!8.62e-07!59 | |ontology_enrichment_celltype=CL:0000064!5.76e-23!3;CL:0005012!5.76e-23!3;CL:0000067!5.76e-23!3;CL:0002304!5.76e-23!3;CL:0000075!2.27e-15!27;CL:0002322!4.69e-14!5;CL:0000710!1.76e-13!20;CL:0002077!2.73e-08!33;CL:0000148!1.73e-07!10;CL:0000541!1.73e-07!10;CL:0000133!8.62e-07!59 | ||
|ontology_enrichment_celltype_v019=CL:0000064;5.96e-34;3!CL:0000067;5.96e-34;3!CL:0005012;5.96e-34;3!CL:0002304;5.96e-34;3!CL:0000306;5.56e-26;4!CL:0002222;5.56e-26;4!CL:0002224;5.56e-26;4!CL:0000075;6.71e-16;27 | |||
|ontology_enrichment_celltype_v019_2=CL:0000064,5.96e-34,3;CL:0000067,5.96e-34,3;CL:0005012,5.96e-34,3;CL:0002304,5.96e-34,3;CL:0000306,5.56e-26,4;CL:0002222,5.56e-26,4;CL:0002224,5.56e-26,4;CL:0000075,6.71e-16,27 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2355!4.44e-18!1;DOID:74!1.03e-09!2;DOID:0060058!1.52e-07!10 | |ontology_enrichment_disease=DOID:2355!4.44e-18!1;DOID:74!1.03e-09!2;DOID:0060058!1.52e-07!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!5.76e-23!3;UBERON:0001775!5.76e-23!3;UBERON:0000970!7.01e-21!20;UBERON:0002104!6.80e-20!21;UBERON:0000020!3.55e-18!23;UBERON:0000488!1.71e-17!4;UBERON:0001032!2.00e-17!24;UBERON:0004456!2.00e-17!24;UBERON:0000019!2.37e-14!19;UBERON:0000047!2.37e-14!19;UBERON:0004088!2.37e-14!19;UBERON:0003072!2.37e-14!19;UBERON:0003071!2.37e-14!19;UBERON:0004128!2.37e-14!19;UBERON:0007625!2.82e-14!11;UBERON:0001456!5.10e-13!21;UBERON:0002203!5.37e-12!6;UBERON:0001768!5.37e-12!6;UBERON:0001801!2.36e-11!14;UBERON:0000007!1.33e-09!2;UBERON:0005085!1.64e-09!29;UBERON:0002200!5.98e-07!11;UBERON:0006876!5.98e-07!11;UBERON:0003056!9.78e-07!61 | |ontology_enrichment_uberon=UBERON:0001778!5.76e-23!3;UBERON:0001775!5.76e-23!3;UBERON:0000970!7.01e-21!20;UBERON:0002104!6.80e-20!21;UBERON:0000020!3.55e-18!23;UBERON:0000488!1.71e-17!4;UBERON:0001032!2.00e-17!24;UBERON:0004456!2.00e-17!24;UBERON:0000019!2.37e-14!19;UBERON:0000047!2.37e-14!19;UBERON:0004088!2.37e-14!19;UBERON:0003072!2.37e-14!19;UBERON:0003071!2.37e-14!19;UBERON:0004128!2.37e-14!19;UBERON:0007625!2.82e-14!11;UBERON:0001456!5.10e-13!21;UBERON:0002203!5.37e-12!6;UBERON:0001768!5.37e-12!6;UBERON:0001801!2.36e-11!14;UBERON:0000007!1.33e-09!2;UBERON:0005085!1.64e-09!29;UBERON:0002200!5.98e-07!11;UBERON:0006876!5.98e-07!11;UBERON:0003056!9.78e-07!61 | ||
|ontology_enrichment_uberon_v019=UBERON:0007625;6.80e-37;11!UBERON:0001778;5.96e-34;3!UBERON:0001775;5.96e-34;3!UBERON:0001801;2.55e-29;14!UBERON:0010077;5.56e-26;4!UBERON:0005389;5.56e-26;4!UBERON:0000484;5.56e-26;4!UBERON:0000965;5.56e-26;4!UBERON:0001803;5.56e-26;4!UBERON:0000488;7.14e-26;4!UBERON:0000019;5.37e-22;19!UBERON:0000047;5.37e-22;19!UBERON:0004088;5.37e-22;19!UBERON:0010230;5.37e-22;19!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0001456;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0002203;9.07e-18;6!UBERON:0001768;9.07e-18;6!UBERON:0002200;9.07e-18;6!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24!UBERON:0010371;1.90e-14;31!UBERON:0006876;2.37e-10;11!UBERON:0000033;1.92e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007625,6.80e-37,11;UBERON:0001778,5.96e-34,3;UBERON:0001775,5.96e-34,3;UBERON:0001801,2.55e-29,14;UBERON:0010077,5.56e-26,4;UBERON:0005389,5.56e-26,4;UBERON:0000484,5.56e-26,4;UBERON:0002546,5.56e-26,4;UBERON:0000965,5.56e-26,4;UBERON:0001803,5.56e-26,4;UBERON:0003073,5.56e-26,4;UBERON:0005426,5.56e-26,4;UBERON:0000488,7.14e-26,4;UBERON:0000019,5.71e-21,20;UBERON:0000047,5.71e-21,20;UBERON:0010312,5.71e-21,20;UBERON:0004088,5.71e-21,20;UBERON:0010230,5.71e-21,20;UBERON:0003072,5.71e-21,20;UBERON:0004128,5.71e-21,20;UBERON:0003071,5.71e-21,20;UBERON:0000970,4.86e-20,21;UBERON:0002104,4.86e-20,21;UBERON:0001456,3.41e-19,22;UBERON:0002203,9.07e-18,6;UBERON:0001768,9.07e-18,6;UBERON:0002200,9.07e-18,6;UBERON:0000020,1.03e-17,24;UBERON:0001032,1.03e-17,24;UBERON:0004456,1.03e-17,24;UBERON:0005085,5.04e-14,31;UBERON:0000076,9.39e-14,8;UBERON:0006876,2.37e-10,11;UBERON:0001444,2.38e-09,49;UBERON:0000033,2.46e-08,56;UBERON:0000153,1.20e-07,62;UBERON:0007811,1.20e-07,62;UBERON:0003056,1.20e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17430079477356,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.17430079477356,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,5.79652024875384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451961481561065,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.423366660328922,0,0,0,0,0.415440338029185,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0999411559249289,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18378979906969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p3@CLRN1 | |short_description=p3@CLRN1 | ||
}} | }} |
Latest revision as of 00:23, 16 September 2015
Short description: | p3@CLRN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_CLRN1_5end |
Coexpression cluster: | C369_Lens_eye_Ciliary_retina_H9_Retinal_Renal |
Association with transcript: | -23bp_to_ENST00000327047, NM_001195794, NM_174878, uc003eyk.1_5end |
EntrezGene: | CLRN1 |
HGNC: | 12605 |
UniProt: | P58418E1ACU9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
ciliated cell | 5.96e-34 | 3 |
ciliated epithelial cell | 5.96e-34 | 3 |
multi-ciliated epithelial cell | 5.96e-34 | 3 |
non-pigmented ciliary epithelial cell | 5.96e-34 | 3 |
crystallin accumulating cell | 5.56e-26 | 4 |
vertebrate lens cell | 5.56e-26 | 4 |
lens epithelial cell | 5.56e-26 | 4 |
columnar/cuboidal epithelial cell | 6.71e-16 | 27 |