FFCP PHASE1:Hg19::chr4:149363544..149363583,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4306 | |EntrezGene=4306 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7979 | |HGNC=7979 | ||
|TSSclassifier=strong | |||
|UniProt=B0ZBF8 | |UniProt=B0ZBF8 | ||
|association_with_transcript=-21bp_to_ENST00000342437_5end | |association_with_transcript=-21bp_to_ENST00000342437_5end | ||
|cluster_id=chr4:149363544..149363583,- | |||
|description=CAGE_peak_3_at_NR3C2_5end | |description=CAGE_peak_3_at_NR3C2_5end | ||
|id=chr4:149363544..149363583,- | |id=chr4:149363544..149363583,- | ||
|ontology_enrichment_celltype=CL:0000791!3.93e-09!18;CL:0000789!3.93e-09!18;CL:0002420!3.93e-09!18;CL:0002419!3.93e-09!18;CL:0000790!3.93e-09!18;CL:0000625!1.34e-07!11;CL:0000084!8.31e-07!25;CL:0000827!8.31e-07!25 | |ontology_enrichment_celltype=CL:0000791!3.93e-09!18;CL:0000789!3.93e-09!18;CL:0002420!3.93e-09!18;CL:0002419!3.93e-09!18;CL:0000790!3.93e-09!18;CL:0000625!1.34e-07!11;CL:0000084!8.31e-07!25;CL:0000827!8.31e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000791;5.85e-14;18!CL:0000789;5.85e-14;18!CL:0002419;5.85e-14;18!CL:0000625;8.16e-11;11!CL:0000084;9.74e-11;25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,2.14e-14,18;CL:0000789,2.14e-14,18;CL:0002420,2.14e-14,18;CL:0002419,2.14e-14,18;CL:0000790,2.14e-14,18;CL:0000625,2.29e-11,11;CL:0000084,5.58e-11,25;CL:0000827,5.58e-11,25;CL:0000838,1.76e-07,52;CL:0000542,3.33e-07,53;CL:0000051,3.33e-07,53 | |||
|ontology_enrichment_development_v019=CL:0000790;5.85e-14;18!UBERON:0006601;1.83e-08;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.88e-45!115;UBERON:0001049!2.44e-17!57;UBERON:0005068!2.44e-17!57;UBERON:0006241!2.44e-17!57;UBERON:0007135!2.44e-17!57;UBERON:0003075!2.20e-13!86;UBERON:0007284!2.20e-13!86;UBERON:0000955!6.43e-13!69;UBERON:0006238!6.43e-13!69;UBERON:0002616!8.77e-13!59;UBERON:0002346!1.33e-12!90;UBERON:0003080!1.98e-12!42;UBERON:0001017!3.80e-12!82;UBERON:0002780!5.32e-12!41;UBERON:0001890!5.32e-12!41;UBERON:0006240!5.32e-12!41;UBERON:0005743!6.65e-12!86;UBERON:0001893!3.68e-10!34;UBERON:0000073!4.33e-10!94;UBERON:0001016!4.33e-10!94;UBERON:0002020!8.22e-10!34;UBERON:0003528!8.22e-10!34;UBERON:0002791!1.21e-09!33;UBERON:0001869!3.86e-09!32;UBERON:0003056!6.32e-09!61;UBERON:0001950!3.00e-08!20;UBERON:0002619!5.54e-08!22;UBERON:0000025!1.36e-07!194;UBERON:0004111!8.27e-07!241;UBERON:0000153!8.31e-07!129;UBERON:0007811!8.31e-07!129 | |ontology_enrichment_uberon=UBERON:0007023!2.88e-45!115;UBERON:0001049!2.44e-17!57;UBERON:0005068!2.44e-17!57;UBERON:0006241!2.44e-17!57;UBERON:0007135!2.44e-17!57;UBERON:0003075!2.20e-13!86;UBERON:0007284!2.20e-13!86;UBERON:0000955!6.43e-13!69;UBERON:0006238!6.43e-13!69;UBERON:0002616!8.77e-13!59;UBERON:0002346!1.33e-12!90;UBERON:0003080!1.98e-12!42;UBERON:0001017!3.80e-12!82;UBERON:0002780!5.32e-12!41;UBERON:0001890!5.32e-12!41;UBERON:0006240!5.32e-12!41;UBERON:0005743!6.65e-12!86;UBERON:0001893!3.68e-10!34;UBERON:0000073!4.33e-10!94;UBERON:0001016!4.33e-10!94;UBERON:0002020!8.22e-10!34;UBERON:0003528!8.22e-10!34;UBERON:0002791!1.21e-09!33;UBERON:0001869!3.86e-09!32;UBERON:0003056!6.32e-09!61;UBERON:0001950!3.00e-08!20;UBERON:0002619!5.54e-08!22;UBERON:0000025!1.36e-07!194;UBERON:0004111!8.27e-07!241;UBERON:0000153!8.31e-07!129;UBERON:0007811!8.31e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0007023;7.96e-17;114!UBERON:0002780;4.02e-14;41!UBERON:0001890;4.02e-14;41!UBERON:0001893;2.09e-13;34!UBERON:0000073;4.06e-13;53!UBERON:0002616;4.06e-13;53!UBERON:0002791;1.27e-12;32!UBERON:0003528;1.30e-12;34!UBERON:0002020;1.30e-12;34!UBERON:0001869;1.94e-12;32!UBERON:0001950;6.93e-11;20!UBERON:0002619;7.18e-11;22!UBERON:0000956;5.42e-09;25!UBERON:0000203;5.42e-09;25!UBERON:0001017;2.01e-08;75!UBERON:0002420;3.55e-08;9!UBERON:0000125;3.55e-08;9!UBERON:0007245;3.55e-08;9!UBERON:0002308;3.55e-08;9!UBERON:0010009;3.55e-08;9!UBERON:0010011;3.55e-08;9!UBERON:0000454;3.55e-08;9!UBERON:0000955;1.37e-07;68!UBERON:0009663;6.16e-07;7 | |||
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| ||
|short_description=p3@NR3C2 | |short_description=p3@NR3C2 | ||
}} | }} |
Latest revision as of 00:47, 16 September 2015
Short description: | p3@NR3C2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_NR3C2_5end |
Coexpression cluster: | NA |
Association with transcript: | -21bp_to_ENST00000342437_5end |
EntrezGene: | NR3C2 |
HGNC: | 7979 |
UniProt: | B0ZBF8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 2.14e-14 | 18 |
alpha-beta T cell | 2.14e-14 | 18 |
immature T cell | 2.14e-14 | 18 |
mature T cell | 2.14e-14 | 18 |
immature alpha-beta T cell | 2.14e-14 | 18 |
CD8-positive, alpha-beta T cell | 2.29e-11 | 11 |
T cell | 5.58e-11 | 25 |
pro-T cell | 5.58e-11 | 25 |
lymphoid lineage restricted progenitor cell | 1.76e-07 | 52 |
lymphocyte | 3.33e-07 | 53 |
common lymphoid progenitor | 3.33e-07 | 53 |